Protein–RNA interactions for Protein: Q9UNE2

RPH3AL, Rab effector Noc2, humanhuman

Predictions only

Length 315 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPH3ALQ9UNE2 AP002001.1-203ENST00000534002 267 ntBASIC0.89□□□□□ -2.27
RPH3ALQ9UNE2 AC136932.1-201ENST00000574771 208 ntBASIC0.89□□□□□ -2.27
RPH3ALQ9UNE2 MIR3684-201ENST00000579779 74 ntBASIC0.89□□□□□ -2.27
RPH3ALQ9UNE2 MIR4295-201ENST00000585286 85 ntBASIC0.89□□□□□ -2.27
RPH3ALQ9UNE2 AC242852.1-201ENST00000612151 96 ntBASIC0.89□□□□□ -2.27
RPH3ALQ9UNE2 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC0.89□□□□□ -2.27
RPH3ALQ9UNE2 U4.5-201ENST00000617137 123 ntBASIC0.89□□□□□ -2.27
RPH3ALQ9UNE2 AC244015.1-201ENST00000622301 99 ntBASIC0.89□□□□□ -2.27
RPH3ALQ9UNE2 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC0.88□□□□□ -2.27
RPH3ALQ9UNE2 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC0.88□□□□□ -2.27
RPH3ALQ9UNE2 MIRLET7C-201ENST00000362160 84 ntBASIC0.88□□□□□ -2.27
RPH3ALQ9UNE2 RNY1P16-201ENST00000363063 111 ntBASIC0.88□□□□□ -2.27
RPH3ALQ9UNE2 Y_RNA.124-201ENST00000363339 93 ntBASIC0.88□□□□□ -2.27
RPH3ALQ9UNE2 Y_RNA.318-201ENST00000365131 97 ntBASIC0.88□□□□□ -2.27
RPH3ALQ9UNE2 RNA5SP482-201ENST00000391269 118 ntBASIC0.88□□□□□ -2.27
RPH3ALQ9UNE2 RNU6-1050P-201ENST00000410388 107 ntBASIC0.88□□□□□ -2.27
RPH3ALQ9UNE2 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC0.88□□□□□ -2.27
RPH3ALQ9UNE2 POLR2J4-204ENST00000418424 324 ntBASIC0.88□□□□□ -2.27
RPH3ALQ9UNE2 AL591704.2-201ENST00000421658 181 ntBASIC0.88□□□□□ -2.27
RPH3ALQ9UNE2 PSPC1-AS2-201ENST00000423023 376 ntTSL 3 BASIC0.88□□□□□ -2.27
RPH3ALQ9UNE2 MTCYBP10-201ENST00000424905 650 ntBASIC0.88□□□□□ -2.27
RPH3ALQ9UNE2 RPL39P39-201ENST00000455840 151 ntBASIC0.88□□□□□ -2.27
RPH3ALQ9UNE2 RPS29P29-201ENST00000456396 171 ntBASIC0.88□□□□□ -2.27
RPH3ALQ9UNE2 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC0.88□□□□□ -2.27
RPH3ALQ9UNE2 SEMA6A-AS1-204ENST00000510682 521 ntTSL 5 BASIC0.88□□□□□ -2.27
RPH3ALQ9UNE2 AC074133.1-201ENST00000515696 183 ntBASIC0.88□□□□□ -2.27
RPH3ALQ9UNE2 RNU6-1016P-201ENST00000516689 94 ntBASIC0.88□□□□□ -2.27
RPH3ALQ9UNE2 RNU6-1116P-201ENST00000517269 99 ntBASIC0.88□□□□□ -2.27
RPH3ALQ9UNE2 AL357312.1-201ENST00000603879 298 ntBASIC0.88□□□□□ -2.27
RPH3ALQ9UNE2 AL359821.1-201ENST00000605519 182 ntBASIC0.88□□□□□ -2.27
RPH3ALQ9UNE2 AL020996.3-201ENST00000606617 222 ntBASIC0.88□□□□□ -2.27
RPH3ALQ9UNE2 AL353770.2-201ENST00000620024 78 ntBASIC0.88□□□□□ -2.27
