Protein–RNA interactions for Protein: Q96PV0

SYNGAP1, Ras/Rap GTPase-activating protein SynGAP, humanhuman

Predictions only

Length 1,343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1Q96PV0 PALMD-205ENST00000615664 1844 ntTSL 5 BASIC3.41□□□□□ -1.86
SYNGAP1Q96PV0 LRRC70-201ENST00000334994 2249 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
SYNGAP1Q96PV0 LUZP4-201ENST00000371920 1701 ntAPPRIS P2 TSL 1 (best) BASIC3.41□□□□□ -1.86
SYNGAP1Q96PV0 Y_RNA.294-201ENST00000364916 102 ntBASIC3.41□□□□□ -1.86
SYNGAP1Q96PV0 RNY3P5-201ENST00000384127 102 ntBASIC3.41□□□□□ -1.86
SYNGAP1Q96PV0 AC245517.4-201ENST00000448601 281 ntBASIC3.41□□□□□ -1.86
SYNGAP1Q96PV0 HSPE1P13-201ENST00000451143 297 ntBASIC3.41□□□□□ -1.86
SYNGAP1Q96PV0 SNRPGP8-201ENST00000454064 226 ntBASIC3.41□□□□□ -1.86
SYNGAP1Q96PV0 AC010598.1-201ENST00000510378 103 ntBASIC3.41□□□□□ -1.86
SYNGAP1Q96PV0 RNA5SP112-201ENST00000515937 99 ntBASIC3.41□□□□□ -1.86
SYNGAP1Q96PV0 SNORA31.1-201ENST00000515993 133 ntBASIC3.41□□□□□ -1.86
SYNGAP1Q96PV0 SNORA31.5-201ENST00000516190 133 ntBASIC3.41□□□□□ -1.86
SYNGAP1Q96PV0 RNU6-659P-201ENST00000516454 104 ntBASIC3.41□□□□□ -1.86
SYNGAP1Q96PV0 RNU7-116P-201ENST00000516940 62 ntBASIC3.41□□□□□ -1.86
SYNGAP1Q96PV0 LINC02253-201ENST00000559321 448 ntTSL 2 BASIC3.41□□□□□ -1.86
SYNGAP1Q96PV0 MIR378D2-201ENST00000580636 98 ntBASIC3.41□□□□□ -1.86
SYNGAP1Q96PV0 AC107294.3-201ENST00000609211 526 ntBASIC3.41□□□□□ -1.86
SYNGAP1Q96PV0 AP001340.1-201ENST00000624405 217 ntBASIC3.41□□□□□ -1.86
SYNGAP1Q96PV0 AC002546.1-201ENST00000588041 2504 ntBASIC3.41□□□□□ -1.86
SYNGAP1Q96PV0 RNU6-438P-201ENST00000365561 103 ntBASIC3.4□□□□□ -1.87
SYNGAP1Q96PV0 MIR764-201ENST00000390811 85 ntBASIC3.4□□□□□ -1.87
SYNGAP1Q96PV0 MIR1278-201ENST00000408753 81 ntBASIC3.4□□□□□ -1.87
SYNGAP1Q96PV0 AL031386.1-201ENST00000411940 142 ntTSL 5 BASIC3.4□□□□□ -1.87
SYNGAP1Q96PV0 AL135786.1-201ENST00000415892 214 ntBASIC3.4□□□□□ -1.87
SYNGAP1Q96PV0 AC108938.1-201ENST00000451204 136 ntBASIC3.4□□□□□ -1.87
SYNGAP1Q96PV0 RN7SKP179-201ENST00000516126 217 ntBASIC3.4□□□□□ -1.87
SYNGAP1Q96PV0 RNA5SP24-201ENST00000516478 95 ntBASIC3.4□□□□□ -1.87
SYNGAP1Q96PV0 AC107016.2-201ENST00000547968 190 ntBASIC3.4□□□□□ -1.87
SYNGAP1Q96PV0 MTND5P34-201ENST00000568888 325 ntBASIC3.4□□□□□ -1.87
SYNGAP1Q96PV0 AC120024.3-201ENST00000603167 156 ntBASIC3.4□□□□□ -1.87
SYNGAP1Q96PV0 AC091564.4-201ENST00000533934 2194 ntBASIC3.4□□□□□ -1.87
SYNGAP1Q96PV0 PIK3C2G-201ENST00000266497 4764 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
