Protein–RNA interactions for Protein: Q9Y2H6

FNDC3A, Fibronectin type-III domain-containing protein 3A, humanhuman

Known RBP Predictions only

Length 1,198 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC3AQ9Y2H6 CCDC178-205ENST00000406524 3039 ntAPPRIS ALT2 TSL 5 BASIC3.38□□□□□ -1.87
FNDC3AQ9Y2H6 ADGRV1-201ENST00000405460 19557 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
FNDC3AQ9Y2H6 THOC2-201ENST00000245838 5609 ntAPPRIS P1 TSL 5 BASIC3.37□□□□□ -1.87
FNDC3AQ9Y2H6 RNU6-309P-201ENST00000364573 106 ntBASIC3.37□□□□□ -1.87
FNDC3AQ9Y2H6 Y_RNA.280-201ENST00000364765 112 ntBASIC3.37□□□□□ -1.87
FNDC3AQ9Y2H6 Y_RNA.500-201ENST00000384466 111 ntBASIC3.37□□□□□ -1.87
FNDC3AQ9Y2H6 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC3.37□□□□□ -1.87
FNDC3AQ9Y2H6 RN7SKP111-201ENST00000410349 271 ntBASIC3.37□□□□□ -1.87
FNDC3AQ9Y2H6 AC006028.1-201ENST00000438379 402 ntBASIC3.37□□□□□ -1.87
FNDC3AQ9Y2H6 RPL39P40-201ENST00000445481 146 ntBASIC3.37□□□□□ -1.87
FNDC3AQ9Y2H6 UBE2DNL-203ENST00000474922 222 ntBASIC3.37□□□□□ -1.87
FNDC3AQ9Y2H6 SNORA48.11-201ENST00000517015 89 ntBASIC3.37□□□□□ -1.87
FNDC3AQ9Y2H6 MIR4513-201ENST00000581077 86 ntBASIC3.37□□□□□ -1.87
FNDC3AQ9Y2H6 IGKV1OR2-6-201ENST00000603485 277 ntBASIC3.37□□□□□ -1.87
FNDC3AQ9Y2H6 AL162274.2-201ENST00000614406 332 ntBASIC3.37□□□□□ -1.87
FNDC3AQ9Y2H6 DNAH12-208ENST00000495027 12146 ntAPPRIS P1 TSL 5 BASIC3.37□□□□□ -1.87
FNDC3AQ9Y2H6 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC3.37□□□□□ -1.87
FNDC3AQ9Y2H6 RNF6-201ENST00000346166 3282 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
FNDC3AQ9Y2H6 FAM214A-204ENST00000546305 3697 ntTSL 2 BASIC3.37□□□□□ -1.87
FNDC3AQ9Y2H6 NOX4-202ENST00000343727 3347 ntTSL 2 BASIC3.36□□□□□ -1.87
FNDC3AQ9Y2H6 THEMIS-201ENST00000368248 3866 ntAPPRIS P3 TSL 1 (best) BASIC3.36□□□□□ -1.87
FNDC3AQ9Y2H6 AC091152.2-201ENST00000591628 2569 ntBASIC3.36□□□□□ -1.87
FNDC3AQ9Y2H6 Z83843.1-201ENST00000604070 3685 ntBASIC3.36□□□□□ -1.87
FNDC3AQ9Y2H6 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC3.36□□□□□ -1.87
FNDC3AQ9Y2H6 MIR30E-201ENST00000362104 92 ntBASIC3.36□□□□□ -1.87
FNDC3AQ9Y2H6 SNORD21-201ENST00000383953 95 ntBASIC3.36□□□□□ -1.87
FNDC3AQ9Y2H6 C6orf10-204ENST00000447241 2148 ntAPPRIS P3 TSL 5 BASIC3.36□□□□□ -1.87
FNDC3AQ9Y2H6 AC011406.1-201ENST00000512440 370 ntBASIC3.36□□□□□ -1.87
FNDC3AQ9Y2H6 SNORA18.4-201ENST00000516440 124 ntBASIC3.36□□□□□ -1.87
FNDC3AQ9Y2H6 RNU6-1291P-201ENST00000516591 104 ntBASIC3.36□□□□□ -1.87
FNDC3AQ9Y2H6 AC015911.6-201ENST00000588445 457 ntTSL 3 BASIC3.36□□□□□ -1.87
