Protein–RNA interactions for Protein: Q9UBP4

DKK3, Dickkopf-related protein 3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DKK3Q9UBP4 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC2.5□□□□□ -2.01
DKK3Q9UBP4 RNU6-324P-201ENST00000363957 106 ntBASIC2.5□□□□□ -2.01
DKK3Q9UBP4 RNA5SP240-201ENST00000365355 128 ntBASIC2.5□□□□□ -2.01
DKK3Q9UBP4 RNU6-975P-201ENST00000384296 105 ntBASIC2.5□□□□□ -2.01
DKK3Q9UBP4 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC2.5□□□□□ -2.01
DKK3Q9UBP4 AL359511.1-201ENST00000402970 211 ntBASIC2.5□□□□□ -2.01
DKK3Q9UBP4 SNORA3.2-201ENST00000408221 125 ntBASIC2.5□□□□□ -2.01
DKK3Q9UBP4 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC2.5□□□□□ -2.01
DKK3Q9UBP4 AL591806.2-201ENST00000433122 173 ntBASIC2.5□□□□□ -2.01
DKK3Q9UBP4 AC016925.1-201ENST00000458303 298 ntBASIC2.5□□□□□ -2.01
DKK3Q9UBP4 RNU7-120P-201ENST00000459334 63 ntBASIC2.5□□□□□ -2.01
DKK3Q9UBP4 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC2.5□□□□□ -2.01
DKK3Q9UBP4 RNA5SP458-201ENST00000516188 119 ntBASIC2.5□□□□□ -2.01
DKK3Q9UBP4 SNORA48.11-201ENST00000517015 89 ntBASIC2.5□□□□□ -2.01
DKK3Q9UBP4 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC2.5□□□□□ -2.01
DKK3Q9UBP4 AC022616.8-201ENST00000533569 253 ntBASIC2.5□□□□□ -2.01
DKK3Q9UBP4 Six3os1_7.1-201ENST00000621512 201 ntBASIC2.5□□□□□ -2.01
DKK3Q9UBP4 snoU18.1-201ENST00000629629 71 ntBASIC2.5□□□□□ -2.01
DKK3Q9UBP4 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC2.5□□□□□ -2.01
DKK3Q9UBP4 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC2.5□□□□□ -2.01
DKK3Q9UBP4 AC080100.1-201ENST00000624239 5356 ntBASIC2.49□□□□□ -2.01
DKK3Q9UBP4 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC2.49□□□□□ -2.01
DKK3Q9UBP4 AC016717.2-201ENST00000609089 5141 ntBASIC2.49□□□□□ -2.01
DKK3Q9UBP4 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC2.49□□□□□ -2.01
DKK3Q9UBP4 RNU6-1272P-201ENST00000362776 107 ntBASIC2.49□□□□□ -2.01
DKK3Q9UBP4 Y_RNA.180-201ENST00000363867 113 ntBASIC2.49□□□□□ -2.01
DKK3Q9UBP4 Y_RNA.304-201ENST00000365011 112 ntBASIC2.49□□□□□ -2.01
DKK3Q9UBP4 RNU6-546P-201ENST00000383991 107 ntBASIC2.49□□□□□ -2.01
DKK3Q9UBP4 AL355497.1-201ENST00000406262 551 ntBASIC2.49□□□□□ -2.01
DKK3Q9UBP4 RNU6ATAC37P-201ENST00000408328 131 ntBASIC2.49□□□□□ -2.01
DKK3Q9UBP4 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC2.49□□□□□ -2.01
DKK3Q9UBP4 RNU7-57P-201ENST00000459540 60 ntBASIC2.49□□□□□ -2.01
DKK3Q9UBP4 RNU6-221P-201ENST00000459541 99 ntBASIC2.49□□□□□ -2.01
DKK3Q9UBP4 AC074131.1-201ENST00000514662 253 ntTSL 2 BASIC2.49□□□□□ -2.01
DKK3Q9UBP4 AC136628.3-201ENST00000521868 290 ntBASIC2.49□□□□□ -2.01
DKK3Q9UBP4 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC2.49□□□□□ -2.01
DKK3Q9UBP4 AP005660.1-201ENST00000522972 293 ntBASIC2.49□□□□□ -2.01
DKK3Q9UBP4 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC2.49□□□□□ -2.01
DKK3Q9UBP4 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC2.49□□□□□ -2.01
DKK3Q9UBP4 snoZ196.1-201ENST00000625269 89 ntBASIC2.49□□□□□ -2.01
DKK3Q9UBP4 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC2.49□□□□□ -2.01
DKK3Q9UBP4 AL159152.1-201ENST00000635019 2587 ntBASIC2.49□□□□□ -2.01
DKK3Q9UBP4 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC2.48□□□□□ -2.01
DKK3Q9UBP4 RNA5SP125-201ENST00000364843 120 ntBASIC2.48□□□□□ -2.01
DKK3Q9UBP4 RNU2-32P-201ENST00000411193 191 ntBASIC2.48□□□□□ -2.01
DKK3Q9UBP4 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC2.48□□□□□ -2.01
DKK3Q9UBP4 RNU6-948P-201ENST00000516374 107 ntBASIC2.48□□□□□ -2.01
DKK3Q9UBP4 MIR1248-201ENST00000629190 106 ntBASIC2.48□□□□□ -2.01
DKK3Q9UBP4 DNAH14-210ENST00000439375 13548 ntAPPRIS P1 TSL 5 BASIC2.47□□□□□ -2.01
