Protein–RNA interactions for Protein: Q9HCL0

PCDH18, Protocadherin-18, humanhuman

Predictions only

Length 1,135 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH18Q9HCL0 AC020743.3-201ENST00000440351 360 ntTSL 3 BASIC2.89□□□□□ -1.95
PCDH18Q9HCL0 SNRPGP8-201ENST00000454064 226 ntBASIC2.89□□□□□ -1.95
PCDH18Q9HCL0 snoU13.22-201ENST00000459428 104 ntBASIC2.89□□□□□ -1.95
PCDH18Q9HCL0 SEM1P1-201ENST00000506694 209 ntBASIC2.89□□□□□ -1.95
PCDH18Q9HCL0 SNORA70.24-201ENST00000517233 118 ntBASIC2.89□□□□□ -1.95
PCDH18Q9HCL0 RNU6-586P-201ENST00000517265 104 ntBASIC2.89□□□□□ -1.95
PCDH18Q9HCL0 MIR3605-201ENST00000583214 100 ntBASIC2.89□□□□□ -1.95
PCDH18Q9HCL0 ZNF861P-201ENST00000588126 639 ntBASIC2.89□□□□□ -1.95
PCDH18Q9HCL0 MIR1248-201ENST00000629190 106 ntBASIC2.89□□□□□ -1.95
PCDH18Q9HCL0 SLC6A15-202ENST00000309283 3108 ntTSL 5 BASIC2.89□□□□□ -1.95
PCDH18Q9HCL0 ZMYM1-210ENST00000611874 4466 ntAPPRIS P1 TSL 2 BASIC2.89□□□□□ -1.95
PCDH18Q9HCL0 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
PCDH18Q9HCL0 MIR26A1-201ENST00000362205 77 ntBASIC2.88□□□□□ -1.95
PCDH18Q9HCL0 RNU4-41P-201ENST00000364426 143 ntBASIC2.88□□□□□ -1.95
PCDH18Q9HCL0 Y_RNA.333-201ENST00000365274 102 ntBASIC2.88□□□□□ -1.95
PCDH18Q9HCL0 RNU6-438P-201ENST00000365561 103 ntBASIC2.88□□□□□ -1.95
PCDH18Q9HCL0 SNORD116-14-201ENST00000383894 92 ntBASIC2.88□□□□□ -1.95
PCDH18Q9HCL0 SNORD116-17-201ENST00000383929 92 ntBASIC2.88□□□□□ -1.95
PCDH18Q9HCL0 SNORD116-15-201ENST00000384445 92 ntBASIC2.88□□□□□ -1.95
PCDH18Q9HCL0 SNORD116-19-201ENST00000384729 92 ntBASIC2.88□□□□□ -1.95
PCDH18Q9HCL0 MIR300-201ENST00000401138 83 ntBASIC2.88□□□□□ -1.95
PCDH18Q9HCL0 AL135786.1-201ENST00000415892 214 ntBASIC2.88□□□□□ -1.95
PCDH18Q9HCL0 RPL30P4-201ENST00000429309 333 ntBASIC2.88□□□□□ -1.95
PCDH18Q9HCL0 AC074290.1-201ENST00000448883 135 ntBASIC2.88□□□□□ -1.95
PCDH18Q9HCL0 RPS27P22-201ENST00000478056 241 ntBASIC2.88□□□□□ -1.95
PCDH18Q9HCL0 AC010598.1-201ENST00000510378 103 ntBASIC2.88□□□□□ -1.95
PCDH18Q9HCL0 SNORA9.3-201ENST00000516383 129 ntBASIC2.88□□□□□ -1.95
PCDH18Q9HCL0 AC127455.1-201ENST00000565496 145 ntBASIC2.88□□□□□ -1.95
PCDH18Q9HCL0 MIR3199-1-201ENST00000582434 88 ntBASIC2.88□□□□□ -1.95
PCDH18Q9HCL0 AC005972.2-201ENST00000604690 348 ntBASIC2.88□□□□□ -1.95
PCDH18Q9HCL0 AC093732.2-201ENST00000607950 274 ntBASIC2.88□□□□□ -1.95
PCDH18Q9HCL0 FO624990.1-201ENST00000636373 85 ntBASIC2.88□□□□□ -1.95
PCDH18Q9HCL0 MIR7515-201ENST00000637837 67 ntBASIC2.88□□□□□ -1.95
