Protein–RNA interactions for Protein: Q8NCU8

LINC00116, Uncharacterized protein encoded by LINC00116, humanhuman

Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00116Q8NCU8 RNU6-944P-201ENST00000364023 107 ntBASIC3.16□□□□□ -1.9
LINC00116Q8NCU8 RNU6-407P-201ENST00000365280 104 ntBASIC3.16□□□□□ -1.9
LINC00116Q8NCU8 SNORD116-13-201ENST00000384408 92 ntBASIC3.16□□□□□ -1.9
LINC00116Q8NCU8 TRAJ17-201ENST00000390520 63 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
LINC00116Q8NCU8 RNU6-57P-201ENST00000411348 103 ntBASIC3.16□□□□□ -1.9
LINC00116Q8NCU8 AC103810.6-201ENST00000606708 136 ntBASIC3.16□□□□□ -1.9
LINC00116Q8NCU8 AC012531.5-201ENST00000611375 151 ntBASIC3.16□□□□□ -1.9
LINC00116Q8NCU8 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC3.16□□□□□ -1.9
LINC00116Q8NCU8 AASDH-207ENST00000513376 3241 ntTSL 1 (best) BASIC3.15□□□□□ -1.9
LINC00116Q8NCU8 AGTR1-204ENST00000418473 2071 ntTSL 5 BASIC3.15□□□□□ -1.9
LINC00116Q8NCU8 SNORA27.1-201ENST00000362604 124 ntBASIC3.15□□□□□ -1.91
LINC00116Q8NCU8 RNU6-271P-201ENST00000363858 105 ntBASIC3.15□□□□□ -1.91
LINC00116Q8NCU8 RNA5SP99-201ENST00000364020 114 ntBASIC3.15□□□□□ -1.91
LINC00116Q8NCU8 RNU6-234P-201ENST00000365229 104 ntBASIC3.15□□□□□ -1.91
LINC00116Q8NCU8 RNU6-728P-201ENST00000365375 104 ntBASIC3.15□□□□□ -1.91
LINC00116Q8NCU8 RNU6-643P-201ENST00000384018 107 ntBASIC3.15□□□□□ -1.91
LINC00116Q8NCU8 MTND4LP9-201ENST00000427694 174 ntBASIC3.15□□□□□ -1.91
LINC00116Q8NCU8 AC008267.6-201ENST00000441664 139 ntBASIC3.15□□□□□ -1.91
LINC00116Q8NCU8 AC016717.1-201ENST00000448918 286 ntBASIC3.15□□□□□ -1.91
LINC00116Q8NCU8 HSPE1P13-201ENST00000451143 297 ntBASIC3.15□□□□□ -1.91
LINC00116Q8NCU8 SNORD65B-201ENST00000459126 73 ntBASIC3.15□□□□□ -1.91
LINC00116Q8NCU8 ATP5EP1-201ENST00000510257 156 ntBASIC3.15□□□□□ -1.91
LINC00116Q8NCU8 AC010598.1-201ENST00000510378 103 ntBASIC3.15□□□□□ -1.91
LINC00116Q8NCU8 RNU6-971P-201ENST00000516920 106 ntBASIC3.15□□□□□ -1.91
LINC00116Q8NCU8 AC112693.2-201ENST00000556538 232 ntBASIC3.15□□□□□ -1.91
LINC00116Q8NCU8 POLR3GP1-201ENST00000594073 261 ntBASIC3.15□□□□□ -1.91
LINC00116Q8NCU8 AC027045.1-201ENST00000609065 202 ntTSL 5 BASIC3.15□□□□□ -1.91
LINC00116Q8NCU8 AC110079.1-202ENST00000635213 138 ntBASIC3.15□□□□□ -1.91
LINC00116Q8NCU8 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
LINC00116Q8NCU8 WDR49-201ENST00000308378 2594 ntAPPRIS P2 TSL 1 (best) BASIC3.15□□□□□ -1.91
LINC00116Q8NCU8 CADM2-AS1-201ENST00000476021 2656 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
LINC00116Q8NCU8 AL159152.1-201ENST00000635019 2587 ntBASIC3.14□□□□□ -1.91
LINC00116Q8NCU8 TAB3-205ENST00000378933 6671 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
