Protein–RNA interactions for Protein: Q7Z3D4

LYSMD3, LysM and putative peptidoglycan-binding domain-containing protein 3, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3Q7Z3D4 RNU6-228P-201ENST00000362700 106 ntBASIC3.59□□□□□ -1.83
LYSMD3Q7Z3D4 RNU6-283P-201ENST00000364788 107 ntBASIC3.59□□□□□ -1.83
LYSMD3Q7Z3D4 SNORA2.2-201ENST00000365473 135 ntBASIC3.59□□□□□ -1.83
LYSMD3Q7Z3D4 RNU6-1104P-201ENST00000384723 104 ntBASIC3.59□□□□□ -1.83
LYSMD3Q7Z3D4 RNA5SP225-201ENST00000410874 135 ntBASIC3.59□□□□□ -1.83
LYSMD3Q7Z3D4 AP001486.1-201ENST00000463339 476 ntBASIC3.59□□□□□ -1.83
LYSMD3Q7Z3D4 AC110768.1-201ENST00000509222 400 ntBASIC3.59□□□□□ -1.83
LYSMD3Q7Z3D4 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC3.59□□□□□ -1.83
LYSMD3Q7Z3D4 SNORA70.14-201ENST00000516205 110 ntBASIC3.59□□□□□ -1.83
LYSMD3Q7Z3D4 RNU6-1291P-201ENST00000516591 104 ntBASIC3.59□□□□□ -1.83
LYSMD3Q7Z3D4 LINC00508-201ENST00000538901 194 ntTSL 5 BASIC3.59□□□□□ -1.83
LYSMD3Q7Z3D4 AC022217.4-201ENST00000604389 163 ntBASIC3.59□□□□□ -1.83
LYSMD3Q7Z3D4 AC007179.3-201ENST00000604976 235 ntBASIC3.59□□□□□ -1.83
LYSMD3Q7Z3D4 AC012531.5-201ENST00000611375 151 ntBASIC3.59□□□□□ -1.83
LYSMD3Q7Z3D4 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC3.59□□□□□ -1.83
LYSMD3Q7Z3D4 AL162726.3-218ENST00000636401 95 ntBASIC3.59□□□□□ -1.83
LYSMD3Q7Z3D4 ERMN-205ENST00000410096 3793 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.84
LYSMD3Q7Z3D4 SAMD3-214ENST00000532763 3690 ntTSL 5 BASIC3.58□□□□□ -1.84
LYSMD3Q7Z3D4 DDIAS-201ENST00000329143 3367 ntAPPRIS P2 TSL 1 (best) BASIC3.58□□□□□ -1.84
LYSMD3Q7Z3D4 AC025164.2-202ENST00000499685 5699 ntTSL 3 BASIC3.58□□□□□ -1.84
LYSMD3Q7Z3D4 CYYR1-AS1-201ENST00000357401 3412 ntTSL 2 BASIC3.58□□□□□ -1.84
LYSMD3Q7Z3D4 FNDC3A-202ENST00000398316 5714 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
LYSMD3Q7Z3D4 AC002546.1-201ENST00000588041 2504 ntBASIC3.58□□□□□ -1.84
LYSMD3Q7Z3D4 RNU1-72P-201ENST00000362976 153 ntBASIC3.58□□□□□ -1.84
LYSMD3Q7Z3D4 RNU1-96P-201ENST00000364163 162 ntBASIC3.58□□□□□ -1.84
LYSMD3Q7Z3D4 RNA5SP42-201ENST00000364278 115 ntBASIC3.58□□□□□ -1.84
LYSMD3Q7Z3D4 Y_RNA.242-201ENST00000364473 110 ntBASIC3.58□□□□□ -1.84
LYSMD3Q7Z3D4 Y_RNA.466-201ENST00000384294 113 ntBASIC3.58□□□□□ -1.84
LYSMD3Q7Z3D4 RNU6-1186P-201ENST00000410429 97 ntBASIC3.58□□□□□ -1.84
LYSMD3Q7Z3D4 AL445687.1-201ENST00000439946 251 ntBASIC3.58□□□□□ -1.84
LYSMD3Q7Z3D4 RNA5SP490-201ENST00000517141 136 ntBASIC3.58□□□□□ -1.84
LYSMD3Q7Z3D4 AC027045.1-201ENST00000609065 202 ntTSL 5 BASIC3.58□□□□□ -1.84
