Protein–RNA interactions for Protein: O00635

TRIM38, E3 ubiquitin-protein ligase TRIM38, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM38O00635 SNORD14A-201ENST00000606526 91 ntBASIC2.51□□□□□ -2.01
TRIM38O00635 AC068700.1-201ENST00000565862 3754 ntBASIC2.51□□□□□ -2.01
TRIM38O00635 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC2.51□□□□□ -2.01
TRIM38O00635 TAB2-201ENST00000367456 4553 ntAPPRIS P1 TSL 5 BASIC2.51□□□□□ -2.01
TRIM38O00635 ANKRD30BP1-201ENST00000451052 2186 ntBASIC2.5□□□□□ -2.01
TRIM38O00635 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC2.5□□□□□ -2.01
TRIM38O00635 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC2.5□□□□□ -2.01
TRIM38O00635 ZNF658B-202ENST00000615961 3375 ntBASIC2.5□□□□□ -2.01
TRIM38O00635 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
TRIM38O00635 Y_RNA.71-201ENST00000362892 104 ntBASIC2.5□□□□□ -2.01
TRIM38O00635 U8.2-201ENST00000363156 134 ntBASIC2.5□□□□□ -2.01
TRIM38O00635 Y_RNA.127-201ENST00000363386 109 ntBASIC2.5□□□□□ -2.01
TRIM38O00635 Y_RNA.332-201ENST00000365271 113 ntBASIC2.5□□□□□ -2.01
TRIM38O00635 MIR518C-201ENST00000384822 101 ntBASIC2.5□□□□□ -2.01
TRIM38O00635 MIR27B-201ENST00000385129 97 ntBASIC2.5□□□□□ -2.01
TRIM38O00635 MIR29C-201ENST00000385231 88 ntBASIC2.5□□□□□ -2.01
TRIM38O00635 RN7SKP192-201ENST00000411291 327 ntBASIC2.5□□□□□ -2.01
TRIM38O00635 AL157709.1-201ENST00000412695 424 ntTSL 3 BASIC2.5□□□□□ -2.01
TRIM38O00635 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC2.5□□□□□ -2.01
TRIM38O00635 MTND4LP9-201ENST00000427694 174 ntBASIC2.5□□□□□ -2.01
TRIM38O00635 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC2.5□□□□□ -2.01
TRIM38O00635 RNU7-14P-201ENST00000459331 62 ntBASIC2.5□□□□□ -2.01
TRIM38O00635 Y_RNA.637-201ENST00000459424 114 ntBASIC2.5□□□□□ -2.01
TRIM38O00635 ATP5EP1-201ENST00000510257 156 ntBASIC2.5□□□□□ -2.01
TRIM38O00635 RNU6-1333P-201ENST00000516162 93 ntBASIC2.5□□□□□ -2.01
TRIM38O00635 RNA5SP402-201ENST00000517148 110 ntBASIC2.5□□□□□ -2.01
TRIM38O00635 AL137847.3-201ENST00000611521 109 ntBASIC2.5□□□□□ -2.01
TRIM38O00635 AC245884.12-201ENST00000615364 59 ntBASIC2.5□□□□□ -2.01
TRIM38O00635 U4.3-201ENST00000621047 82 ntBASIC2.5□□□□□ -2.01
TRIM38O00635 AC091932.3-201ENST00000624223 323 ntBASIC2.5□□□□□ -2.01
TRIM38O00635 AC008873.1-201ENST00000625051 138 ntBASIC2.5□□□□□ -2.01
TRIM38O00635 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC2.5□□□□□ -2.01
TRIM38O00635 Y_RNA.121-201ENST00000363309 113 ntBASIC2.49□□□□□ -2.01
TRIM38O00635 Y_RNA.357-201ENST00000365487 109 ntBASIC2.49□□□□□ -2.01
TRIM38O00635 RNU4-17P-201ENST00000365598 141 ntBASIC2.49□□□□□ -2.01
TRIM38O00635 SNORD14D-201ENST00000384390 87 ntBASIC2.49□□□□□ -2.01
TRIM38O00635 SNORA20-201ENST00000384662 132 ntBASIC2.49□□□□□ -2.01
TRIM38O00635 SNORA40-201ENST00000388090 126 ntBASIC2.49□□□□□ -2.01
TRIM38O00635 Y_RNA.595-201ENST00000410403 105 ntBASIC2.49□□□□□ -2.01
TRIM38O00635 ELOCP21-201ENST00000412558 336 ntBASIC2.49□□□□□ -2.01
TRIM38O00635 RAB28P5-201ENST00000427490 651 ntBASIC2.49□□□□□ -2.01
TRIM38O00635 CR769767.1-201ENST00000436337 346 ntBASIC2.49□□□□□ -2.01
TRIM38O00635 HMGN2P18-201ENST00000450680 270 ntBASIC2.49□□□□□ -2.01
TRIM38O00635 RNU6-625P-201ENST00000459412 107 ntBASIC2.49□□□□□ -2.01
TRIM38O00635 RNU7-121P-201ENST00000516604 62 ntBASIC2.49□□□□□ -2.01
TRIM38O00635 RNU6-919P-201ENST00000516731 104 ntBASIC2.49□□□□□ -2.01
TRIM38O00635 RNU6-1234P-201ENST00000516877 103 ntBASIC2.49□□□□□ -2.01
TRIM38O00635 AC100767.1-201ENST00000528178 123 ntBASIC2.49□□□□□ -2.01
TRIM38O00635 AC018448.1-201ENST00000552843 316 ntBASIC2.49□□□□□ -2.01
TRIM38O00635 MIR548X2-201ENST00000579776 100 ntBASIC2.49□□□□□ -2.01