LINC00116Q8NCU8 RNU6-975P-201ENST00000384296 105 ntBASIC3.14□□□□□ -1.91
LINC00116Q8NCU8 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC3.14□□□□□ -1.91
LINC00116Q8NCU8 TRBV25OR9-2-201ENST00000438417 374 ntBASIC3.14□□□□□ -1.91
LINC00116Q8NCU8 AL359853.2-201ENST00000442108 353 ntTSL 2 BASIC3.14□□□□□ -1.91
LINC00116Q8NCU8 RNU6-221P-201ENST00000459541 99 ntBASIC3.14□□□□□ -1.91
LINC00116Q8NCU8 RNU6-586P-201ENST00000517265 104 ntBASIC3.14□□□□□ -1.91
LINC00116Q8NCU8 AC012254.1-201ENST00000592747 200 ntTSL 3 BASIC3.14□□□□□ -1.91
LINC00116Q8NCU8 AC023043.3-201ENST00000593113 385 ntBASIC3.14□□□□□ -1.91
LINC00116Q8NCU8 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC3.14□□□□□ -1.91
LINC00116Q8NCU8 AC093010.3-201ENST00000570269 15214 ntBASIC3.14□□□□□ -1.91
LINC00116Q8NCU8 AC091564.4-201ENST00000533934 2194 ntBASIC3.14□□□□□ -1.91
LINC00116Q8NCU8 NEB-218ENST00000603639 25578 ntAPPRIS ALT2 TSL 5 BASIC3.13□□□□□ -1.91
LINC00116Q8NCU8 NEB-219ENST00000604864 25578 ntAPPRIS ALT2 TSL 5 BASIC3.13□□□□□ -1.91
LINC00116Q8NCU8 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
LINC00116Q8NCU8 OR2J3-203ENST00000641960 3342 ntAPPRIS P1 BASIC3.13□□□□□ -1.91
LINC00116Q8NCU8 AL356292.1-201ENST00000283110 373 ntBASIC3.13□□□□□ -1.91
LINC00116Q8NCU8 SNORD114-1-201ENST00000362705 72 ntBASIC3.13□□□□□ -1.91
LINC00116Q8NCU8 Y_RNA.521-201ENST00000384560 114 ntBASIC3.13□□□□□ -1.91
LINC00116Q8NCU8 RNU6-1211P-201ENST00000459179 105 ntBASIC3.13□□□□□ -1.91
LINC00116Q8NCU8 RPS26P55-201ENST00000471178 356 ntBASIC3.13□□□□□ -1.91
LINC00116Q8NCU8 PPP2R2B-IT1-201ENST00000505921 447 ntTSL 3 BASIC3.13□□□□□ -1.91
LINC00116Q8NCU8 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC3.13□□□□□ -1.91
LINC00116Q8NCU8 AP003357.1-201ENST00000604497 148 ntBASIC3.13□□□□□ -1.91
LINC00116Q8NCU8 AC002064.3-201ENST00000623448 346 ntBASIC3.13□□□□□ -1.91
LINC00116Q8NCU8 NDST3-201ENST00000296499 5961 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
LINC00116Q8NCU8 EPS15-202ENST00000371730 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC3.13□□□□□ -1.91
LINC00116Q8NCU8 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
LINC00116Q8NCU8 OR4K2-204ENST00000641885 8681 ntAPPRIS P1 BASIC3.13□□□□□ -1.91
LINC00116Q8NCU8 ZMYM2-203ENST00000382874 10139 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
LINC00116Q8NCU8 PIK3C2G-206ENST00000538779 4963 ntTSL 5 BASIC3.12□□□□□ -1.91
LINC00116Q8NCU8 VNN1-201ENST00000367928 3106 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
LINC00116Q8NCU8 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC3.12□□□□□ -1.91
