Protein–RNA interactions for Protein: Q9NSD5

SLC6A13, Sodium- and chloride-dependent GABA transporter 2, humanhuman

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A13Q9NSD5 AL078595.1-201ENST00000404458 226 ntBASIC1.84□□□□□ -2.11
SLC6A13Q9NSD5 SUMO2P12-201ENST00000405924 140 ntBASIC1.84□□□□□ -2.11
SLC6A13Q9NSD5 RNU2-20P-201ENST00000410425 191 ntBASIC1.84□□□□□ -2.11
SLC6A13Q9NSD5 RNU6-1199P-201ENST00000411249 104 ntBASIC1.84□□□□□ -2.11
SLC6A13Q9NSD5 EBAG9P1-201ENST00000418955 543 ntBASIC1.84□□□□□ -2.11
SLC6A13Q9NSD5 AC010154.1-201ENST00000425857 269 ntBASIC1.84□□□□□ -2.11
SLC6A13Q9NSD5 RPS26P55-201ENST00000471178 356 ntBASIC1.84□□□□□ -2.11
SLC6A13Q9NSD5 AL163195.1-201ENST00000496941 348 ntBASIC1.84□□□□□ -2.11
SLC6A13Q9NSD5 SNORA70.12-201ENST00000516084 153 ntBASIC1.84□□□□□ -2.11
SLC6A13Q9NSD5 AC113195.1-201ENST00000579952 141 ntBASIC1.84□□□□□ -2.11
SLC6A13Q9NSD5 MIR4524B-201ENST00000581569 115 ntBASIC1.84□□□□□ -2.11
SLC6A13Q9NSD5 uc_338.20-201ENST00000621563 178 ntBASIC1.84□□□□□ -2.11
SLC6A13Q9NSD5 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC1.84□□□□□ -2.12
SLC6A13Q9NSD5 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC1.83□□□□□ -2.12
SLC6A13Q9NSD5 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC1.83□□□□□ -2.12
SLC6A13Q9NSD5 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC1.83□□□□□ -2.12
SLC6A13Q9NSD5 Y_RNA.124-201ENST00000363339 93 ntBASIC1.83□□□□□ -2.12
SLC6A13Q9NSD5 SNORA63-201ENST00000363450 132 ntBASIC1.83□□□□□ -2.12
SLC6A13Q9NSD5 Y_RNA.326-201ENST00000365176 113 ntBASIC1.83□□□□□ -2.12
SLC6A13Q9NSD5 Y_RNA.422-201ENST00000384054 114 ntBASIC1.83□□□□□ -2.12
SLC6A13Q9NSD5 RNU6-937P-201ENST00000384325 106 ntBASIC1.83□□□□□ -2.12
SLC6A13Q9NSD5 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC1.83□□□□□ -2.12
SLC6A13Q9NSD5 RNU2-7P-201ENST00000410794 178 ntBASIC1.83□□□□□ -2.12
SLC6A13Q9NSD5 RNA5SP489-201ENST00000410986 109 ntBASIC1.83□□□□□ -2.12
SLC6A13Q9NSD5 RPL23AP36-201ENST00000413895 458 ntBASIC1.83□□□□□ -2.12
SLC6A13Q9NSD5 AL445646.1-201ENST00000431784 216 ntBASIC1.83□□□□□ -2.12
SLC6A13Q9NSD5 CPHL1P-203ENST00000471823 523 ntTSL 5 BASIC1.83□□□□□ -2.12
SLC6A13Q9NSD5 RNU6-397P-201ENST00000516226 104 ntBASIC1.83□□□□□ -2.12
SLC6A13Q9NSD5 RNU6-966P-201ENST00000516479 104 ntBASIC1.83□□□□□ -2.12
SLC6A13Q9NSD5 RNA5SP364-201ENST00000516938 78 ntBASIC1.83□□□□□ -2.12
SLC6A13Q9NSD5 RNA5SP437-201ENST00000517249 129 ntBASIC1.83□□□□□ -2.12
SLC6A13Q9NSD5 AL355297.3-201ENST00000604082 446 ntBASIC1.83□□□□□ -2.12
