Protein–RNA interactions for Protein: Q96RL7

VPS13A, Vacuolar protein sorting-associated protein 13A, humanhuman

Predictions only

Length 3,174 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13AQ96RL7 AC006927.4-201ENST00000639187 543 ntBASIC-2.22□□□□□ -2.76
VPS13AQ96RL7 SNORD113-7-201ENST00000363762 77 ntBASIC-2.22□□□□□ -2.76
VPS13AQ96RL7 AF124730.1-201ENST00000430001 327 ntTSL 2 BASIC-2.22□□□□□ -2.76
VPS13AQ96RL7 MTND1P4-201ENST00000435196 415 ntBASIC-2.22□□□□□ -2.76
VPS13AQ96RL7 AC068993.2-201ENST00000546563 395 ntTSL 5 BASIC-2.22□□□□□ -2.76
VPS13AQ96RL7 Y_RNA.103-201ENST00000363171 102 ntBASIC-2.22□□□□□ -2.77
VPS13AQ96RL7 U8.17-201ENST00000391292 132 ntBASIC-2.22□□□□□ -2.77
VPS13AQ96RL7 RNU4-88P-201ENST00000411220 86 ntBASIC-2.22□□□□□ -2.77
VPS13AQ96RL7 DIAPH3-AS1-201ENST00000422052 428 ntTSL 3 BASIC-2.22□□□□□ -2.77
VPS13AQ96RL7 MIR4748-201ENST00000578076 82 ntBASIC-2.22□□□□□ -2.77
VPS13AQ96RL7 AC124016.2-201ENST00000610058 665 ntBASIC-2.22□□□□□ -2.77
VPS13AQ96RL7 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC-2.22□□□□□ -2.77
VPS13AQ96RL7 AP000568.1-201ENST00000282964 442 ntBASIC-2.23□□□□□ -2.77
VPS13AQ96RL7 Y_RNA.812-201ENST00000610788 101 ntBASIC-2.23□□□□□ -2.77
VPS13AQ96RL7 Y_RNA.784-201ENST00000613803 101 ntBASIC-2.23□□□□□ -2.77
VPS13AQ96RL7 Y_RNA.787-201ENST00000616522 101 ntBASIC-2.23□□□□□ -2.77
VPS13AQ96RL7 Y_RNA.780-201ENST00000617336 101 ntBASIC-2.23□□□□□ -2.77
VPS13AQ96RL7 Y_RNA.801-201ENST00000619005 101 ntBASIC-2.23□□□□□ -2.77
VPS13AQ96RL7 Y_RNA.212-201ENST00000364177 102 ntBASIC-2.23□□□□□ -2.77
VPS13AQ96RL7 Y_RNA.501-201ENST00000384467 103 ntBASIC-2.23□□□□□ -2.77
VPS13AQ96RL7 MIR10A-201ENST00000385043 110 ntBASIC-2.23□□□□□ -2.77
VPS13AQ96RL7 MIR320B1-201ENST00000390209 79 ntBASIC-2.23□□□□□ -2.77
VPS13AQ96RL7 UBE2D3P3-201ENST00000426992 425 ntBASIC-2.23□□□□□ -2.77
VPS13AQ96RL7 SCARNA15.2-201ENST00000516409 127 ntBASIC-2.23□□□□□ -2.77
VPS13AQ96RL7 MIR5704-201ENST00000584029 77 ntBASIC-2.23□□□□□ -2.77
VPS13AQ96RL7 AC018889.1-201ENST00000605372 397 ntBASIC-2.23□□□□□ -2.77
VPS13AQ96RL7 AL359075.3-201ENST00000613288 217 ntBASIC-2.23□□□□□ -2.77
VPS13AQ96RL7 U2.21-201ENST00000637295 81 ntBASIC-2.23□□□□□ -2.77
VPS13AQ96RL7 Y_RNA.7-201ENST00000362352 102 ntBASIC-2.24□□□□□ -2.77
VPS13AQ96RL7 RNY1P2-201ENST00000364820 117 ntBASIC-2.24□□□□□ -2.77
VPS13AQ96RL7 RNU6-438P-201ENST00000365561 103 ntBASIC-2.24□□□□□ -2.77
VPS13AQ96RL7 MIR8054-201ENST00000620877 86 ntBASIC-2.24□□□□□ -2.77
