Protein–RNA interactions for Protein: Q9HCU0

CD248, Endosialin, humanhuman

Predictions only

Length 757 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD248Q9HCU0 RPS27P1-201ENST00000450552 247 ntBASIC2.93□□□□□ -1.94
CD248Q9HCU0 APOA2-205ENST00000468465 421 ntTSL 2 BASIC2.93□□□□□ -1.94
CD248Q9HCU0 SCGB1D5P-201ENST00000515134 247 ntBASIC2.93□□□□□ -1.94
CD248Q9HCU0 U7.2-201ENST00000607576 63 ntBASIC2.93□□□□□ -1.94
CD248Q9HCU0 AC026523.1-201ENST00000617221 490 ntTSL 5 BASIC2.93□□□□□ -1.94
CD248Q9HCU0 MIR7157-201ENST00000635801 60 ntBASIC2.93□□□□□ -1.94
CD248Q9HCU0 U6.115-201ENST00000636045 103 ntBASIC2.93□□□□□ -1.94
CD248Q9HCU0 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC2.93□□□□□ -1.94
CD248Q9HCU0 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC2.93□□□□□ -1.94
CD248Q9HCU0 ANKAR-201ENST00000313581 4391 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
CD248Q9HCU0 RNU6-529P-201ENST00000363383 104 ntBASIC2.92□□□□□ -1.94
CD248Q9HCU0 SNORA18.2-201ENST00000383865 132 ntBASIC2.92□□□□□ -1.94
CD248Q9HCU0 RNU6-301P-201ENST00000384277 107 ntBASIC2.92□□□□□ -1.94
CD248Q9HCU0 RNU6-429P-201ENST00000384582 108 ntBASIC2.92□□□□□ -1.94
CD248Q9HCU0 RNU6-19P-201ENST00000384718 107 ntBASIC2.92□□□□□ -1.94
CD248Q9HCU0 RNY4P18-201ENST00000391107 89 ntBASIC2.92□□□□□ -1.94
CD248Q9HCU0 MICF-203ENST00000432679 129 ntBASIC2.92□□□□□ -1.94
CD248Q9HCU0 RNU7-107P-201ENST00000459121 61 ntBASIC2.92□□□□□ -1.94
CD248Q9HCU0 CYCTP-201ENST00000504253 315 ntBASIC2.92□□□□□ -1.94
CD248Q9HCU0 RNU6-561P-201ENST00000516222 102 ntBASIC2.92□□□□□ -1.94
CD248Q9HCU0 AC090049.2-201ENST00000550377 109 ntBASIC2.92□□□□□ -1.94
CD248Q9HCU0 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC2.92□□□□□ -1.94
CD248Q9HCU0 RPS15AP11-201ENST00000594193 385 ntBASIC2.92□□□□□ -1.94
CD248Q9HCU0 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC2.92□□□□□ -1.94
CD248Q9HCU0 THOC2-201ENST00000245838 5609 ntAPPRIS P1 TSL 5 BASIC2.91□□□□□ -1.94
CD248Q9HCU0 IL6ST-201ENST00000336909 8776 ntAPPRIS P1 TSL 2 BASIC2.91□□□□□ -1.94
CD248Q9HCU0 PLS1-201ENST00000337777 3755 ntAPPRIS P1 TSL 1 (best) BASIC2.91□□□□□ -1.94
CD248Q9HCU0 RNU4-15P-201ENST00000362613 141 ntBASIC2.91□□□□□ -1.94
CD248Q9HCU0 Y_RNA.40-201ENST00000362645 93 ntBASIC2.91□□□□□ -1.94
CD248Q9HCU0 SNORA9.2-201ENST00000365361 133 ntBASIC2.91□□□□□ -1.94
CD248Q9HCU0 Y_RNA.361-201ENST00000365515 120 ntBASIC2.91□□□□□ -1.94
CD248Q9HCU0 Y_RNA.393-201ENST00000383936 102 ntBASIC2.91□□□□□ -1.94