LINC00116Q8NCU8 Y_RNA.261-201ENST00000364631 102 ntBASIC3.12□□□□□ -1.91
LINC00116Q8NCU8 SNORD31B-201ENST00000364977 69 ntBASIC3.12□□□□□ -1.91
LINC00116Q8NCU8 Y_RNA.420-201ENST00000384043 110 ntBASIC3.12□□□□□ -1.91
LINC00116Q8NCU8 RNA5SP210-201ENST00000391034 120 ntBASIC3.12□□□□□ -1.91
LINC00116Q8NCU8 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC3.12□□□□□ -1.91
LINC00116Q8NCU8 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
LINC00116Q8NCU8 RPL23AP54-201ENST00000495129 419 ntBASIC3.12□□□□□ -1.91
LINC00116Q8NCU8 RNA5SP20-201ENST00000515976 84 ntBASIC3.12□□□□□ -1.91
LINC00116Q8NCU8 AC007336.1-201ENST00000576365 3828 ntBASIC3.12□□□□□ -1.91
LINC00116Q8NCU8 AC005972.2-201ENST00000604690 348 ntBASIC3.12□□□□□ -1.91
LINC00116Q8NCU8 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC3.12□□□□□ -1.91
LINC00116Q8NCU8 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
LINC00116Q8NCU8 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC3.12□□□□□ -1.91
LINC00116Q8NCU8 TSLP-202ENST00000379706 2411 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
LINC00116Q8NCU8 ZNF702P-202ENST00000434269 1966 ntBASIC3.11□□□□□ -1.91
LINC00116Q8NCU8 CEP70-211ENST00000484888 1993 ntAPPRIS P3 TSL 5 BASIC3.11□□□□□ -1.91
LINC00116Q8NCU8 Y_RNA.81-201ENST00000362997 102 ntBASIC3.11□□□□□ -1.91
LINC00116Q8NCU8 RNU6-438P-201ENST00000365561 103 ntBASIC3.11□□□□□ -1.91
LINC00116Q8NCU8 RNU6-1323P-201ENST00000384025 107 ntBASIC3.11□□□□□ -1.91
LINC00116Q8NCU8 RNU6-418P-201ENST00000384035 107 ntBASIC3.11□□□□□ -1.91
LINC00116Q8NCU8 Y_RNA.542-201ENST00000384641 111 ntBASIC3.11□□□□□ -1.91
LINC00116Q8NCU8 RNU6-482P-201ENST00000391068 107 ntBASIC3.11□□□□□ -1.91
LINC00116Q8NCU8 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC3.11□□□□□ -1.91
LINC00116Q8NCU8 LINC02269-201ENST00000509968 511 ntTSL 3 BASIC3.11□□□□□ -1.91
LINC00116Q8NCU8 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC3.11□□□□□ -1.91
LINC00116Q8NCU8 RNU6-948P-201ENST00000516374 107 ntBASIC3.11□□□□□ -1.91
LINC00116Q8NCU8 RNU6-63P-201ENST00000516690 95 ntBASIC3.11□□□□□ -1.91
LINC00116Q8NCU8 SNORD59.2-201ENST00000516873 68 ntBASIC3.11□□□□□ -1.91
LINC00116Q8NCU8 AC127455.1-201ENST00000565496 145 ntBASIC3.11□□□□□ -1.91
LINC00116Q8NCU8 MIR6844-201ENST00000637122 62 ntBASIC3.11□□□□□ -1.91
LINC00116Q8NCU8 RNU1-72P-201ENST00000362976 153 ntBASIC3.1□□□□□ -1.91
LINC00116Q8NCU8 RNA5SP456-201ENST00000364002 114 ntBASIC3.1□□□□□ -1.91
LINC00116Q8NCU8 MIR218-1-201ENST00000384999 110 ntBASIC3.1□□□□□ -1.91
LINC00116Q8NCU8 MIR181B1-201ENST00000385240 110 ntBASIC3.1□□□□□ -1.91
LINC00116Q8NCU8 5S_rRNA.2-201ENST00000391293 112 ntBASIC3.1□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 104 ms