Protein–RNA interactions for Protein: A7XYQ1

SOBP, Sine oculis-binding protein homolog, humanhuman

Predictions only

Length 873 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOBPA7XYQ1 FOXP2-227ENST00000638397 240 ntTSL 5 BASIC3.75□□□□□ -1.81
SOBPA7XYQ1 FIGNL1-201ENST00000356889 3471 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
SOBPA7XYQ1 CNOT2-231ENST00000551483 4753 ntTSL 2 BASIC3.75□□□□□ -1.81
SOBPA7XYQ1 POSTN-203ENST00000379747 3373 ntAPPRIS P3 TSL 1 (best) BASIC3.75□□□□□ -1.81
SOBPA7XYQ1 PHTF2-202ENST00000275575 4541 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
SOBPA7XYQ1 CNTN6-201ENST00000350110 3814 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
SOBPA7XYQ1 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
SOBPA7XYQ1 ATP13A3-203ENST00000439040 7720 ntAPPRIS P1 TSL 5 BASIC3.74□□□□□ -1.81
SOBPA7XYQ1 SYNE1-207ENST00000367255 27748 ntAPPRIS P4 TSL 1 (best) BASIC3.74□□□□□ -1.81
SOBPA7XYQ1 MBD5-212ENST00000627651 5610 ntTSL 5 BASIC3.74□□□□□ -1.81
SOBPA7XYQ1 RNU6-661P-201ENST00000362409 107 ntBASIC3.74□□□□□ -1.81
SOBPA7XYQ1 SNORD115-19-201ENST00000363098 82 ntBASIC3.74□□□□□ -1.81
SOBPA7XYQ1 SNORD115-18-201ENST00000363293 82 ntBASIC3.74□□□□□ -1.81
SOBPA7XYQ1 RNU1-33P-201ENST00000364249 162 ntBASIC3.74□□□□□ -1.81
SOBPA7XYQ1 SNORD115-17-201ENST00000364612 82 ntBASIC3.74□□□□□ -1.81
SOBPA7XYQ1 SNORA2.2-201ENST00000365473 135 ntBASIC3.74□□□□□ -1.81
SOBPA7XYQ1 Y_RNA.454-201ENST00000384224 113 ntBASIC3.74□□□□□ -1.81
SOBPA7XYQ1 MIR147B-201ENST00000390185 80 ntBASIC3.74□□□□□ -1.81
SOBPA7XYQ1 RNU2-49P-201ENST00000410666 184 ntBASIC3.74□□□□□ -1.81
SOBPA7XYQ1 Y_RNA.620-201ENST00000411009 88 ntBASIC3.74□□□□□ -1.81
SOBPA7XYQ1 BTF3P4-201ENST00000418852 495 ntBASIC3.74□□□□□ -1.81
SOBPA7XYQ1 AC010099.1-201ENST00000455434 375 ntBASIC3.74□□□□□ -1.81
SOBPA7XYQ1 SNRPGP5-201ENST00000456003 220 ntBASIC3.74□□□□□ -1.81
SOBPA7XYQ1 snoU13.28-201ENST00000459235 104 ntBASIC3.74□□□□□ -1.81
SOBPA7XYQ1 AC113410.1-201ENST00000505029 247 ntBASIC3.74□□□□□ -1.81
SOBPA7XYQ1 AC007598.2-201ENST00000569490 539 ntTSL 3 BASIC3.74□□□□□ -1.81
SOBPA7XYQ1 MIR4305-201ENST00000583252 102 ntBASIC3.74□□□□□ -1.81
SOBPA7XYQ1 AC006386.2-201ENST00000624491 75 ntBASIC3.74□□□□□ -1.81
SOBPA7XYQ1 AC012005.1-201ENST00000624575 75 ntBASIC3.74□□□□□ -1.81
SOBPA7XYQ1 SMC1B-201ENST00000357450 4201 ntAPPRIS P1 TSL 5 BASIC3.74□□□□□ -1.81
SOBPA7XYQ1 CCDC146-201ENST00000285871 3333 ntAPPRIS P2 TSL 1 (best) BASIC3.74□□□□□ -1.81
SOBPA7XYQ1 ABCA5-208ENST00000588877 6525 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