FNDC3AQ9Y2H6 AL356280.1-201ENST00000603614 379 ntBASIC3.36□□□□□ -1.87
FNDC3AQ9Y2H6 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC3.36□□□□□ -1.87
FNDC3AQ9Y2H6 AC006386.2-201ENST00000624491 75 ntBASIC3.36□□□□□ -1.87
FNDC3AQ9Y2H6 AC012005.1-201ENST00000624575 75 ntBASIC3.36□□□□□ -1.87
FNDC3AQ9Y2H6 AL136360.1-201ENST00000503377 1900 ntBASIC3.36□□□□□ -1.87
FNDC3AQ9Y2H6 ROS1-202ENST00000368508 7435 ntAPPRIS P2 TSL 1 (best) BASIC3.36□□□□□ -1.87
FNDC3AQ9Y2H6 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC3.36□□□□□ -1.87
FNDC3AQ9Y2H6 ELF1-201ENST00000239882 3566 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
FNDC3AQ9Y2H6 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC3.35□□□□□ -1.87
FNDC3AQ9Y2H6 ADGRG4-203ENST00000394143 9931 ntAPPRIS P2 TSL 1 (best) BASIC3.35□□□□□ -1.87
FNDC3AQ9Y2H6 RNU1-96P-201ENST00000364163 162 ntBASIC3.35□□□□□ -1.87
FNDC3AQ9Y2H6 RNU6-1138P-201ENST00000365359 106 ntBASIC3.35□□□□□ -1.87
FNDC3AQ9Y2H6 Y_RNA.510-201ENST00000384511 114 ntBASIC3.35□□□□□ -1.87
FNDC3AQ9Y2H6 MIR184-201ENST00000384962 84 ntBASIC3.35□□□□□ -1.87
FNDC3AQ9Y2H6 RNA5SP467-201ENST00000391274 118 ntBASIC3.35□□□□□ -1.87
FNDC3AQ9Y2H6 SNORA26-201ENST00000391286 122 ntBASIC3.35□□□□□ -1.87
FNDC3AQ9Y2H6 RNU2-63P-201ENST00000410792 194 ntBASIC3.35□□□□□ -1.87
FNDC3AQ9Y2H6 AL020994.3-201ENST00000449126 274 ntTSL 3 BASIC3.35□□□□□ -1.87
FNDC3AQ9Y2H6 S100A11P2-201ENST00000467589 312 ntBASIC3.35□□□□□ -1.87
FNDC3AQ9Y2H6 NDUFA4P2-201ENST00000489989 244 ntBASIC3.35□□□□□ -1.87
FNDC3AQ9Y2H6 RNU6-1041P-201ENST00000516254 102 ntBASIC3.35□□□□□ -1.87
FNDC3AQ9Y2H6 RNA5SP341-201ENST00000516261 117 ntBASIC3.35□□□□□ -1.87
FNDC3AQ9Y2H6 Y_RNA.709-201ENST00000516952 92 ntBASIC3.35□□□□□ -1.87
FNDC3AQ9Y2H6 MIR4425-201ENST00000580572 84 ntBASIC3.35□□□□□ -1.87
FNDC3AQ9Y2H6 LRFN5-204ENST00000554171 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC3.35□□□□□ -1.87
FNDC3AQ9Y2H6 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.35□□□□□ -1.87
FNDC3AQ9Y2H6 ATP2C1-202ENST00000359644 3401 ntAPPRIS P3 TSL 1 (best) BASIC3.34□□□□□ -1.87
FNDC3AQ9Y2H6 SLC30A6-202ENST00000357055 4758 ntTSL 2 BASIC3.34□□□□□ -1.87
FNDC3AQ9Y2H6 MIR520G-201ENST00000385064 90 ntBASIC3.34□□□□□ -1.87
FNDC3AQ9Y2H6 SNORA12.1-201ENST00000390873 148 ntBASIC3.34□□□□□ -1.87
FNDC3AQ9Y2H6 AL603914.1-201ENST00000401964 204 ntBASIC3.34□□□□□ -1.87
FNDC3AQ9Y2H6 SNORD33.1-201ENST00000516213 88 ntBASIC3.34□□□□□ -1.87
FNDC3AQ9Y2H6 MIR2276-201ENST00000516886 89 ntBASIC3.34□□□□□ -1.87
FNDC3AQ9Y2H6 RNU6-365P-201ENST00000517113 106 ntBASIC3.34□□□□□ -1.87
FNDC3AQ9Y2H6 RNU6-667P-201ENST00000517186 102 ntBASIC3.34□□□□□ -1.87
