Protein–RNA interactions for Protein: U3KQE9

Uncharacterized protein (Fragment), humanhuman

Predictions only

Length 123 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
U3KQE9 MIR376A2-201ENST00000636782 80 ntBASIC2.83□□□□□ -1.96
U3KQE9 U6.108-201ENST00000637764 58 ntBASIC2.83□□□□□ -1.96
U3KQE9 BRCA2-206ENST00000544455 10984 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
U3KQE9 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC2.83□□□□□ -1.96
U3KQE9 TRIM36-201ENST00000282369 4050 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
U3KQE9 ARHGAP12-201ENST00000311380 4625 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
U3KQE9 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC2.83□□□□□ -1.96
U3KQE9 EPS15-202ENST00000371730 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC2.83□□□□□ -1.96
U3KQE9 SYNE1-207ENST00000367255 27748 ntAPPRIS P4 TSL 1 (best) BASIC2.83□□□□□ -1.96
U3KQE9 RAD17-206ENST00000358030 2648 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
U3KQE9 CYLC2-201ENST00000374798 2171 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
U3KQE9 RTN4-208ENST00000404909 4102 ntTSL 1 (best) BASIC2.82□□□□□ -1.96
U3KQE9 TRIQK-214ENST00000521988 3672 ntAPPRIS P1 TSL 1 (best) BASIC2.82□□□□□ -1.96
U3KQE9 RNU6-283P-201ENST00000364788 107 ntBASIC2.82□□□□□ -1.96
U3KQE9 RNU6-49P-201ENST00000384256 107 ntBASIC2.82□□□□□ -1.96
U3KQE9 SNORA51.10-201ENST00000384418 136 ntBASIC2.82□□□□□ -1.96
U3KQE9 MIR30B-201ENST00000384850 88 ntBASIC2.82□□□□□ -1.96
U3KQE9 TRAJ16-201ENST00000390521 60 ntAPPRIS P1 BASIC2.82□□□□□ -1.96
U3KQE9 RHOT1-204ENST00000394692 2960 ntTSL 2 BASIC2.82□□□□□ -1.96
U3KQE9 CST2P1-201ENST00000425770 87 ntBASIC2.82□□□□□ -1.96
U3KQE9 AC006989.1-201ENST00000427212 131 ntBASIC2.82□□□□□ -1.96
U3KQE9 AC087499.4-201ENST00000448505 178 ntBASIC2.82□□□□□ -1.96
U3KQE9 RNU7-80P-201ENST00000459562 61 ntBASIC2.82□□□□□ -1.96
U3KQE9 AC087499.8-201ENST00000578406 226 ntBASIC2.82□□□□□ -1.96
U3KQE9 MIR4286-201ENST00000580651 93 ntBASIC2.82□□□□□ -1.96
U3KQE9 MIR3163-201ENST00000581592 73 ntBASIC2.82□□□□□ -1.96
U3KQE9 MIR6875-201ENST00000617506 72 ntBASIC2.82□□□□□ -1.96
U3KQE9 XIST_intron.1-201ENST00000619444 68 ntBASIC2.82□□□□□ -1.96
U3KQE9 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC2.82□□□□□ -1.96
U3KQE9 RAD17-202ENST00000305138 3164 ntTSL 1 (best) BASIC2.82□□□□□ -1.96
U3KQE9 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC2.82□□□□□ -1.96
U3KQE9 THNSL1-201ENST00000376356 3691 ntAPPRIS P1 TSL 1 (best) BASIC2.82□□□□□ -1.96
U3KQE9 PSMA5-201ENST00000271308 3729 ntAPPRIS P1 TSL 1 (best) BASIC2.82□□□□□ -1.96
U3KQE9 DOCK7-201ENST00000251157 7084 ntAPPRIS ALT2 TSL 5 BASIC2.81□□□□□ -1.96
U3KQE9 NAIP-205ENST00000508426 4153 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
U3KQE9 PGGT1B-203ENST00000419445 9545 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
U3KQE9 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC2.81□□□□□ -1.96
U3KQE9 SNORA1B-201ENST00000362535 133 ntBASIC2.81□□□□□ -1.96
U3KQE9 Y_RNA.37-201ENST00000362606 108 ntBASIC2.81□□□□□ -1.96
U3KQE9 RNA5SP42-201ENST00000364278 115 ntBASIC2.81□□□□□ -1.96
U3KQE9 RNU1-133P-201ENST00000364867 167 ntBASIC2.81□□□□□ -1.96
U3KQE9 snoU2-30.1-201ENST00000365012 70 ntBASIC2.81□□□□□ -1.96
U3KQE9 RNA5SP323-201ENST00000391094 133 ntBASIC2.81□□□□□ -1.96
U3KQE9 PVALB-202ENST00000404171 422 ntTSL 2 BASIC2.81□□□□□ -1.96
U3KQE9 RN7SL385P-201ENST00000468873 276 ntBASIC2.81□□□□□ -1.96
U3KQE9 RNU6-904P-201ENST00000516206 101 ntBASIC2.81□□□□□ -1.96
U3KQE9 RNU6-579P-201ENST00000516879 102 ntBASIC2.81□□□□□ -1.96
U3KQE9 MIR5047-201ENST00000579212 100 ntBASIC2.81□□□□□ -1.96
