Protein–RNA interactions for Protein: Q8WWV3

RTN4IP1, Reticulon-4-interacting protein 1, mitochondrial, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4IP1Q8WWV3 AL359821.1-201ENST00000605519 182 ntBASIC0.86□□□□□ -2.27
RTN4IP1Q8WWV3 AC104260.1-201ENST00000616660 539 ntBASIC0.86□□□□□ -2.27
RTN4IP1Q8WWV3 PISRT1.1-201ENST00000616930 107 ntBASIC0.86□□□□□ -2.27
RTN4IP1Q8WWV3 CDKN3-212ENST00000620759 196 ntTSL 5 BASIC0.86□□□□□ -2.27
RTN4IP1Q8WWV3 MIR6079-201ENST00000635807 62 ntBASIC0.86□□□□□ -2.27
RTN4IP1Q8WWV3 U6.115-201ENST00000636045 103 ntBASIC0.86□□□□□ -2.27
RTN4IP1Q8WWV3 TPTEP1-208ENST00000636884 213 ntBASIC0.86□□□□□ -2.27
RTN4IP1Q8WWV3 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC0.86□□□□□ -2.27
RTN4IP1Q8WWV3 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC0.85□□□□□ -2.27
RTN4IP1Q8WWV3 RNU6-1123P-201ENST00000362347 106 ntBASIC0.85□□□□□ -2.27
RTN4IP1Q8WWV3 RNU6ATAC25P-201ENST00000408798 117 ntBASIC0.85□□□□□ -2.27
RTN4IP1Q8WWV3 MRPS18CP6-201ENST00000423587 223 ntBASIC0.85□□□□□ -2.27
RTN4IP1Q8WWV3 RAB28P5-201ENST00000427490 651 ntBASIC0.85□□□□□ -2.27
RTN4IP1Q8WWV3 CALM2P4-201ENST00000430810 426 ntBASIC0.85□□□□□ -2.27
RTN4IP1Q8WWV3 RPL23AP50-201ENST00000434149 455 ntBASIC0.85□□□□□ -2.27
RTN4IP1Q8WWV3 AL603825.1-201ENST00000438481 80 ntBASIC0.85□□□□□ -2.27
RTN4IP1Q8WWV3 PCNPP5-201ENST00000452246 481 ntBASIC0.85□□□□□ -2.27
RTN4IP1Q8WWV3 MTCO3P10-201ENST00000455912 772 ntBASIC0.85□□□□□ -2.27
RTN4IP1Q8WWV3 RPL17P19-201ENST00000489069 552 ntBASIC0.85□□□□□ -2.27
RTN4IP1Q8WWV3 AC105758.1-201ENST00000506038 399 ntBASIC0.85□□□□□ -2.27
RTN4IP1Q8WWV3 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC0.85□□□□□ -2.27
RTN4IP1Q8WWV3 SNORA40.9-201ENST00000515895 93 ntBASIC0.85□□□□□ -2.27
RTN4IP1Q8WWV3 RNU4ATAC11P-201ENST00000515939 126 ntBASIC0.85□□□□□ -2.27
RTN4IP1Q8WWV3 RNU6-63P-201ENST00000516690 95 ntBASIC0.85□□□□□ -2.27
RTN4IP1Q8WWV3 RNU7-172P-201ENST00000517125 64 ntBASIC0.85□□□□□ -2.27
RTN4IP1Q8WWV3 RNU6-165P-201ENST00000517170 99 ntBASIC0.85□□□□□ -2.27
RTN4IP1Q8WWV3 HSPE1P19-201ENST00000603327 295 ntBASIC0.85□□□□□ -2.27
RTN4IP1Q8WWV3 SNORD114-21-201ENST00000606412 72 ntBASIC0.85□□□□□ -2.27
RTN4IP1Q8WWV3 U6atac.1-201ENST00000616025 117 ntBASIC0.85□□□□□ -2.27
RTN4IP1Q8WWV3 AC091895.1-201ENST00000624494 256 ntBASIC0.85□□□□□ -2.27
RTN4IP1Q8WWV3 AC099654.5-201ENST00000636479 350 ntBASIC0.85□□□□□ -2.27
RTN4IP1Q8WWV3 AC068647.2-201ENST00000637380 353 ntBASIC0.85□□□□□ -2.27
