Protein–RNA interactions for Protein: Q6ZMZ3

SYNE3, Nesprin-3, humanhuman

Predictions only

Length 975 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3Q6ZMZ3 AL360085.1-201ENST00000604713 532 ntBASIC2.11□□□□□ -2.07
SYNE3Q6ZMZ3 U6.73-201ENST00000619194 103 ntBASIC2.11□□□□□ -2.07
SYNE3Q6ZMZ3 GS1-279B7.1-204ENST00000641809 378 ntBASIC2.11□□□□□ -2.07
SYNE3Q6ZMZ3 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC2.11□□□□□ -2.07
SYNE3Q6ZMZ3 Y_RNA.105-201ENST00000363182 111 ntBASIC2.1□□□□□ -2.07
SYNE3Q6ZMZ3 Y_RNA.222-201ENST00000364264 102 ntBASIC2.1□□□□□ -2.07
SYNE3Q6ZMZ3 RNU6-937P-201ENST00000384325 106 ntBASIC2.1□□□□□ -2.07
SYNE3Q6ZMZ3 MIR504-201ENST00000385065 83 ntBASIC2.1□□□□□ -2.07
SYNE3Q6ZMZ3 U8.13-201ENST00000390842 128 ntBASIC2.1□□□□□ -2.07
SYNE3Q6ZMZ3 MIR873-201ENST00000401120 77 ntBASIC2.1□□□□□ -2.07
SYNE3Q6ZMZ3 MIR1289-2-201ENST00000408360 111 ntBASIC2.1□□□□□ -2.07
SYNE3Q6ZMZ3 RNU6-121P-201ENST00000410525 99 ntBASIC2.1□□□□□ -2.07
SYNE3Q6ZMZ3 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC2.1□□□□□ -2.07
SYNE3Q6ZMZ3 RPL23AP3-201ENST00000453844 468 ntBASIC2.1□□□□□ -2.07
SYNE3Q6ZMZ3 RNVU1-2-201ENST00000516326 135 ntBASIC2.1□□□□□ -2.07
SYNE3Q6ZMZ3 RNU6-1046P-201ENST00000516538 107 ntBASIC2.1□□□□□ -2.07
SYNE3Q6ZMZ3 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC2.1□□□□□ -2.07
SYNE3Q6ZMZ3 AC024995.1-201ENST00000523014 93 ntBASIC2.1□□□□□ -2.07
SYNE3Q6ZMZ3 PRR13P7-201ENST00000605538 430 ntBASIC2.1□□□□□ -2.07
SYNE3Q6ZMZ3 U1.36-201ENST00000620684 176 ntBASIC2.1□□□□□ -2.07
SYNE3Q6ZMZ3 U6.108-201ENST00000637764 58 ntBASIC2.1□□□□□ -2.07
SYNE3Q6ZMZ3 RNU6-862P-201ENST00000362804 105 ntBASIC2.09□□□□□ -2.07
SYNE3Q6ZMZ3 Y_RNA.143-201ENST00000363520 106 ntBASIC2.09□□□□□ -2.07
SYNE3Q6ZMZ3 RNU6-271P-201ENST00000363858 105 ntBASIC2.09□□□□□ -2.07
SYNE3Q6ZMZ3 SNORA72.2-201ENST00000365028 127 ntBASIC2.09□□□□□ -2.07
SYNE3Q6ZMZ3 Y_RNA.581-201ENST00000391017 97 ntBASIC2.09□□□□□ -2.07
SYNE3Q6ZMZ3 AL158823.1-201ENST00000418441 478 ntBASIC2.09□□□□□ -2.07
SYNE3Q6ZMZ3 RPL31P63-201ENST00000422565 375 ntBASIC2.09□□□□□ -2.07
SYNE3Q6ZMZ3 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC2.09□□□□□ -2.07
SYNE3Q6ZMZ3 AC245047.4-201ENST00000433189 144 ntBASIC2.09□□□□□ -2.07
SYNE3Q6ZMZ3 MRPS10P1-201ENST00000448483 130 ntBASIC2.09□□□□□ -2.07
SYNE3Q6ZMZ3 RPL23AP42-201ENST00000471152 471 ntBASIC2.09□□□□□ -2.07
SYNE3Q6ZMZ3 MRPS35P2-201ENST00000508242 191 ntBASIC2.09□□□□□ -2.07
SYNE3Q6ZMZ3 RNU6-1143P-201ENST00000516125 104 ntBASIC2.09□□□□□ -2.07
SYNE3Q6ZMZ3 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC2.09□□□□□ -2.07
SYNE3Q6ZMZ3 AL117187.1-201ENST00000555482 181 ntBASIC2.09□□□□□ -2.07
SYNE3Q6ZMZ3 AL137100.2-201ENST00000555786 315 ntBASIC2.09□□□□□ -2.07
SYNE3Q6ZMZ3 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC2.09□□□□□ -2.07
SYNE3Q6ZMZ3 MIR3618-201ENST00000580330 88 ntBASIC2.09□□□□□ -2.07
SYNE3Q6ZMZ3 AC090398.1-202ENST00000580403 457 ntTSL 2 BASIC2.09□□□□□ -2.07