PCDH18Q9HCL0 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC2.88□□□□□ -1.95
PCDH18Q9HCL0 CENPE-201ENST00000265148 8612 ntAPPRIS P1 TSL 2 BASIC2.88□□□□□ -1.95
PCDH18Q9HCL0 MAP3K2-203ENST00000409947 10992 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
PCDH18Q9HCL0 RNF219-AS1-214ENST00000607862 6001 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
PCDH18Q9HCL0 PIK3CA-201ENST00000263967 9093 ntAPPRIS P1 TSL 2 BASIC2.87□□□□□ -1.95
PCDH18Q9HCL0 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC2.87□□□□□ -1.95
PCDH18Q9HCL0 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC2.87□□□□□ -1.95
PCDH18Q9HCL0 RNU4-13P-201ENST00000364019 141 ntBASIC2.87□□□□□ -1.95
PCDH18Q9HCL0 Y_RNA.353-201ENST00000365440 108 ntBASIC2.87□□□□□ -1.95
PCDH18Q9HCL0 RNU6-376P-201ENST00000384731 106 ntBASIC2.87□□□□□ -1.95
PCDH18Q9HCL0 Y_RNA.629-201ENST00000411368 105 ntBASIC2.87□□□□□ -1.95
PCDH18Q9HCL0 AL135938.1-201ENST00000443141 297 ntBASIC2.87□□□□□ -1.95
PCDH18Q9HCL0 RNU7-107P-201ENST00000459121 61 ntBASIC2.87□□□□□ -1.95
PCDH18Q9HCL0 RNU6-221P-201ENST00000459541 99 ntBASIC2.87□□□□□ -1.95
PCDH18Q9HCL0 SNORA74D-201ENST00000516404 141 ntBASIC2.87□□□□□ -1.95
PCDH18Q9HCL0 SNORA31.15-201ENST00000516771 132 ntBASIC2.87□□□□□ -1.95
PCDH18Q9HCL0 AL929325.1-201ENST00000603096 117 ntBASIC2.87□□□□□ -1.95
PCDH18Q9HCL0 AP003357.1-201ENST00000604497 148 ntBASIC2.87□□□□□ -1.95
PCDH18Q9HCL0 RPL17P51-201ENST00000605218 238 ntBASIC2.87□□□□□ -1.95
PCDH18Q9HCL0 CACNB4-238ENST00000636901 7706 ntTSL 5 BASIC2.87□□□□□ -1.95
PCDH18Q9HCL0 NEDD4-208ENST00000508342 7235 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
PCDH18Q9HCL0 KIAA1841-211ENST00000612149 4202 ntTSL 5 BASIC2.86□□□□□ -1.95
PCDH18Q9HCL0 RNU6-486P-201ENST00000363116 107 ntBASIC2.86□□□□□ -1.95
PCDH18Q9HCL0 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC2.86□□□□□ -1.95
PCDH18Q9HCL0 RNU6-1083P-201ENST00000384022 107 ntBASIC2.86□□□□□ -1.95
PCDH18Q9HCL0 MIR128-1-201ENST00000384921 82 ntBASIC2.86□□□□□ -1.95
PCDH18Q9HCL0 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC2.86□□□□□ -1.95
PCDH18Q9HCL0 AC016909.1-201ENST00000415916 166 ntBASIC2.86□□□□□ -1.95
PCDH18Q9HCL0 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC2.86□□□□□ -1.95
PCDH18Q9HCL0 RPS27P1-201ENST00000450552 247 ntBASIC2.86□□□□□ -1.95
PCDH18Q9HCL0 HMGN2P18-201ENST00000450680 270 ntBASIC2.86□□□□□ -1.95
PCDH18Q9HCL0 RNU6-437P-201ENST00000459408 95 ntBASIC2.86□□□□□ -1.95
PCDH18Q9HCL0 AC025647.1-201ENST00000517879 253 ntBASIC2.86□□□□□ -1.95