LYSMD3Q7Z3D4 ABCA5-208ENST00000588877 6525 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
LYSMD3Q7Z3D4 SLC39A10-202ENST00000409086 5432 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
LYSMD3Q7Z3D4 ADAMTS9-AS1-207ENST00000594810 3609 ntTSL 4 BASIC3.58□□□□□ -1.84
LYSMD3Q7Z3D4 CEP170P1-201ENST00000502249 4587 ntBASIC3.58□□□□□ -1.84
LYSMD3Q7Z3D4 AGL-206ENST00000370165 7106 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
LYSMD3Q7Z3D4 CNOT6L-201ENST00000504123 8843 ntAPPRIS P1 TSL 2 BASIC3.57□□□□□ -1.84
LYSMD3Q7Z3D4 Y_RNA.17-201ENST00000362433 111 ntBASIC3.57□□□□□ -1.84
LYSMD3Q7Z3D4 Y_RNA.410-201ENST00000383992 113 ntBASIC3.57□□□□□ -1.84
LYSMD3Q7Z3D4 RNU6-1124P-201ENST00000384169 107 ntBASIC3.57□□□□□ -1.84
LYSMD3Q7Z3D4 MIR767-201ENST00000390228 109 ntBASIC3.57□□□□□ -1.84
LYSMD3Q7Z3D4 TRAV39-201ENST00000390466 331 ntAPPRIS P1 BASIC3.57□□□□□ -1.84
LYSMD3Q7Z3D4 U8.17-201ENST00000391292 132 ntBASIC3.57□□□□□ -1.84
LYSMD3Q7Z3D4 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC3.57□□□□□ -1.84
LYSMD3Q7Z3D4 ATP6V0E1P1-201ENST00000412537 226 ntBASIC3.57□□□□□ -1.84
LYSMD3Q7Z3D4 RPL39P25-201ENST00000449384 154 ntBASIC3.57□□□□□ -1.84
LYSMD3Q7Z3D4 RNU7-164P-201ENST00000459221 62 ntBASIC3.57□□□□□ -1.84
LYSMD3Q7Z3D4 RNU6-579P-201ENST00000516879 102 ntBASIC3.57□□□□□ -1.84
LYSMD3Q7Z3D4 NDUFB9P3-201ENST00000521269 501 ntBASIC3.57□□□□□ -1.84
LYSMD3Q7Z3D4 AC124657.1-201ENST00000527819 429 ntTSL 3 BASIC3.57□□□□□ -1.84
LYSMD3Q7Z3D4 AC022523.2-201ENST00000561045 150 ntBASIC3.57□□□□□ -1.84
LYSMD3Q7Z3D4 ZNF720P1-201ENST00000562403 1939 ntBASIC3.57□□□□□ -1.84
LYSMD3Q7Z3D4 U4.6-201ENST00000621618 127 ntBASIC3.57□□□□□ -1.84
LYSMD3Q7Z3D4 SYT14-208ENST00000637265 13567 ntTSL 5 BASIC3.57□□□□□ -1.84
LYSMD3Q7Z3D4 RXFP1-205ENST00000448688 3861 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
LYSMD3Q7Z3D4 NEB-204ENST00000409198 20637 ntAPPRIS P3 TSL 5 BASIC3.57□□□□□ -1.84
LYSMD3Q7Z3D4 ZNF271P-202ENST00000465539 1970 ntBASIC3.56□□□□□ -1.84
LYSMD3Q7Z3D4 FIGNL1-202ENST00000395556 3485 ntAPPRIS P1 TSL 2 BASIC3.56□□□□□ -1.84
LYSMD3Q7Z3D4 MIR218-2-201ENST00000385006 110 ntBASIC3.56□□□□□ -1.84
LYSMD3Q7Z3D4 AC006989.1-201ENST00000427212 131 ntBASIC3.56□□□□□ -1.84
LYSMD3Q7Z3D4 HMGN2P7-201ENST00000456186 273 ntBASIC3.56□□□□□ -1.84
LYSMD3Q7Z3D4 CFAP44-AS1-201ENST00000473329 396 ntTSL 2 BASIC3.56□□□□□ -1.84
LYSMD3Q7Z3D4 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC3.56□□□□□ -1.84
LYSMD3Q7Z3D4 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC3.56□□□□□ -1.84
LYSMD3Q7Z3D4 RNU7-123P-201ENST00000515911 60 ntBASIC3.56□□□□□ -1.84
LYSMD3Q7Z3D4 DEFB131E-201ENST00000532329 154 ntBASIC3.56□□□□□ -1.84