RTN4IP1Q8WWV3 AC005592.1-201ENST00000566527 1640 ntBASIC0.85□□□□□ -2.27
RTN4IP1Q8WWV3 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC0.84□□□□□ -2.27
RTN4IP1Q8WWV3 ANKRD30BP1-201ENST00000451052 2186 ntBASIC0.84□□□□□ -2.27
RTN4IP1Q8WWV3 SNORA27.1-201ENST00000362604 124 ntBASIC0.84□□□□□ -2.27
RTN4IP1Q8WWV3 RNU5F-3P-201ENST00000363767 117 ntBASIC0.84□□□□□ -2.27
RTN4IP1Q8WWV3 RNU6-1188P-201ENST00000363795 107 ntBASIC0.84□□□□□ -2.27
RTN4IP1Q8WWV3 RNU6-961P-201ENST00000363893 105 ntBASIC0.84□□□□□ -2.27
RTN4IP1Q8WWV3 Y_RNA.267-201ENST00000364679 109 ntBASIC0.84□□□□□ -2.27
RTN4IP1Q8WWV3 RNU6-392P-201ENST00000364926 101 ntBASIC0.84□□□□□ -2.27
RTN4IP1Q8WWV3 RNU6-53P-201ENST00000365367 106 ntBASIC0.84□□□□□ -2.27
RTN4IP1Q8WWV3 RNU6-926P-201ENST00000384075 107 ntBASIC0.84□□□□□ -2.27
RTN4IP1Q8WWV3 Y_RNA.474-201ENST00000384341 102 ntBASIC0.84□□□□□ -2.27
RTN4IP1Q8WWV3 RNU6-505P-201ENST00000384427 107 ntBASIC0.84□□□□□ -2.27
RTN4IP1Q8WWV3 Y_RNA.498-201ENST00000384460 102 ntBASIC0.84□□□□□ -2.27
RTN4IP1Q8WWV3 RNU6-136P-201ENST00000384663 107 ntBASIC0.84□□□□□ -2.27
RTN4IP1Q8WWV3 RNU6ATAC15P-201ENST00000408279 121 ntBASIC0.84□□□□□ -2.27
RTN4IP1Q8WWV3 SNORD12B-201ENST00000410433 91 ntBASIC0.84□□□□□ -2.27
RTN4IP1Q8WWV3 RN7SKP200-201ENST00000410564 320 ntBASIC0.84□□□□□ -2.27
RTN4IP1Q8WWV3 AC006159.2-201ENST00000421965 692 ntTSL 2 BASIC0.84□□□□□ -2.27
RTN4IP1Q8WWV3 SNX2P2-201ENST00000424553 323 ntBASIC0.84□□□□□ -2.27
RTN4IP1Q8WWV3 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC0.84□□□□□ -2.27
RTN4IP1Q8WWV3 RNU6-625P-201ENST00000459412 107 ntBASIC0.84□□□□□ -2.27
RTN4IP1Q8WWV3 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC0.84□□□□□ -2.27
RTN4IP1Q8WWV3 AC022493.2-201ENST00000506122 481 ntBASIC0.84□□□□□ -2.27
RTN4IP1Q8WWV3 AC108729.3-201ENST00000513484 108 ntBASIC0.84□□□□□ -2.27
RTN4IP1Q8WWV3 RNA5SP20-201ENST00000515976 84 ntBASIC0.84□□□□□ -2.27
RTN4IP1Q8WWV3 RNU6-966P-201ENST00000516479 104 ntBASIC0.84□□□□□ -2.27
RTN4IP1Q8WWV3 RNU6-1291P-201ENST00000516591 104 ntBASIC0.84□□□□□ -2.27
RTN4IP1Q8WWV3 RN7SKP49-201ENST00000516675 260 ntBASIC0.84□□□□□ -2.27
RTN4IP1Q8WWV3 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC0.84□□□□□ -2.27
RTN4IP1Q8WWV3 RAB11AP2-201ENST00000545905 639 ntBASIC0.84□□□□□ -2.27
RTN4IP1Q8WWV3 CR383656.11-201ENST00000552261 498 ntTSL 3 BASIC0.84□□□□□ -2.27
RTN4IP1Q8WWV3 MIR3664-201ENST00000579074 99 ntBASIC0.84□□□□□ -2.27
RTN4IP1Q8WWV3 AC091178.2-201ENST00000584401 117 ntBASIC0.84□□□□□ -2.27