SLC6A13Q9NSD5 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC1.83□□□□□ -2.12
SLC6A13Q9NSD5 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC1.83□□□□□ -2.12
SLC6A13Q9NSD5 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC1.83□□□□□ -2.12
SLC6A13Q9NSD5 Y_RNA.183-201ENST00000363882 113 ntBASIC1.82□□□□□ -2.12
SLC6A13Q9NSD5 Y_RNA.331-201ENST00000365267 102 ntBASIC1.82□□□□□ -2.12
SLC6A13Q9NSD5 RNU11-5P-201ENST00000391216 129 ntBASIC1.82□□□□□ -2.12
SLC6A13Q9NSD5 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC1.82□□□□□ -2.12
SLC6A13Q9NSD5 AC073910.1-201ENST00000445047 438 ntBASIC1.82□□□□□ -2.12
SLC6A13Q9NSD5 LINC01594-201ENST00000445083 611 ntTSL 5 BASIC1.82□□□□□ -2.12
SLC6A13Q9NSD5 RPL23AP63-201ENST00000498752 471 ntBASIC1.82□□□□□ -2.12
SLC6A13Q9NSD5 RNU6-764P-201ENST00000516396 105 ntBASIC1.82□□□□□ -2.12
SLC6A13Q9NSD5 RNA5SP481-201ENST00000516814 122 ntBASIC1.82□□□□□ -2.12
SLC6A13Q9NSD5 RNU7-110P-201ENST00000516891 62 ntBASIC1.82□□□□□ -2.12
SLC6A13Q9NSD5 RNU6-1137P-201ENST00000517073 99 ntBASIC1.82□□□□□ -2.12
SLC6A13Q9NSD5 RNU7-172P-201ENST00000517125 64 ntBASIC1.82□□□□□ -2.12
SLC6A13Q9NSD5 AC011373.1-201ENST00000607270 237 ntBASIC1.82□□□□□ -2.12
SLC6A13Q9NSD5 DLX6-AS1_2.1-201ENST00000613701 207 ntBASIC1.82□□□□□ -2.12
SLC6A13Q9NSD5 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC1.82□□□□□ -2.12
SLC6A13Q9NSD5 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC1.81□□□□□ -2.12
SLC6A13Q9NSD5 RNU6-324P-201ENST00000363957 106 ntBASIC1.81□□□□□ -2.12
SLC6A13Q9NSD5 Y_RNA.276-201ENST00000364732 109 ntBASIC1.81□□□□□ -2.12
SLC6A13Q9NSD5 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC1.81□□□□□ -2.12
SLC6A13Q9NSD5 MIR1289-2-201ENST00000408360 111 ntBASIC1.81□□□□□ -2.12
SLC6A13Q9NSD5 RNU6-985P-201ENST00000410182 104 ntBASIC1.81□□□□□ -2.12
SLC6A13Q9NSD5 RPL23AP42-201ENST00000471152 471 ntBASIC1.81□□□□□ -2.12
SLC6A13Q9NSD5 RNU6-1278P-201ENST00000516130 107 ntBASIC1.81□□□□□ -2.12
SLC6A13Q9NSD5 RNU6-1046P-201ENST00000516538 107 ntBASIC1.81□□□□□ -2.12
SLC6A13Q9NSD5 RNU6-897P-201ENST00000517135 105 ntBASIC1.81□□□□□ -2.12
SLC6A13Q9NSD5 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC1.81□□□□□ -2.12
SLC6A13Q9NSD5 AC131281.1-201ENST00000522984 164 ntBASIC1.81□□□□□ -2.12
SLC6A13Q9NSD5 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC1.81□□□□□ -2.12
SLC6A13Q9NSD5 AC136932.1-201ENST00000574771 208 ntBASIC1.81□□□□□ -2.12
SLC6A13Q9NSD5 MIR4719-201ENST00000585233 84 ntBASIC1.81□□□□□ -2.12
SLC6A13Q9NSD5 AC073413.2-201ENST00000604332 360 ntBASIC1.81□□□□□ -2.12