RPH3ALQ9UNE2 AC127459.3-201ENST00000624328 466 ntBASIC0.88□□□□□ -2.27
RPH3ALQ9UNE2 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC0.87□□□□□ -2.27
RPH3ALQ9UNE2 RNU6-454P-201ENST00000364292 107 ntBASIC0.87□□□□□ -2.27
RPH3ALQ9UNE2 Y_RNA.358-201ENST00000365491 99 ntBASIC0.87□□□□□ -2.27
RPH3ALQ9UNE2 MIR548F5-201ENST00000408421 86 ntBASIC0.87□□□□□ -2.27
RPH3ALQ9UNE2 MIR548F1-201ENST00000408667 84 ntBASIC0.87□□□□□ -2.27
RPH3ALQ9UNE2 RPS3AP52-201ENST00000435639 297 ntBASIC0.87□□□□□ -2.27
RPH3ALQ9UNE2 RPS29P28-201ENST00000446439 141 ntBASIC0.87□□□□□ -2.27
RPH3ALQ9UNE2 RNU6-625P-201ENST00000459412 107 ntBASIC0.87□□□□□ -2.27
RPH3ALQ9UNE2 AL049830.1-201ENST00000468034 425 ntBASIC0.87□□□□□ -2.27
RPH3ALQ9UNE2 SCARNA16.2-201ENST00000516520 172 ntBASIC0.87□□□□□ -2.27
RPH3ALQ9UNE2 MIR4661-201ENST00000582720 75 ntBASIC0.87□□□□□ -2.27
RPH3ALQ9UNE2 AC018638.8-201ENST00000588755 281 ntBASIC0.87□□□□□ -2.27
RPH3ALQ9UNE2 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC0.86□□□□□ -2.27
RPH3ALQ9UNE2 Y_RNA.86-201ENST00000363020 111 ntBASIC0.86□□□□□ -2.27
RPH3ALQ9UNE2 RNY1P10-201ENST00000363268 113 ntBASIC0.86□□□□□ -2.27
RPH3ALQ9UNE2 RNU4-41P-201ENST00000364426 143 ntBASIC0.86□□□□□ -2.27
RPH3ALQ9UNE2 Y_RNA.327-201ENST00000365201 102 ntBASIC0.86□□□□□ -2.27
RPH3ALQ9UNE2 SNORD12-201ENST00000391002 90 ntBASIC0.86□□□□□ -2.27
RPH3ALQ9UNE2 MIR873-201ENST00000401120 77 ntBASIC0.86□□□□□ -2.27
RPH3ALQ9UNE2 RNA5SP475-201ENST00000410568 110 ntBASIC0.86□□□□□ -2.27
RPH3ALQ9UNE2 AC092423.1-201ENST00000430165 186 ntBASIC0.86□□□□□ -2.27
RPH3ALQ9UNE2 AL589935.1-209ENST00000432050 418 ntTSL 5 BASIC0.86□□□□□ -2.27
RPH3ALQ9UNE2 Z98949.2-201ENST00000440996 144 ntBASIC0.86□□□□□ -2.27
RPH3ALQ9UNE2 UBE2V1P7-201ENST00000446395 340 ntBASIC0.86□□□□□ -2.27
RPH3ALQ9UNE2 RPL7P42-201ENST00000481005 679 ntBASIC0.86□□□□□ -2.27
RPH3ALQ9UNE2 AC093852.1-201ENST00000503587 266 ntBASIC0.86□□□□□ -2.27
RPH3ALQ9UNE2 AC105313.1-201ENST00000509121 353 ntBASIC0.86□□□□□ -2.27
RPH3ALQ9UNE2 TRMT112P2-201ENST00000512910 132 ntBASIC0.86□□□□□ -2.27
RPH3ALQ9UNE2 RNU6-718P-201ENST00000516166 105 ntBASIC0.86□□□□□ -2.27
RPH3ALQ9UNE2 ACA64.5-201ENST00000516207 127 ntBASIC0.86□□□□□ -2.27
RPH3ALQ9UNE2 RNU6-63P-201ENST00000516690 95 ntBASIC0.86□□□□□ -2.27
RPH3ALQ9UNE2 AC090517.2-201ENST00000614966 680 ntBASIC0.86□□□□□ -2.27
RPH3ALQ9UNE2 MIR3674-201ENST00000636576 68 ntBASIC0.86□□□□□ -2.27
RPH3ALQ9UNE2 AC008163.1-202ENST00000636004 2889 ntBASIC0.85□□□□□ -2.27