DKK3Q9UBP4 Y_RNA.368-201ENST00000365547 113 ntBASIC2.47□□□□□ -2.01
DKK3Q9UBP4 RNU6-1062P-201ENST00000383908 107 ntBASIC2.47□□□□□ -2.01
DKK3Q9UBP4 RNU6-211P-201ENST00000384047 107 ntBASIC2.47□□□□□ -2.01
DKK3Q9UBP4 RNU6-886P-201ENST00000384319 105 ntBASIC2.47□□□□□ -2.01
DKK3Q9UBP4 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC2.47□□□□□ -2.01
DKK3Q9UBP4 RNA5SP425-201ENST00000410336 112 ntBASIC2.47□□□□□ -2.01
DKK3Q9UBP4 HMGN2P18-201ENST00000450680 270 ntBASIC2.47□□□□□ -2.01
DKK3Q9UBP4 Y_RNA.637-201ENST00000459424 114 ntBASIC2.47□□□□□ -2.01
DKK3Q9UBP4 SNORA70.12-201ENST00000516084 153 ntBASIC2.47□□□□□ -2.01
DKK3Q9UBP4 RNU2-34P-201ENST00000516534 121 ntBASIC2.47□□□□□ -2.01
DKK3Q9UBP4 RNU7-193P-201ENST00000516723 65 ntBASIC2.47□□□□□ -2.01
DKK3Q9UBP4 AP002392.1-201ENST00000537692 208 ntBASIC2.47□□□□□ -2.01
DKK3Q9UBP4 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC2.47□□□□□ -2.01
DKK3Q9UBP4 MIR5692C2-201ENST00000577959 77 ntBASIC2.47□□□□□ -2.01
DKK3Q9UBP4 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC2.47□□□□□ -2.01
DKK3Q9UBP4 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC2.47□□□□□ -2.01
DKK3Q9UBP4 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC2.47□□□□□ -2.01
DKK3Q9UBP4 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC2.46□□□□□ -2.02
DKK3Q9UBP4 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC2.46□□□□□ -2.02
DKK3Q9UBP4 Y_RNA.270-201ENST00000364693 104 ntBASIC2.46□□□□□ -2.02
DKK3Q9UBP4 RNU1-91P-201ENST00000364746 163 ntBASIC2.46□□□□□ -2.02
DKK3Q9UBP4 Y_RNA.435-201ENST00000384095 112 ntBASIC2.46□□□□□ -2.02
DKK3Q9UBP4 AL357139.1-201ENST00000407792 426 ntBASIC2.46□□□□□ -2.02
DKK3Q9UBP4 RNU6ATAC19P-201ENST00000408096 110 ntBASIC2.46□□□□□ -2.02
DKK3Q9UBP4 RNU2-63P-201ENST00000410792 194 ntBASIC2.46□□□□□ -2.02
DKK3Q9UBP4 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC2.46□□□□□ -2.02
DKK3Q9UBP4 AC024405.2-202ENST00000532731 184 ntBASIC2.46□□□□□ -2.02
DKK3Q9UBP4 AC007598.1-202ENST00000561528 435 ntTSL 3 BASIC2.46□□□□□ -2.02
DKK3Q9UBP4 AC072026.1-201ENST00000605023 201 ntBASIC2.46□□□□□ -2.02
DKK3Q9UBP4 AL008718.3-201ENST00000610217 321 ntBASIC2.46□□□□□ -2.02
DKK3Q9UBP4 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC2.46□□□□□ -2.02
DKK3Q9UBP4 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC2.46□□□□□ -2.02
DKK3Q9UBP4 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC2.45□□□□□ -2.02
DKK3Q9UBP4 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC2.45□□□□□ -2.02
DKK3Q9UBP4 RNU6-1020P-201ENST00000363684 107 ntBASIC2.45□□□□□ -2.02
DKK3Q9UBP4 RNU6-801P-201ENST00000364087 105 ntBASIC2.45□□□□□ -2.02
DKK3Q9UBP4 Y_RNA.262-201ENST00000364641 102 ntBASIC2.45□□□□□ -2.02
DKK3Q9UBP4 Y_RNA.456-201ENST00000384232 111 ntBASIC2.45□□□□□ -2.02
DKK3Q9UBP4 RNU6-1235P-201ENST00000384559 107 ntBASIC2.45□□□□□ -2.02
DKK3Q9UBP4 MIR561-201ENST00000385216 97 ntBASIC2.45□□□□□ -2.02
DKK3Q9UBP4 SNORA40.19-201ENST00000390846 128 ntBASIC2.45□□□□□ -2.02
DKK3Q9UBP4 AL603908.1-201ENST00000406098 201 ntBASIC2.45□□□□□ -2.02
DKK3Q9UBP4 RNU2-48P-201ENST00000410694 191 ntBASIC2.45□□□□□ -2.02
DKK3Q9UBP4 RNA5SP270-201ENST00000411361 118 ntBASIC2.45□□□□□ -2.02
DKK3Q9UBP4 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC2.45□□□□□ -2.02
DKK3Q9UBP4 RPS12P2-201ENST00000439728 269 ntBASIC2.45□□□□□ -2.02
DKK3Q9UBP4 RNU6-498P-201ENST00000459468 107 ntBASIC2.45□□□□□ -2.02
DKK3Q9UBP4 RPS27P21-201ENST00000486977 252 ntBASIC2.45□□□□□ -2.02
DKK3Q9UBP4 AC079804.2-201ENST00000490376 200 ntBASIC2.45□□□□□ -2.02
DKK3Q9UBP4 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC2.45□□□□□ -2.02
DKK3Q9UBP4 CKS1BP2-201ENST00000497342 240 ntBASIC2.45□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 179.6 ms