SYNGAP1Q96PV0 VNN1-201ENST00000367928 3106 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
SYNGAP1Q96PV0 HDX-201ENST00000297977 6200 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
SYNGAP1Q96PV0 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC3.39□□□□□ -1.87
SYNGAP1Q96PV0 RNU6-234P-201ENST00000365229 104 ntBASIC3.39□□□□□ -1.87
SYNGAP1Q96PV0 RNU6-1323P-201ENST00000384025 107 ntBASIC3.39□□□□□ -1.87
SYNGAP1Q96PV0 RNU6-418P-201ENST00000384035 107 ntBASIC3.39□□□□□ -1.87
SYNGAP1Q96PV0 RNU6-1064P-201ENST00000410626 104 ntBASIC3.39□□□□□ -1.87
SYNGAP1Q96PV0 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC3.39□□□□□ -1.87
SYNGAP1Q96PV0 AL591806.2-201ENST00000433122 173 ntBASIC3.39□□□□□ -1.87
SYNGAP1Q96PV0 UQCRHP3-201ENST00000451503 251 ntBASIC3.39□□□□□ -1.87
SYNGAP1Q96PV0 RPS27P26-201ENST00000494583 239 ntBASIC3.39□□□□□ -1.87
SYNGAP1Q96PV0 RNU5E-3P-201ENST00000515913 68 ntBASIC3.39□□□□□ -1.87
SYNGAP1Q96PV0 RNA5SP380-201ENST00000517190 98 ntBASIC3.39□□□□□ -1.87
SYNGAP1Q96PV0 AC090049.2-201ENST00000550377 109 ntBASIC3.39□□□□□ -1.87
SYNGAP1Q96PV0 Y_RNA.757-201ENST00000578934 114 ntBASIC3.39□□□□□ -1.87
SYNGAP1Q96PV0 MIR6129-201ENST00000616087 109 ntBASIC3.39□□□□□ -1.87
SYNGAP1Q96PV0 DNAH12-208ENST00000495027 12146 ntAPPRIS P1 TSL 5 BASIC3.39□□□□□ -1.87
SYNGAP1Q96PV0 FRS2-201ENST00000397997 6550 ntAPPRIS P1 TSL 5 BASIC3.38□□□□□ -1.87
SYNGAP1Q96PV0 CUL3-204ENST00000409777 3147 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
SYNGAP1Q96PV0 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
SYNGAP1Q96PV0 SLC27A2-203ENST00000544960 2025 ntTSL 2 BASIC3.38□□□□□ -1.87
SYNGAP1Q96PV0 OR2L2-203ENST00000642011 4225 ntAPPRIS P1 BASIC3.38□□□□□ -1.87
SYNGAP1Q96PV0 SNORD114-7-201ENST00000362520 77 ntBASIC3.38□□□□□ -1.87
SYNGAP1Q96PV0 RNU6-944P-201ENST00000364023 107 ntBASIC3.38□□□□□ -1.87
SYNGAP1Q96PV0 Y_RNA.355-201ENST00000365462 98 ntBASIC3.38□□□□□ -1.87
SYNGAP1Q96PV0 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC3.38□□□□□ -1.87
SYNGAP1Q96PV0 SNORA46-201ENST00000384762 135 ntBASIC3.38□□□□□ -1.87
SYNGAP1Q96PV0 RPL21P3-201ENST00000395517 478 ntBASIC3.38□□□□□ -1.87
SYNGAP1Q96PV0 RNA5SP511-201ENST00000410487 115 ntBASIC3.38□□□□□ -1.87
SYNGAP1Q96PV0 AL359853.2-201ENST00000442108 353 ntTSL 2 BASIC3.38□□□□□ -1.87
SYNGAP1Q96PV0 RPS27P22-201ENST00000478056 241 ntBASIC3.38□□□□□ -1.87
SYNGAP1Q96PV0 RN7SL20P-201ENST00000488827 297 ntBASIC3.38□□□□□ -1.87
SYNGAP1Q96PV0 AC023043.3-201ENST00000593113 385 ntBASIC3.38□□□□□ -1.87
SYNGAP1Q96PV0 AC012640.5-201ENST00000623897 319 ntBASIC3.38□□□□□ -1.87