CD248Q9HCU0 RNU6-748P-201ENST00000384648 107 ntBASIC2.91□□□□□ -1.94
CD248Q9HCU0 RNU6-476P-201ENST00000384726 107 ntBASIC2.91□□□□□ -1.94
CD248Q9HCU0 RNU6-588P-201ENST00000410281 105 ntBASIC2.91□□□□□ -1.94
CD248Q9HCU0 SNORA70.12-201ENST00000516084 153 ntBASIC2.91□□□□□ -1.94
CD248Q9HCU0 RNU2-44P-201ENST00000516795 194 ntBASIC2.91□□□□□ -1.94
CD248Q9HCU0 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC2.91□□□□□ -1.94
CD248Q9HCU0 AC025754.2-201ENST00000606491 432 ntBASIC2.91□□□□□ -1.94
CD248Q9HCU0 RNU6-91P-201ENST00000607774 107 ntBASIC2.91□□□□□ -1.94
CD248Q9HCU0 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC2.91□□□□□ -1.94
CD248Q9HCU0 MIR6129-201ENST00000616087 109 ntBASIC2.91□□□□□ -1.94
CD248Q9HCU0 AC023490.3-201ENST00000621762 358 ntTSL 3 BASIC2.91□□□□□ -1.94
CD248Q9HCU0 AP000550.4-201ENST00000639507 358 ntTSL 3 BASIC2.91□□□□□ -1.94
CD248Q9HCU0 RNU6-1298P-201ENST00000362456 101 ntBASIC2.9□□□□□ -1.95
CD248Q9HCU0 Y_RNA.43-201ENST00000362670 111 ntBASIC2.9□□□□□ -1.95
CD248Q9HCU0 RNU6-1010P-201ENST00000362757 107 ntBASIC2.9□□□□□ -1.95
CD248Q9HCU0 RNA5SP393-201ENST00000363423 117 ntBASIC2.9□□□□□ -1.95
CD248Q9HCU0 U3.8-201ENST00000363675 217 ntBASIC2.9□□□□□ -1.95
CD248Q9HCU0 AC063976.3-201ENST00000426849 329 ntBASIC2.9□□□□□ -1.95
CD248Q9HCU0 AC087499.2-201ENST00000432861 149 ntBASIC2.9□□□□□ -1.95
CD248Q9HCU0 HSPE1P21-201ENST00000438283 308 ntBASIC2.9□□□□□ -1.95
CD248Q9HCU0 KRTAP19-11P-201ENST00000439851 104 ntBASIC2.9□□□□□ -1.95
CD248Q9HCU0 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC2.9□□□□□ -1.95
CD248Q9HCU0 HSPE1P13-201ENST00000451143 297 ntBASIC2.9□□□□□ -1.95
CD248Q9HCU0 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC2.9□□□□□ -1.95
CD248Q9HCU0 AL441985.1-201ENST00000457727 251 ntBASIC2.9□□□□□ -1.95
CD248Q9HCU0 snoU13.14-201ENST00000459372 104 ntBASIC2.9□□□□□ -1.95
CD248Q9HCU0 SCARNA17.1-201ENST00000516211 143 ntBASIC2.9□□□□□ -1.95
CD248Q9HCU0 SCARNA17.2-201ENST00000516334 143 ntBASIC2.9□□□□□ -1.95
CD248Q9HCU0 SNORD19.2-201ENST00000516978 73 ntBASIC2.9□□□□□ -1.95
CD248Q9HCU0 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC2.9□□□□□ -1.95
CD248Q9HCU0 CYCSP26-201ENST00000534107 320 ntBASIC2.9□□□□□ -1.95
CD248Q9HCU0 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC2.9□□□□□ -1.95
CD248Q9HCU0 AC127455.1-201ENST00000565496 145 ntBASIC2.9□□□□□ -1.95
CD248Q9HCU0 AC091152.3-201ENST00000604227 325 ntBASIC2.9□□□□□ -1.95
CD248Q9HCU0 SCARNA17.4-201ENST00000614296 143 ntBASIC2.9□□□□□ -1.95