LYSMD3Q7Z3D4 AP001458.1-201ENST00000532626 92 ntTSL 3 BASIC3.56□□□□□ -1.84
LYSMD3Q7Z3D4 AC087685.1-201ENST00000587507 141 ntBASIC3.56□□□□□ -1.84
LYSMD3Q7Z3D4 PTPN22-207ENST00000528414 3424 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
LYSMD3Q7Z3D4 IDE-202ENST00000371581 4480 ntTSL 2 BASIC3.56□□□□□ -1.84
LYSMD3Q7Z3D4 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC3.56□□□□□ -1.84
LYSMD3Q7Z3D4 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC3.56□□□□□ -1.84
LYSMD3Q7Z3D4 DMXL1-201ENST00000311085 11072 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
LYSMD3Q7Z3D4 FAM214A-216ENST00000619572 3548 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
LYSMD3Q7Z3D4 PTPN22-211ENST00000538253 3575 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
LYSMD3Q7Z3D4 C6orf10-204ENST00000447241 2148 ntAPPRIS P3 TSL 5 BASIC3.55□□□□□ -1.84
LYSMD3Q7Z3D4 SLC27A2-203ENST00000544960 2025 ntTSL 2 BASIC3.55□□□□□ -1.84
LYSMD3Q7Z3D4 MIR126-201ENST00000362291 85 ntBASIC3.55□□□□□ -1.84
LYSMD3Q7Z3D4 RNY3P2-201ENST00000362918 102 ntBASIC3.55□□□□□ -1.84
LYSMD3Q7Z3D4 RNU6-525P-201ENST00000363685 104 ntBASIC3.55□□□□□ -1.84
LYSMD3Q7Z3D4 RNU6-1189P-201ENST00000383958 107 ntBASIC3.55□□□□□ -1.84
LYSMD3Q7Z3D4 RNY1P6-201ENST00000384193 109 ntBASIC3.55□□□□□ -1.84
LYSMD3Q7Z3D4 MIR183-201ENST00000384958 110 ntBASIC3.55□□□□□ -1.84
LYSMD3Q7Z3D4 MIR548O-201ENST00000408583 114 ntBASIC3.55□□□□□ -1.84
LYSMD3Q7Z3D4 CYCSP4-201ENST00000429682 331 ntBASIC3.55□□□□□ -1.84
LYSMD3Q7Z3D4 HMGN2P34-201ENST00000437647 269 ntBASIC3.55□□□□□ -1.84
LYSMD3Q7Z3D4 RN7SL293P-201ENST00000481765 281 ntBASIC3.55□□□□□ -1.84
LYSMD3Q7Z3D4 SNORA4.4-201ENST00000515921 135 ntBASIC3.55□□□□□ -1.84
LYSMD3Q7Z3D4 SCARNA23-201ENST00000516060 130 ntBASIC3.55□□□□□ -1.84
LYSMD3Q7Z3D4 MIR3163-201ENST00000581592 73 ntBASIC3.55□□□□□ -1.84
LYSMD3Q7Z3D4 MIR3922-201ENST00000585192 84 ntBASIC3.55□□□□□ -1.84
LYSMD3Q7Z3D4 AL161756.2-201ENST00000604597 246 ntBASIC3.55□□□□□ -1.84
LYSMD3Q7Z3D4 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC3.55□□□□□ -1.84
LYSMD3Q7Z3D4 AP003355.3-201ENST00000623465 114 ntBASIC3.55□□□□□ -1.84
LYSMD3Q7Z3D4 NUDT12-201ENST00000230792 3492 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
LYSMD3Q7Z3D4 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC3.55□□□□□ -1.84
LYSMD3Q7Z3D4 KCNJ16-203ENST00000392671 3981 ntAPPRIS P1 TSL 2 BASIC3.54□□□□□ -1.84
LYSMD3Q7Z3D4 CCSER2-201ENST00000224756 7664 ntAPPRIS P1 TSL 5 BASIC3.54□□□□□ -1.84
LYSMD3Q7Z3D4 OTUD4P1-201ENST00000237841 3067 ntBASIC3.54□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 112.6 ms