SYNGAP1Q96PV0 AC064859.1-201ENST00000624741 174 ntBASIC3.38□□□□□ -1.87
SYNGAP1Q96PV0 AC010733.2-201ENST00000589496 5702 ntBASIC3.38□□□□□ -1.87
SYNGAP1Q96PV0 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC3.37□□□□□ -1.87
SYNGAP1Q96PV0 Y_RNA.432-201ENST00000384087 111 ntBASIC3.37□□□□□ -1.87
SYNGAP1Q96PV0 RNU6-975P-201ENST00000384296 105 ntBASIC3.37□□□□□ -1.87
SYNGAP1Q96PV0 RNU6-1274P-201ENST00000384557 107 ntBASIC3.37□□□□□ -1.87
SYNGAP1Q96PV0 RNU4-43P-201ENST00000410628 137 ntBASIC3.37□□□□□ -1.87
SYNGAP1Q96PV0 AC009414.1-201ENST00000427200 443 ntBASIC3.37□□□□□ -1.87
SYNGAP1Q96PV0 AC245047.4-201ENST00000433189 144 ntBASIC3.37□□□□□ -1.87
SYNGAP1Q96PV0 TRBV25OR9-2-201ENST00000438417 374 ntBASIC3.37□□□□□ -1.87
SYNGAP1Q96PV0 RNU6-221P-201ENST00000459541 99 ntBASIC3.37□□□□□ -1.87
SYNGAP1Q96PV0 AC092666.1-201ENST00000492054 573 ntTSL 4 BASIC3.37□□□□□ -1.87
SYNGAP1Q96PV0 ATP5EP1-201ENST00000510257 156 ntBASIC3.37□□□□□ -1.87
SYNGAP1Q96PV0 RN7SKP132-201ENST00000516001 208 ntBASIC3.37□□□□□ -1.87
SYNGAP1Q96PV0 RNU6-965P-201ENST00000516721 96 ntBASIC3.37□□□□□ -1.87
SYNGAP1Q96PV0 AC109329.2-201ENST00000519658 482 ntBASIC3.37□□□□□ -1.87
SYNGAP1Q96PV0 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC3.37□□□□□ -1.87
SYNGAP1Q96PV0 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
SYNGAP1Q96PV0 MUM1L1-203ENST00000372552 3957 ntAPPRIS P1 TSL 5 BASIC3.36□□□□□ -1.87
SYNGAP1Q96PV0 RNU6-834P-201ENST00000362367 110 ntBASIC3.36□□□□□ -1.87
SYNGAP1Q96PV0 U8.2-201ENST00000363156 134 ntBASIC3.36□□□□□ -1.87
SYNGAP1Q96PV0 SNORA25.7-201ENST00000364375 127 ntBASIC3.36□□□□□ -1.87
SYNGAP1Q96PV0 RNA5SP496-201ENST00000391240 109 ntBASIC3.36□□□□□ -1.87
SYNGAP1Q96PV0 RNU6-1077P-201ENST00000410506 102 ntBASIC3.36□□□□□ -1.87
SYNGAP1Q96PV0 AC005160.1-201ENST00000432405 381 ntTSL 3 BASIC3.36□□□□□ -1.87
SYNGAP1Q96PV0 AC023449.1-201ENST00000454464 154 ntBASIC3.36□□□□□ -1.87
SYNGAP1Q96PV0 PDCD5P2-201ENST00000507570 312 ntBASIC3.36□□□□□ -1.87
SYNGAP1Q96PV0 SCGB1D5P-201ENST00000515134 247 ntBASIC3.36□□□□□ -1.87
SYNGAP1Q96PV0 RNU6-1299P-201ENST00000516316 100 ntBASIC3.36□□□□□ -1.87
SYNGAP1Q96PV0 RNU6-948P-201ENST00000516374 107 ntBASIC3.36□□□□□ -1.87
SYNGAP1Q96PV0 UCA1.1-201ENST00000620952 75 ntBASIC3.36□□□□□ -1.87
SYNGAP1Q96PV0 AC007318.2-201ENST00000620999 243 ntBASIC3.36□□□□□ -1.87
SYNGAP1Q96PV0 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC3.36□□□□□ -1.87
SYNGAP1Q96PV0 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC3.36□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 117.6 ms