VPS13AQ96RL7 RNU6-1323P-201ENST00000384025 107 ntBASIC-2.24□□□□□ -2.77
VPS13AQ96RL7 RPS27AP14-201ENST00000422868 454 ntBASIC-2.24□□□□□ -2.77
VPS13AQ96RL7 LARP1BP3-201ENST00000437229 869 ntBASIC-2.24□□□□□ -2.77
VPS13AQ96RL7 AL512506.1-201ENST00000613918 449 ntBASIC-2.24□□□□□ -2.77
VPS13AQ96RL7 RNU6-393P-201ENST00000384475 107 ntBASIC-2.24□□□□□ -2.77
VPS13AQ96RL7 MIR520C-201ENST00000385005 87 ntBASIC-2.24□□□□□ -2.77
VPS13AQ96RL7 RNU6-817P-201ENST00000391083 104 ntBASIC-2.24□□□□□ -2.77
VPS13AQ96RL7 AL354692.1-201ENST00000423044 315 ntBASIC-2.24□□□□□ -2.77
VPS13AQ96RL7 HOTAIRM1_3.1-201ENST00000619974 59 ntBASIC-2.24□□□□□ -2.77
VPS13AQ96RL7 RNU6-487P-201ENST00000365430 104 ntBASIC-2.25□□□□□ -2.77
VPS13AQ96RL7 MIR513C-201ENST00000401352 84 ntBASIC-2.25□□□□□ -2.77
VPS13AQ96RL7 UQCRBP2-201ENST00000447827 297 ntBASIC-2.25□□□□□ -2.77
VPS13AQ96RL7 AC009646.1-201ENST00000510455 318 ntBASIC-2.25□□□□□ -2.77
VPS13AQ96RL7 MTND2P17-201ENST00000550281 688 ntBASIC-2.25□□□□□ -2.77
VPS13AQ96RL7 ZNF971P-201ENST00000562068 1249 ntBASIC-2.25□□□□□ -2.77
VPS13AQ96RL7 MALAT1-206ENST00000612781 234 ntTSL 3 BASIC-2.25□□□□□ -2.77
VPS13AQ96RL7 RNU6-1229P-201ENST00000364295 107 ntBASIC-2.25□□□□□ -2.77
VPS13AQ96RL7 Y_RNA.358-201ENST00000365491 99 ntBASIC-2.25□□□□□ -2.77
VPS13AQ96RL7 RNU6-1036P-201ENST00000383959 104 ntBASIC-2.25□□□□□ -2.77
VPS13AQ96RL7 MTCO2P33-201ENST00000402100 465 ntBASIC-2.25□□□□□ -2.77
VPS13AQ96RL7 RNU2-33P-201ENST00000410344 192 ntBASIC-2.25□□□□□ -2.77
VPS13AQ96RL7 AC106053.1-201ENST00000431697 368 ntTSL 3 BASIC-2.25□□□□□ -2.77
VPS13AQ96RL7 RNU7-94P-201ENST00000459576 63 ntBASIC-2.25□□□□□ -2.77
VPS13AQ96RL7 RNU6-1062P-201ENST00000383908 107 ntBASIC-2.26□□□□□ -2.77
VPS13AQ96RL7 RNU2-15P-201ENST00000410692 191 ntBASIC-2.26□□□□□ -2.77
VPS13AQ96RL7 Y_RNA.76-201ENST00000362931 109 ntBASIC-2.26□□□□□ -2.77
VPS13AQ96RL7 TRIM60P5Y-201ENST00000413946 574 ntBASIC-2.26□□□□□ -2.77
VPS13AQ96RL7 RNU7-59P-201ENST00000459101 61 ntBASIC-2.26□□□□□ -2.77
VPS13AQ96RL7 AC091965.4-201ENST00000607691 587 ntBASIC-2.26□□□□□ -2.77
VPS13AQ96RL7 AC133104.2-201ENST00000615272 193 ntBASIC-2.26□□□□□ -2.77
VPS13AQ96RL7 TTK-211ENST00000627129 240 ntTSL 5 BASIC-2.26□□□□□ -2.77
VPS13AQ96RL7 SNORD115-35-201ENST00000365122 82 ntBASIC-2.26□□□□□ -2.77
VPS13AQ96RL7 MTCYBP8-201ENST00000422855 651 ntBASIC-2.26□□□□□ -2.77
VPS13AQ96RL7 AC006458.1-201ENST00000445093 653 ntTSL 3 BASIC-2.26□□□□□ -2.77
VPS13AQ96RL7 POLR3GP1-201ENST00000594073 261 ntBASIC-2.26□□□□□ -2.77