RTN4IP1Q8WWV3 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC0.84□□□□□ -2.28
RTN4IP1Q8WWV3 SNORA1B-201ENST00000362535 133 ntBASIC0.83□□□□□ -2.28
RTN4IP1Q8WWV3 Y_RNA.166-201ENST00000363730 102 ntBASIC0.83□□□□□ -2.28
RTN4IP1Q8WWV3 RNU6-890P-201ENST00000384121 107 ntBASIC0.83□□□□□ -2.28
RTN4IP1Q8WWV3 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC0.83□□□□□ -2.28
RTN4IP1Q8WWV3 U8.16-201ENST00000391279 133 ntBASIC0.83□□□□□ -2.28
RTN4IP1Q8WWV3 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC0.83□□□□□ -2.28
RTN4IP1Q8WWV3 RPL23AP36-201ENST00000413895 458 ntBASIC0.83□□□□□ -2.28
RTN4IP1Q8WWV3 LINC01870-201ENST00000427042 390 ntTSL 3 BASIC0.83□□□□□ -2.28
RTN4IP1Q8WWV3 AC093850.1-201ENST00000454121 251 ntBASIC0.83□□□□□ -2.28
RTN4IP1Q8WWV3 MIR2053-201ENST00000459295 91 ntBASIC0.83□□□□□ -2.28
RTN4IP1Q8WWV3 RNU7-169P-201ENST00000459456 61 ntBASIC0.83□□□□□ -2.28
RTN4IP1Q8WWV3 RNU6-922P-201ENST00000516753 99 ntBASIC0.83□□□□□ -2.28
RTN4IP1Q8WWV3 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC0.83□□□□□ -2.28
RTN4IP1Q8WWV3 AC022306.2-201ENST00000617563 647 ntBASIC0.83□□□□□ -2.28
RTN4IP1Q8WWV3 SNORD3E-202ENST00000627253 216 ntBASIC0.83□□□□□ -2.28
RTN4IP1Q8WWV3 MIR3674-201ENST00000636576 68 ntBASIC0.83□□□□□ -2.28
RTN4IP1Q8WWV3 RNU6-1283P-201ENST00000365314 105 ntBASIC0.82□□□□□ -2.28
RTN4IP1Q8WWV3 RNU6-117P-201ENST00000365415 107 ntBASIC0.82□□□□□ -2.28
RTN4IP1Q8WWV3 RNU6-708P-201ENST00000384217 107 ntBASIC0.82□□□□□ -2.28
RTN4IP1Q8WWV3 RNU6-1065P-201ENST00000384513 106 ntBASIC0.82□□□□□ -2.28
RTN4IP1Q8WWV3 MTCO3P19-201ENST00000415864 321 ntBASIC0.82□□□□□ -2.28
RTN4IP1Q8WWV3 RBMX2P4-201ENST00000441256 376 ntBASIC0.82□□□□□ -2.28
RTN4IP1Q8WWV3 AL137792.2-201ENST00000443484 235 ntBASIC0.82□□□□□ -2.28
RTN4IP1Q8WWV3 OR9P1P-201ENST00000496431 281 ntBASIC0.82□□□□□ -2.28
RTN4IP1Q8WWV3 RNU6-408P-201ENST00000515910 100 ntBASIC0.82□□□□□ -2.28
RTN4IP1Q8WWV3 RNA5SP168-201ENST00000516642 112 ntBASIC0.82□□□□□ -2.28
RTN4IP1Q8WWV3 RNU6-1116P-201ENST00000517269 99 ntBASIC0.82□□□□□ -2.28
RTN4IP1Q8WWV3 AC023442.1-201ENST00000531247 422 ntBASIC0.82□□□□□ -2.28
RTN4IP1Q8WWV3 AC080078.3-201ENST00000605407 463 ntBASIC0.82□□□□□ -2.28
RTN4IP1Q8WWV3 WT1-AS_8.1-201ENST00000615200 275 ntBASIC0.82□□□□□ -2.28
RTN4IP1Q8WWV3 MIR8065-201ENST00000620577 100 ntBASIC0.82□□□□□ -2.28
RTN4IP1Q8WWV3 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC0.82□□□□□ -2.28
RTN4IP1Q8WWV3 AC006435.5-201ENST00000624486 112 ntBASIC0.82□□□□□ -2.28
Retrieved 100 of 98,524 protein–RNA pairs in 178.9 ms