CD248Q9HCU0 ANP32E-209ENST00000616917 2989 ntTSL 2 BASIC2.9□□□□□ -1.95
CD248Q9HCU0 KCNIP4-IT1-201ENST00000627566 9848 ntBASIC2.9□□□□□ -1.95
CD248Q9HCU0 LCOR-205ENST00000421806 16004 ntTSL 3 BASIC2.89□□□□□ -1.95
CD248Q9HCU0 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
CD248Q9HCU0 SACS-201ENST00000382292 15324 ntAPPRIS P1 TSL 5 BASIC2.89□□□□□ -1.95
CD248Q9HCU0 SNORD114-19-201ENST00000363072 75 ntBASIC2.89□□□□□ -1.95
CD248Q9HCU0 RNU6-915P-201ENST00000364943 103 ntBASIC2.89□□□□□ -1.95
CD248Q9HCU0 RNU6-1144P-201ENST00000384247 104 ntBASIC2.89□□□□□ -1.95
CD248Q9HCU0 Y_RNA.525-201ENST00000384570 113 ntBASIC2.89□□□□□ -1.95
CD248Q9HCU0 RNU6-1072P-201ENST00000384703 107 ntBASIC2.89□□□□□ -1.95
CD248Q9HCU0 RNU6-443P-201ENST00000384780 107 ntBASIC2.89□□□□□ -1.95
CD248Q9HCU0 SNORA75.5-201ENST00000391291 81 ntBASIC2.89□□□□□ -1.95
CD248Q9HCU0 RNU2-49P-201ENST00000410666 184 ntBASIC2.89□□□□□ -1.95
CD248Q9HCU0 AIMP1P2-201ENST00000425294 312 ntBASIC2.89□□□□□ -1.95
CD248Q9HCU0 AL357134.1-201ENST00000445848 426 ntBASIC2.89□□□□□ -1.95
CD248Q9HCU0 SRIP1-201ENST00000489235 288 ntBASIC2.89□□□□□ -1.95
CD248Q9HCU0 AC145146.1-201ENST00000496370 254 ntBASIC2.89□□□□□ -1.95
CD248Q9HCU0 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC2.89□□□□□ -1.95
CD248Q9HCU0 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC2.89□□□□□ -1.95
CD248Q9HCU0 MIR5194-201ENST00000582634 120 ntBASIC2.89□□□□□ -1.95
CD248Q9HCU0 AL670379.2-201ENST00000604983 252 ntBASIC2.89□□□□□ -1.95
CD248Q9HCU0 AC012640.5-201ENST00000623897 319 ntBASIC2.89□□□□□ -1.95
CD248Q9HCU0 ZNF567-201ENST00000360729 2691 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
CD248Q9HCU0 AC010889.1-201ENST00000566193 2666 ntBASIC2.89□□□□□ -1.95
CD248Q9HCU0 AL136360.1-201ENST00000503377 1900 ntBASIC2.89□□□□□ -1.95
CD248Q9HCU0 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
CD248Q9HCU0 IL33-202ENST00000417746 2327 ntTSL 2 BASIC2.88□□□□□ -1.95
CD248Q9HCU0 TANK-201ENST00000259075 2152 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
CD248Q9HCU0 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC2.88□□□□□ -1.95
CD248Q9HCU0 Y_RNA.251-201ENST00000364551 99 ntBASIC2.88□□□□□ -1.95
CD248Q9HCU0 SNORA67.1-201ENST00000364749 141 ntBASIC2.88□□□□□ -1.95
CD248Q9HCU0 RNU1-138P-201ENST00000384093 164 ntBASIC2.88□□□□□ -1.95
CD248Q9HCU0 SNORA67.2-201ENST00000384300 149 ntBASIC2.88□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 217 ms