SOBPA7XYQ1 AC010889.1-201ENST00000566193 2666 ntBASIC3.74□□□□□ -1.81
SOBPA7XYQ1 ABCA12-202ENST00000389661 7005 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
SOBPA7XYQ1 FNBP1L-203ENST00000370253 3889 ntAPPRIS ALT1 TSL 5 BASIC3.73□□□□□ -1.81
SOBPA7XYQ1 RNU6-363P-201ENST00000362895 105 ntBASIC3.73□□□□□ -1.81
SOBPA7XYQ1 RNU1-72P-201ENST00000362976 153 ntBASIC3.73□□□□□ -1.81
SOBPA7XYQ1 RNU6-60P-201ENST00000364792 103 ntBASIC3.73□□□□□ -1.81
SOBPA7XYQ1 SNORD6-201ENST00000365444 73 ntBASIC3.73□□□□□ -1.81
SOBPA7XYQ1 RNU6-1189P-201ENST00000383958 107 ntBASIC3.73□□□□□ -1.81
SOBPA7XYQ1 AL138900.2-201ENST00000434098 156 ntTSL 3 BASIC3.73□□□□□ -1.81
SOBPA7XYQ1 RPS29P21-201ENST00000496272 170 ntBASIC3.73□□□□□ -1.81
SOBPA7XYQ1 RNU6-162P-201ENST00000516228 103 ntBASIC3.73□□□□□ -1.81
SOBPA7XYQ1 RNU6-795P-201ENST00000516323 103 ntBASIC3.73□□□□□ -1.81
SOBPA7XYQ1 RNU6-267P-201ENST00000516714 103 ntBASIC3.73□□□□□ -1.81
SOBPA7XYQ1 RNU6-1096P-201ENST00000517089 102 ntBASIC3.73□□□□□ -1.81
SOBPA7XYQ1 AC025271.3-201ENST00000563031 255 ntTSL 5 BASIC3.73□□□□□ -1.81
SOBPA7XYQ1 AC130469.1-201ENST00000597256 388 ntTSL 5 BASIC3.73□□□□□ -1.81
SOBPA7XYQ1 AL359075.3-201ENST00000613288 217 ntBASIC3.73□□□□□ -1.81
SOBPA7XYQ1 SLC6A15-203ENST00000450363 4229 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
SOBPA7XYQ1 PCDH15-208ENST00000395432 6901 ntTSL 5 BASIC3.73□□□□□ -1.81
SOBPA7XYQ1 RNF38-203ENST00000353739 4945 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
SOBPA7XYQ1 RAP2C-AS1-202ENST00000441399 3473 ntTSL 2 BASIC3.73□□□□□ -1.81
SOBPA7XYQ1 AF117829.1-206ENST00000621883 3802 ntBASIC3.73□□□□□ -1.81
SOBPA7XYQ1 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC3.73□□□□□ -1.81
SOBPA7XYQ1 CLCA4-201ENST00000370563 3211 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
SOBPA7XYQ1 ZNF804B-202ENST00000611114 3968 ntTSL 5 BASIC3.72□□□□□ -1.81
SOBPA7XYQ1 HEATR5B-201ENST00000233099 6905 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
SOBPA7XYQ1 FOXP2-224ENST00000635534 4290 ntTSL 5 BASIC3.72□□□□□ -1.81
SOBPA7XYQ1 SNHG14-215ENST00000551631 4008 ntTSL 5 BASIC3.72□□□□□ -1.81
SOBPA7XYQ1 SGIP1-206ENST00000435165 3646 ntAPPRIS ALT2 TSL 2 BASIC3.72□□□□□ -1.81
SOBPA7XYQ1 RNU1-96P-201ENST00000364163 162 ntBASIC3.72□□□□□ -1.81
SOBPA7XYQ1 Y_RNA.360-201ENST00000365512 102 ntBASIC3.72□□□□□ -1.81
SOBPA7XYQ1 MIR184-201ENST00000384962 84 ntBASIC3.72□□□□□ -1.81
SOBPA7XYQ1 TRAJ59-201ENST00000390480 54 ntAPPRIS P1 BASIC3.72□□□□□ -1.81