RPH3ALQ9UNE2 RNU6-117P-201ENST00000365415 107 ntBASIC0.85□□□□□ -2.27
RPH3ALQ9UNE2 RNU6-318P-201ENST00000384283 103 ntBASIC0.85□□□□□ -2.27
RPH3ALQ9UNE2 RNU6-1215P-201ENST00000384441 102 ntBASIC0.85□□□□□ -2.27
RPH3ALQ9UNE2 SNORA80D-201ENST00000384488 135 ntBASIC0.85□□□□□ -2.27
RPH3ALQ9UNE2 MIR548K-201ENST00000408406 116 ntBASIC0.85□□□□□ -2.27
RPH3ALQ9UNE2 RNU6-321P-201ENST00000410912 106 ntBASIC0.85□□□□□ -2.27
RPH3ALQ9UNE2 RNU5A-5P-201ENST00000411054 116 ntBASIC0.85□□□□□ -2.27
RPH3ALQ9UNE2 AC114482.1-201ENST00000418010 247 ntBASIC0.85□□□□□ -2.27
RPH3ALQ9UNE2 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC0.85□□□□□ -2.27
RPH3ALQ9UNE2 RPS26P48-201ENST00000491713 339 ntBASIC0.85□□□□□ -2.27
RPH3ALQ9UNE2 SNORA40.9-201ENST00000515895 93 ntBASIC0.85□□□□□ -2.27
RPH3ALQ9UNE2 RNU6-1096P-201ENST00000517089 102 ntBASIC0.85□□□□□ -2.27
RPH3ALQ9UNE2 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC0.85□□□□□ -2.27
RPH3ALQ9UNE2 MIR3660-201ENST00000584845 100 ntBASIC0.85□□□□□ -2.27
RPH3ALQ9UNE2 FAM106DP-201ENST00000586416 501 ntBASIC0.85□□□□□ -2.27
RPH3ALQ9UNE2 AC009229.3-201ENST00000608056 282 ntBASIC0.85□□□□□ -2.27
RPH3ALQ9UNE2 5S_rRNA.13-201ENST00000622298 123 ntBASIC0.85□□□□□ -2.27
RPH3ALQ9UNE2 MIR410-201ENST00000362222 80 ntBASIC0.84□□□□□ -2.27
RPH3ALQ9UNE2 SNORD114-24-201ENST00000365029 72 ntBASIC0.84□□□□□ -2.27
RPH3ALQ9UNE2 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC0.84□□□□□ -2.27
RPH3ALQ9UNE2 RNU6-601P-201ENST00000384540 107 ntBASIC0.84□□□□□ -2.27
RPH3ALQ9UNE2 MIR526A1-201ENST00000384897 85 ntBASIC0.84□□□□□ -2.27
RPH3ALQ9UNE2 MIR520G-201ENST00000385064 90 ntBASIC0.84□□□□□ -2.27
RPH3ALQ9UNE2 RNU6-510P-201ENST00000391239 108 ntBASIC0.84□□□□□ -2.27
RPH3ALQ9UNE2 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC0.84□□□□□ -2.27
RPH3ALQ9UNE2 LINC01399-202ENST00000458450 244 ntBASIC0.84□□□□□ -2.27
RPH3ALQ9UNE2 LINC02491-201ENST00000504710 403 ntTSL 2 BASIC0.84□□□□□ -2.27
RPH3ALQ9UNE2 AC008243.1-201ENST00000504955 389 ntTSL 3 BASIC0.84□□□□□ -2.27
RPH3ALQ9UNE2 Y_RNA.676-201ENST00000516393 96 ntBASIC0.84□□□□□ -2.27
RPH3ALQ9UNE2 Y_RNA.708-201ENST00000516950 96 ntBASIC0.84□□□□□ -2.27
RPH3ALQ9UNE2 AC091895.1-201ENST00000624494 256 ntBASIC0.84□□□□□ -2.27
RPH3ALQ9UNE2 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC0.83□□□□□ -2.28
RPH3ALQ9UNE2 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC0.83□□□□□ -2.28
Retrieved 100 of 98,524 protein–RNA pairs in 110.1 ms