TRIM38O00635 MIR3684-201ENST00000579779 74 ntBASIC2.49□□□□□ -2.01
TRIM38O00635 MIR5194-201ENST00000582634 120 ntBASIC2.49□□□□□ -2.01
TRIM38O00635 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC2.49□□□□□ -2.01
TRIM38O00635 SNORD11B-201ENST00000607707 90 ntBASIC2.49□□□□□ -2.01
TRIM38O00635 AC010999.1-201ENST00000611856 324 ntBASIC2.49□□□□□ -2.01
TRIM38O00635 AC004467.1-201ENST00000615678 330 ntBASIC2.49□□□□□ -2.01
TRIM38O00635 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC2.49□□□□□ -2.01
TRIM38O00635 MIR3658-201ENST00000636291 56 ntBASIC2.49□□□□□ -2.01
TRIM38O00635 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC2.48□□□□□ -2.01
TRIM38O00635 RNU6-743P-201ENST00000364151 106 ntBASIC2.48□□□□□ -2.01
TRIM38O00635 SNORD114-30-201ENST00000364448 72 ntBASIC2.48□□□□□ -2.01
TRIM38O00635 RNU6-275P-201ENST00000364910 107 ntBASIC2.48□□□□□ -2.01
TRIM38O00635 SNORA72.2-201ENST00000365028 127 ntBASIC2.48□□□□□ -2.01
TRIM38O00635 MIR524-201ENST00000385242 87 ntBASIC2.48□□□□□ -2.01
TRIM38O00635 RNU6-239P-201ENST00000390990 99 ntBASIC2.48□□□□□ -2.01
TRIM38O00635 AC004866.1-201ENST00000411748 78 ntBASIC2.48□□□□□ -2.01
TRIM38O00635 Z98742.3-201ENST00000418637 326 ntBASIC2.48□□□□□ -2.01
TRIM38O00635 AC010154.1-201ENST00000425857 269 ntBASIC2.48□□□□□ -2.01
TRIM38O00635 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC2.48□□□□□ -2.01
TRIM38O00635 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC2.48□□□□□ -2.01
TRIM38O00635 RNU6-991P-201ENST00000516168 107 ntBASIC2.48□□□□□ -2.01
TRIM38O00635 SNORA25.12-201ENST00000516202 82 ntBASIC2.48□□□□□ -2.01
TRIM38O00635 RNU6-155P-201ENST00000516347 100 ntBASIC2.48□□□□□ -2.01
TRIM38O00635 PRELID2P1-201ENST00000552837 301 ntBASIC2.48□□□□□ -2.01
TRIM38O00635 AL031274.2-201ENST00000599419 203 ntBASIC2.48□□□□□ -2.01
TRIM38O00635 WARS-244ENST00000627608 123 ntTSL 5 BASIC2.48□□□□□ -2.01
TRIM38O00635 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC2.48□□□□□ -2.01
TRIM38O00635 ZNF280D-204ENST00000558320 3666 ntTSL 1 (best) BASIC2.48□□□□□ -2.01
TRIM38O00635 MTND5P35-201ENST00000557537 1720 ntBASIC2.48□□□□□ -2.01
TRIM38O00635 FGF7-201ENST00000267843 5467 ntAPPRIS P1 TSL 1 (best) BASIC2.48□□□□□ -2.01
TRIM38O00635 AC009487.4-201ENST00000624969 3585 ntBASIC2.48□□□□□ -2.01
TRIM38O00635 RNU6-1325P-201ENST00000364905 105 ntBASIC2.47□□□□□ -2.01
TRIM38O00635 RNU4-11P-201ENST00000365287 132 ntBASIC2.47□□□□□ -2.01
TRIM38O00635 RNU6-438P-201ENST00000365561 103 ntBASIC2.47□□□□□ -2.01
TRIM38O00635 SNORD116-14-201ENST00000383894 92 ntBASIC2.47□□□□□ -2.01
TRIM38O00635 SNORD116-17-201ENST00000383929 92 ntBASIC2.47□□□□□ -2.01
TRIM38O00635 RNU6-793P-201ENST00000384233 104 ntBASIC2.47□□□□□ -2.01
TRIM38O00635 SNORD116-15-201ENST00000384445 92 ntBASIC2.47□□□□□ -2.01
TRIM38O00635 SNORD116-19-201ENST00000384729 92 ntBASIC2.47□□□□□ -2.01
TRIM38O00635 MIR586-201ENST00000385035 97 ntBASIC2.47□□□□□ -2.01
TRIM38O00635 RNU6-763P-201ENST00000390865 106 ntBASIC2.47□□□□□ -2.01
TRIM38O00635 RNU6-381P-201ENST00000391259 108 ntBASIC2.47□□□□□ -2.01
TRIM38O00635 RNU4-53P-201ENST00000410828 140 ntBASIC2.47□□□□□ -2.01
TRIM38O00635 RNA5SP270-201ENST00000411361 118 ntBASIC2.47□□□□□ -2.01
TRIM38O00635 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC2.47□□□□□ -2.01
TRIM38O00635 AL135786.1-201ENST00000415892 214 ntBASIC2.47□□□□□ -2.01
TRIM38O00635 AC123900.1-201ENST00000420390 96 ntBASIC2.47□□□□□ -2.01
TRIM38O00635 AL135790.2-201ENST00000437701 267 ntBASIC2.47□□□□□ -2.01
TRIM38O00635 U8.19-201ENST00000459095 133 ntBASIC2.47□□□□□ -2.01
TRIM38O00635 AL359881.1-201ENST00000602916 267 ntBASIC2.47□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 114 ms