PCDH18Q9HCL0 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC2.86□□□□□ -1.95
PCDH18Q9HCL0 PRELID2P1-201ENST00000552837 301 ntBASIC2.86□□□□□ -1.95
PCDH18Q9HCL0 MSMB-202ENST00000582163 488 ntAPPRIS P1 TSL 1 (best) BASIC2.86□□□□□ -1.95
PCDH18Q9HCL0 AC120024.3-201ENST00000603167 156 ntBASIC2.86□□□□□ -1.95
PCDH18Q9HCL0 5S_rRNA.13-201ENST00000622298 123 ntBASIC2.86□□□□□ -1.95
PCDH18Q9HCL0 AC010297.1-201ENST00000623948 149 ntBASIC2.86□□□□□ -1.95
PCDH18Q9HCL0 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC2.86□□□□□ -1.95
PCDH18Q9HCL0 OR2J3-203ENST00000641960 3342 ntAPPRIS P1 BASIC2.86□□□□□ -1.95
PCDH18Q9HCL0 AC138915.1-201ENST00000565427 1685 ntBASIC2.85□□□□□ -1.95
PCDH18Q9HCL0 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC2.85□□□□□ -1.95
PCDH18Q9HCL0 ZNF567-201ENST00000360729 2691 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
PCDH18Q9HCL0 RNU6-235P-201ENST00000362644 107 ntBASIC2.85□□□□□ -1.95
PCDH18Q9HCL0 SNORA25.6-201ENST00000364121 118 ntBASIC2.85□□□□□ -1.95
PCDH18Q9HCL0 Y_RNA.393-201ENST00000383936 102 ntBASIC2.85□□□□□ -1.95
PCDH18Q9HCL0 RNU6-80P-201ENST00000384195 107 ntBASIC2.85□□□□□ -1.95
PCDH18Q9HCL0 SNORA9-201ENST00000384215 133 ntBASIC2.85□□□□□ -1.95
PCDH18Q9HCL0 MIR491-201ENST00000384877 84 ntBASIC2.85□□□□□ -1.95
PCDH18Q9HCL0 SNORA48.2-201ENST00000390926 124 ntBASIC2.85□□□□□ -1.95
PCDH18Q9HCL0 FO393413.1-201ENST00000402892 195 ntBASIC2.85□□□□□ -1.95
PCDH18Q9HCL0 RAB6C-AS1-202ENST00000433431 123 ntBASIC2.85□□□□□ -1.95
PCDH18Q9HCL0 HSPE1P13-201ENST00000451143 297 ntBASIC2.85□□□□□ -1.95
PCDH18Q9HCL0 RPS29P12-201ENST00000460178 152 ntBASIC2.85□□□□□ -1.95
PCDH18Q9HCL0 AP001328.1-201ENST00000528550 176 ntBASIC2.85□□□□□ -1.95
PCDH18Q9HCL0 AC015720.1-201ENST00000565251 277 ntBASIC2.85□□□□□ -1.95
PCDH18Q9HCL0 MIR3117-201ENST00000584034 78 ntBASIC2.85□□□□□ -1.95
PCDH18Q9HCL0 AL049779.4-201ENST00000604500 156 ntBASIC2.85□□□□□ -1.95
PCDH18Q9HCL0 AL161756.2-201ENST00000604597 246 ntBASIC2.85□□□□□ -1.95
PCDH18Q9HCL0 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC2.85□□□□□ -1.95
PCDH18Q9HCL0 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
PCDH18Q9HCL0 AC245060.5-201ENST00000610778 3293 ntBASIC2.85□□□□□ -1.95
PCDH18Q9HCL0 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
PCDH18Q9HCL0 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC2.85□□□□□ -1.95
PCDH18Q9HCL0 APC-201ENST00000257430 10701 ntAPPRIS P1 TSL 5 BASIC2.84□□□□□ -1.95
PCDH18Q9HCL0 RNU6-271P-201ENST00000363858 105 ntBASIC2.84□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 116.9 ms