SOBPA7XYQ1 SNRPGP10-201ENST00000432323 225 ntBASIC3.72□□□□□ -1.81
SOBPA7XYQ1 RNU1-131P-201ENST00000458943 161 ntBASIC3.72□□□□□ -1.81
SOBPA7XYQ1 RN7SL330P-201ENST00000469709 307 ntBASIC3.72□□□□□ -1.81
SOBPA7XYQ1 RNU2-58P-201ENST00000516403 183 ntBASIC3.72□□□□□ -1.81
SOBPA7XYQ1 AC008011.1-201ENST00000545989 227 ntBASIC3.72□□□□□ -1.81
SOBPA7XYQ1 MIR4777-201ENST00000583710 86 ntBASIC3.72□□□□□ -1.81
SOBPA7XYQ1 AC006023.1-201ENST00000603944 259 ntBASIC3.72□□□□□ -1.81
SOBPA7XYQ1 RNVU1-4-201ENST00000612985 164 ntBASIC3.72□□□□□ -1.81
SOBPA7XYQ1 MIR6076-201ENST00000617521 113 ntBASIC3.72□□□□□ -1.81
SOBPA7XYQ1 AC087741.2-201ENST00000619415 172 ntBASIC3.72□□□□□ -1.81
SOBPA7XYQ1 AC006160.2-201ENST00000637708 154 ntBASIC3.72□□□□□ -1.81
SOBPA7XYQ1 GABRG2-213ENST00000639046 3058 ntTSL 5 BASIC3.72□□□□□ -1.81
SOBPA7XYQ1 RAD17-202ENST00000305138 3164 ntTSL 1 (best) BASIC3.71□□□□□ -1.81
SOBPA7XYQ1 MINDY3-202ENST00000378036 2452 ntTSL 2 BASIC3.71□□□□□ -1.81
SOBPA7XYQ1 CEP44-201ENST00000296519 4173 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.81
SOBPA7XYQ1 ERBIN-203ENST00000380938 4701 ntTSL 2 BASIC3.71□□□□□ -1.82
SOBPA7XYQ1 CEP70-211ENST00000484888 1993 ntAPPRIS P3 TSL 5 BASIC3.71□□□□□ -1.82
SOBPA7XYQ1 Y_RNA.253-201ENST00000364562 112 ntBASIC3.71□□□□□ -1.82
SOBPA7XYQ1 RNU6-234P-201ENST00000365229 104 ntBASIC3.71□□□□□ -1.82
SOBPA7XYQ1 Y_RNA.531-201ENST00000384589 121 ntBASIC3.71□□□□□ -1.82
SOBPA7XYQ1 MIR1261-201ENST00000408659 82 ntBASIC3.71□□□□□ -1.82
SOBPA7XYQ1 MIR3618-201ENST00000580330 88 ntBASIC3.71□□□□□ -1.82
SOBPA7XYQ1 MIR4325-201ENST00000583049 90 ntBASIC3.71□□□□□ -1.82
SOBPA7XYQ1 MIR4672-201ENST00000583126 81 ntBASIC3.71□□□□□ -1.82
SOBPA7XYQ1 MIR4276-201ENST00000584832 70 ntBASIC3.71□□□□□ -1.82
SOBPA7XYQ1 RPL12P50-201ENST00000603116 116 ntBASIC3.71□□□□□ -1.82
SOBPA7XYQ1 YPEL5P2-201ENST00000605553 359 ntBASIC3.71□□□□□ -1.82
SOBPA7XYQ1 ATP2B1-203ENST00000393164 3127 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
SOBPA7XYQ1 RAD17-206ENST00000358030 2648 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
SOBPA7XYQ1 Y_RNA.190-201ENST00000363964 101 ntBASIC3.7□□□□□ -1.82
SOBPA7XYQ1 Y_RNA.377-201ENST00000365644 108 ntBASIC3.7□□□□□ -1.82
SOBPA7XYQ1 MIR1294-201ENST00000408503 142 ntBASIC3.7□□□□□ -1.82
SOBPA7XYQ1 AC010731.3-201ENST00000415029 566 ntTSL 4 BASIC3.7□□□□□ -1.82
SOBPA7XYQ1 U3.44-201ENST00000458938 192 ntBASIC3.7□□□□□ -1.82
SOBPA7XYQ1 AP002884.2-201ENST00000471647 395 ntBASIC3.7□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 115.9 ms