SLC6A13Q9NSD5 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC1.81□□□□□ -2.12
SLC6A13Q9NSD5 MIR376A1-201ENST00000616574 68 ntBASIC1.81□□□□□ -2.12
SLC6A13Q9NSD5 MIR219B-201ENST00000637023 88 ntBASIC1.81□□□□□ -2.12
SLC6A13Q9NSD5 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC1.8□□□□□ -2.12
SLC6A13Q9NSD5 SNORD114-1-201ENST00000362705 72 ntBASIC1.8□□□□□ -2.12
SLC6A13Q9NSD5 RNU6-505P-201ENST00000384427 107 ntBASIC1.8□□□□□ -2.12
SLC6A13Q9NSD5 RNU6-21P-201ENST00000384710 107 ntBASIC1.8□□□□□ -2.12
SLC6A13Q9NSD5 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC1.8□□□□□ -2.12
SLC6A13Q9NSD5 RNU2-61P-201ENST00000411069 191 ntBASIC1.8□□□□□ -2.12
SLC6A13Q9NSD5 ATP6V0E1P3-201ENST00000420036 246 ntBASIC1.8□□□□□ -2.12
SLC6A13Q9NSD5 HSPE1P9-201ENST00000440046 311 ntBASIC1.8□□□□□ -2.12
SLC6A13Q9NSD5 AC069023.1-201ENST00000442231 221 ntTSL 3 BASIC1.8□□□□□ -2.12
SLC6A13Q9NSD5 RPS27P1-201ENST00000450552 247 ntBASIC1.8□□□□□ -2.12
SLC6A13Q9NSD5 HSPE1P13-201ENST00000451143 297 ntBASIC1.8□□□□□ -2.12
SLC6A13Q9NSD5 RNU7-94P-201ENST00000459576 63 ntBASIC1.8□□□□□ -2.12
SLC6A13Q9NSD5 RN7SL274P-201ENST00000492268 272 ntBASIC1.8□□□□□ -2.12
SLC6A13Q9NSD5 RNU6-237P-201ENST00000515985 71 ntBASIC1.8□□□□□ -2.12
SLC6A13Q9NSD5 RNU6-436P-201ENST00000516171 114 ntBASIC1.8□□□□□ -2.12
SLC6A13Q9NSD5 AC092490.2-202ENST00000544922 462 ntTSL 3 BASIC1.8□□□□□ -2.12
SLC6A13Q9NSD5 MIR4300-201ENST00000581016 96 ntBASIC1.8□□□□□ -2.12
SLC6A13Q9NSD5 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC1.8□□□□□ -2.12
SLC6A13Q9NSD5 Y_RNA.812-201ENST00000610788 101 ntBASIC1.8□□□□□ -2.12
SLC6A13Q9NSD5 Y_RNA.784-201ENST00000613803 101 ntBASIC1.8□□□□□ -2.12
SLC6A13Q9NSD5 Y_RNA.787-201ENST00000616522 101 ntBASIC1.8□□□□□ -2.12
SLC6A13Q9NSD5 Y_RNA.780-201ENST00000617336 101 ntBASIC1.8□□□□□ -2.12
SLC6A13Q9NSD5 Y_RNA.801-201ENST00000619005 101 ntBASIC1.8□□□□□ -2.12
SLC6A13Q9NSD5 5S_rRNA.13-201ENST00000622298 123 ntBASIC1.8□□□□□ -2.12
SLC6A13Q9NSD5 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC1.8□□□□□ -2.12
SLC6A13Q9NSD5 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC1.8□□□□□ -2.12
SLC6A13Q9NSD5 RNU6-661P-201ENST00000362409 107 ntBASIC1.79□□□□□ -2.12
SLC6A13Q9NSD5 Y_RNA.152-201ENST00000363578 100 ntBASIC1.79□□□□□ -2.12
SLC6A13Q9NSD5 RNU6-117P-201ENST00000365415 107 ntBASIC1.79□□□□□ -2.12
SLC6A13Q9NSD5 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC1.79□□□□□ -2.12
SLC6A13Q9NSD5 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC1.79□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 109.8 ms