FNDC3AQ9Y2H6 RNU1-104P-201ENST00000517280 175 ntBASIC3.34□□□□□ -1.87
FNDC3AQ9Y2H6 AC007751.1-201ENST00000529260 376 ntBASIC3.34□□□□□ -1.87
FNDC3AQ9Y2H6 AC025271.3-201ENST00000563031 255 ntTSL 5 BASIC3.34□□□□□ -1.87
FNDC3AQ9Y2H6 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC3.34□□□□□ -1.88
FNDC3AQ9Y2H6 TBC1D31-214ENST00000522420 3167 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
FNDC3AQ9Y2H6 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC3.33□□□□□ -1.88
FNDC3AQ9Y2H6 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
FNDC3AQ9Y2H6 DPP10-205ENST00000410059 6278 ntAPPRIS ALT2 TSL 1 (best) BASIC3.33□□□□□ -1.88
FNDC3AQ9Y2H6 Y_RNA.52-201ENST00000362760 96 ntBASIC3.33□□□□□ -1.88
FNDC3AQ9Y2H6 snoU2-30.2-201ENST00000362805 70 ntBASIC3.33□□□□□ -1.88
FNDC3AQ9Y2H6 Y_RNA.66-201ENST00000362862 102 ntBASIC3.33□□□□□ -1.88
FNDC3AQ9Y2H6 SNORA22-201ENST00000383907 134 ntBASIC3.33□□□□□ -1.88
FNDC3AQ9Y2H6 MIR592-201ENST00000384959 97 ntBASIC3.33□□□□□ -1.88
FNDC3AQ9Y2H6 RNU6-220P-201ENST00000390919 107 ntBASIC3.33□□□□□ -1.88
FNDC3AQ9Y2H6 MIR1289-1-201ENST00000408836 144 ntBASIC3.33□□□□□ -1.88
FNDC3AQ9Y2H6 YWHAEP4-201ENST00000505390 198 ntBASIC3.33□□□□□ -1.88
FNDC3AQ9Y2H6 AC096725.1-201ENST00000514266 313 ntBASIC3.33□□□□□ -1.88
FNDC3AQ9Y2H6 RNU7-99P-201ENST00000516271 62 ntBASIC3.33□□□□□ -1.88
FNDC3AQ9Y2H6 RNU6-1146P-201ENST00000516282 102 ntBASIC3.33□□□□□ -1.88
FNDC3AQ9Y2H6 RNU7-128P-201ENST00000517247 62 ntBASIC3.33□□□□□ -1.88
FNDC3AQ9Y2H6 MIR4662B-201ENST00000579498 81 ntBASIC3.33□□□□□ -1.88
FNDC3AQ9Y2H6 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC3.33□□□□□ -1.88
FNDC3AQ9Y2H6 UBE2W-203ENST00000517608 8426 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
FNDC3AQ9Y2H6 PTPN22-207ENST00000528414 3424 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
FNDC3AQ9Y2H6 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC3.33□□□□□ -1.88
FNDC3AQ9Y2H6 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
FNDC3AQ9Y2H6 SKIL-203ENST00000426052 2757 ntTSL 2 BASIC3.32□□□□□ -1.88
FNDC3AQ9Y2H6 OSTN-202ENST00000445281 3134 ntTSL 5 BASIC3.32□□□□□ -1.88
FNDC3AQ9Y2H6 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC3.32□□□□□ -1.88
FNDC3AQ9Y2H6 Y_RNA.267-201ENST00000364679 109 ntBASIC3.32□□□□□ -1.88
FNDC3AQ9Y2H6 SNORA1-201ENST00000384107 130 ntBASIC3.32□□□□□ -1.88
FNDC3AQ9Y2H6 MIR561-201ENST00000385216 97 ntBASIC3.32□□□□□ -1.88
FNDC3AQ9Y2H6 COTL1P1-201ENST00000422309 375 ntBASIC3.32□□□□□ -1.88
FNDC3AQ9Y2H6 RPS15AP28-201ENST00000435088 386 ntBASIC3.32□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 105.4 ms