VPS13AQ96RL7 AL049777.1-201ENST00000622740 518 ntBASIC-2.26□□□□□ -2.77
VPS13AQ96RL7 RNU6-1291P-201ENST00000516591 104 ntBASIC-2.27□□□□□ -2.77
VPS13AQ96RL7 LINC02155-201ENST00000519215 407 ntTSL 5 BASIC-2.27□□□□□ -2.77
VPS13AQ96RL7 AC090517.1-201ENST00000569307 266 ntBASIC-2.27□□□□□ -2.77
VPS13AQ96RL7 TPMTP2-201ENST00000414372 726 ntBASIC-2.27□□□□□ -2.77
VPS13AQ96RL7 LINC00894-208ENST00000455777 284 ntTSL 2 BASIC-2.27□□□□□ -2.77
VPS13AQ96RL7 AC104137.1-201ENST00000503625 385 ntTSL 3 BASIC-2.27□□□□□ -2.77
VPS13AQ96RL7 RNU7-12P-201ENST00000516030 62 ntBASIC-2.27□□□□□ -2.77
VPS13AQ96RL7 AL356804.1-201ENST00000553791 448 ntTSL 5 BASIC-2.27□□□□□ -2.77
VPS13AQ96RL7 MIR8068-201ENST00000618032 68 ntBASIC-2.27□□□□□ -2.77
VPS13AQ96RL7 AL136221.1-201ENST00000621449 509 ntBASIC-2.27□□□□□ -2.77
VPS13AQ96RL7 RNA5SP48-201ENST00000363969 126 ntBASIC-2.28□□□□□ -2.77
VPS13AQ96RL7 SKA2P1-201ENST00000425592 390 ntBASIC-2.28□□□□□ -2.77
VPS13AQ96RL7 ZNF736P5Y-201ENST00000451173 805 ntBASIC-2.28□□□□□ -2.77
VPS13AQ96RL7 AC025917.1-201ENST00000562062 612 ntTSL 3 BASIC-2.28□□□□□ -2.77
VPS13AQ96RL7 snoU2_19.1-201ENST00000362361 80 ntBASIC-2.28□□□□□ -2.77
VPS13AQ96RL7 SNORD114-19-201ENST00000363072 75 ntBASIC-2.28□□□□□ -2.77
VPS13AQ96RL7 RNU7-185P-201ENST00000459215 60 ntBASIC-2.28□□□□□ -2.77
VPS13AQ96RL7 AC124947.2-202ENST00000552735 133 ntBASIC-2.28□□□□□ -2.77
VPS13AQ96RL7 AC093519.1-201ENST00000566109 298 ntBASIC-2.28□□□□□ -2.77
VPS13AQ96RL7 AF127577.1-201ENST00000446301 562 ntTSL 3 BASIC-2.28□□□□□ -2.78
VPS13AQ96RL7 AC010468.3-201ENST00000508225 458 ntBASIC-2.28□□□□□ -2.78
VPS13AQ96RL7 RNU2-53P-201ENST00000516257 147 ntBASIC-2.28□□□□□ -2.78
VPS13AQ96RL7 RNU6-714P-201ENST00000516963 103 ntBASIC-2.29□□□□□ -2.78
VPS13AQ96RL7 AC245505.1-201ENST00000556398 224 ntBASIC-2.29□□□□□ -2.78
VPS13AQ96RL7 AL139022.2-201ENST00000606934 443 ntBASIC-2.29□□□□□ -2.78
VPS13AQ96RL7 MIR509-1-201ENST00000385265 94 ntBASIC-2.29□□□□□ -2.78
VPS13AQ96RL7 MIR509-2-201ENST00000390724 91 ntBASIC-2.29□□□□□ -2.78
VPS13AQ96RL7 RNU6-580P-201ENST00000365159 107 ntBASIC-2.3□□□□□ -2.78
VPS13AQ96RL7 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC-2.3□□□□□ -2.78
VPS13AQ96RL7 LINC02258-201ENST00000551280 777 ntTSL 2 BASIC-2.3□□□□□ -2.78
VPS13AQ96RL7 MIR4423-201ENST00000580922 80 ntBASIC-2.3□□□□□ -2.78
VPS13AQ96RL7 RNU6-1283P-201ENST00000365314 105 ntBASIC-2.3□□□□□ -2.78
Retrieved 100 of 98,524 protein–RNA pairs in 118 ms