U3KQE9 AL442128.1-201ENST00000615151 90 ntBASIC2.81□□□□□ -1.96
U3KQE9 AP000553.6-201ENST00000641242 118 ntBASIC2.81□□□□□ -1.96
U3KQE9 SULT1B1-201ENST00000310613 7115 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
U3KQE9 SLCO1B3-201ENST00000261196 2840 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
U3KQE9 SLC16A10-201ENST00000368850 10051 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
U3KQE9 LRFN5-204ENST00000554171 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC2.81□□□□□ -1.96
U3KQE9 HELZ-201ENST00000358691 13810 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
U3KQE9 AC091152.2-201ENST00000591628 2569 ntBASIC2.8□□□□□ -1.96
U3KQE9 MIR302B-201ENST00000362188 73 ntBASIC2.8□□□□□ -1.96
U3KQE9 Y_RNA.93-201ENST00000363066 109 ntBASIC2.8□□□□□ -1.96
U3KQE9 RNA5SP479-201ENST00000364858 117 ntBASIC2.8□□□□□ -1.96
U3KQE9 MIR548D2-201ENST00000384955 97 ntBASIC2.8□□□□□ -1.96
U3KQE9 RNA5SP467-201ENST00000391274 118 ntBASIC2.8□□□□□ -1.96
U3KQE9 SNORA26.7-201ENST00000391288 122 ntBASIC2.8□□□□□ -1.96
U3KQE9 U8.17-201ENST00000391292 132 ntBASIC2.8□□□□□ -1.96
U3KQE9 MIR1912-201ENST00000410389 80 ntBASIC2.8□□□□□ -1.96
U3KQE9 AC004975.1-201ENST00000428733 208 ntBASIC2.8□□□□□ -1.96
U3KQE9 ATP5J2P3-201ENST00000451550 258 ntBASIC2.8□□□□□ -1.96
U3KQE9 AC023141.11-201ENST00000508864 202 ntBASIC2.8□□□□□ -1.96
U3KQE9 RNU7-28P-201ENST00000516759 62 ntBASIC2.8□□□□□ -1.96
U3KQE9 AP003327.1-201ENST00000529684 127 ntBASIC2.8□□□□□ -1.96
U3KQE9 AC007536.1-201ENST00000533382 349 ntBASIC2.8□□□□□ -1.96
U3KQE9 AC008011.1-201ENST00000545989 227 ntBASIC2.8□□□□□ -1.96
U3KQE9 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC2.8□□□□□ -1.96
U3KQE9 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC2.8□□□□□ -1.96
U3KQE9 USP9Y-201ENST00000338981 10036 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
U3KQE9 MBNL1-223ENST00000498502 5258 ntTSL 5 BASIC2.8□□□□□ -1.96
U3KQE9 TET2-204ENST00000413648 4973 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
U3KQE9 FIGNL1-201ENST00000356889 3471 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
U3KQE9 C2orf78-201ENST00000409561 3045 ntAPPRIS P1 TSL 2 BASIC2.79□□□□□ -1.96
U3KQE9 TNPO1P3-201ENST00000436471 2662 ntBASIC2.79□□□□□ -1.96
U3KQE9 BCLAF3-202ENST00000379682 3217 ntAPPRIS ALT2 TSL 5 BASIC2.79□□□□□ -1.96
U3KQE9 Y_RNA.440-201ENST00000384120 114 ntBASIC2.79□□□□□ -1.96
U3KQE9 MIR590-201ENST00000385008 97 ntBASIC2.79□□□□□ -1.96
U3KQE9 RNA5SP482-201ENST00000391269 118 ntBASIC2.79□□□□□ -1.96
U3KQE9 AL627390.1-201ENST00000396055 340 ntBASIC2.79□□□□□ -1.96
U3KQE9 RNU6-628P-201ENST00000410675 107 ntBASIC2.79□□□□□ -1.96
U3KQE9 Y_RNA.625-201ENST00000411256 107 ntBASIC2.79□□□□□ -1.96
U3KQE9 ATP6V0E1P1-201ENST00000412537 226 ntBASIC2.79□□□□□ -1.96
U3KQE9 AL138962.1-201ENST00000417987 411 ntTSL 5 BASIC2.79□□□□□ -1.96
U3KQE9 AL445646.1-201ENST00000431784 216 ntBASIC2.79□□□□□ -1.96
U3KQE9 MTATP8P2-201ENST00000435212 202 ntBASIC2.79□□□□□ -1.96
U3KQE9 SNRPGP14-201ENST00000435400 219 ntBASIC2.79□□□□□ -1.96
U3KQE9 AC107083.1-201ENST00000439643 279 ntBASIC2.79□□□□□ -1.96
U3KQE9 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC2.79□□□□□ -1.96
U3KQE9 RNU7-164P-201ENST00000459221 62 ntBASIC2.79□□□□□ -1.96
U3KQE9 RNU6-1041P-201ENST00000516254 102 ntBASIC2.79□□□□□ -1.96
U3KQE9 RNU6-830P-201ENST00000516353 107 ntBASIC2.79□□□□□ -1.96
U3KQE9 AC104393.1-201ENST00000517495 255 ntTSL 3 BASIC2.79□□□□□ -1.96
U3KQE9 AC016597.1-201ENST00000564893 528 ntTSL 4 BASIC2.79□□□□□ -1.96
U3KQE9 MIR4738-201ENST00000579134 87 ntBASIC2.79□□□□□ -1.96
U3KQE9 MIR3616-201ENST00000584070 92 ntBASIC2.79□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 103.8 ms