SYNE3Q6ZMZ3 AC069114.2-201ENST00000604699 304 ntBASIC2.09□□□□□ -2.07
SYNE3Q6ZMZ3 MIR376A1-201ENST00000616574 68 ntBASIC2.09□□□□□ -2.07
SYNE3Q6ZMZ3 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC2.09□□□□□ -2.07
SYNE3Q6ZMZ3 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC2.09□□□□□ -2.07
SYNE3Q6ZMZ3 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC2.09□□□□□ -2.07
SYNE3Q6ZMZ3 AL356292.1-201ENST00000283110 373 ntBASIC2.08□□□□□ -2.08
SYNE3Q6ZMZ3 RNU6-770P-201ENST00000363929 105 ntBASIC2.08□□□□□ -2.08
SYNE3Q6ZMZ3 Y_RNA.210-201ENST00000364161 110 ntBASIC2.08□□□□□ -2.08
SYNE3Q6ZMZ3 RNU2-61P-201ENST00000411069 191 ntBASIC2.08□□□□□ -2.08
SYNE3Q6ZMZ3 AC009310.1-201ENST00000414414 451 ntBASIC2.08□□□□□ -2.08
SYNE3Q6ZMZ3 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC2.08□□□□□ -2.08
SYNE3Q6ZMZ3 AL731563.1-201ENST00000442202 214 ntBASIC2.08□□□□□ -2.08
SYNE3Q6ZMZ3 RPL23AP63-201ENST00000498752 471 ntBASIC2.08□□□□□ -2.08
SYNE3Q6ZMZ3 RNU6-397P-201ENST00000516226 104 ntBASIC2.08□□□□□ -2.08
SYNE3Q6ZMZ3 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC2.08□□□□□ -2.08
SYNE3Q6ZMZ3 AP005660.1-201ENST00000522972 293 ntBASIC2.08□□□□□ -2.08
SYNE3Q6ZMZ3 AC006380.1-201ENST00000603598 186 ntBASIC2.08□□□□□ -2.08
SYNE3Q6ZMZ3 AC136443.5-201ENST00000603741 370 ntBASIC2.08□□□□□ -2.08
SYNE3Q6ZMZ3 SNORD113-5-201ENST00000607261 78 ntBASIC2.08□□□□□ -2.08
SYNE3Q6ZMZ3 AC011373.1-201ENST00000607270 237 ntBASIC2.08□□□□□ -2.08
SYNE3Q6ZMZ3 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC2.07□□□□□ -2.08
SYNE3Q6ZMZ3 SNORD81.1-201ENST00000363064 77 ntBASIC2.07□□□□□ -2.08
SYNE3Q6ZMZ3 SNORA33-201ENST00000363664 130 ntBASIC2.07□□□□□ -2.08
SYNE3Q6ZMZ3 RNU6-117P-201ENST00000365415 107 ntBASIC2.07□□□□□ -2.08
SYNE3Q6ZMZ3 SNORA8-201ENST00000384574 139 ntBASIC2.07□□□□□ -2.08
SYNE3Q6ZMZ3 MIR9-3-201ENST00000385084 90 ntBASIC2.07□□□□□ -2.08
SYNE3Q6ZMZ3 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC2.07□□□□□ -2.08
SYNE3Q6ZMZ3 RNU6-1109P-201ENST00000391187 107 ntBASIC2.07□□□□□ -2.08
SYNE3Q6ZMZ3 AL031003.1-201ENST00000404229 172 ntBASIC2.07□□□□□ -2.08
SYNE3Q6ZMZ3 MIR1253-201ENST00000408273 105 ntBASIC2.07□□□□□ -2.08
SYNE3Q6ZMZ3 RPL23AP36-201ENST00000413895 458 ntBASIC2.07□□□□□ -2.08
SYNE3Q6ZMZ3 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC2.07□□□□□ -2.08
SYNE3Q6ZMZ3 AL358176.2-201ENST00000425769 204 ntBASIC2.07□□□□□ -2.08
SYNE3Q6ZMZ3 LINC01399-202ENST00000458450 244 ntBASIC2.07□□□□□ -2.08
SYNE3Q6ZMZ3 RPS26P55-201ENST00000471178 356 ntBASIC2.07□□□□□ -2.08
SYNE3Q6ZMZ3 RNU6-496P-201ENST00000516145 99 ntBASIC2.07□□□□□ -2.08
SYNE3Q6ZMZ3 RNU6-436P-201ENST00000516171 114 ntBASIC2.07□□□□□ -2.08
SYNE3Q6ZMZ3 RNU6-295P-201ENST00000516901 104 ntBASIC2.07□□□□□ -2.08
SYNE3Q6ZMZ3 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC2.07□□□□□ -2.08
SYNE3Q6ZMZ3 AC022254.1-201ENST00000567857 235 ntBASIC2.07□□□□□ -2.08
SYNE3Q6ZMZ3 AC010900.2-201ENST00000604508 210 ntBASIC2.07□□□□□ -2.08
SYNE3Q6ZMZ3 MIR7843-201ENST00000622274 79 ntBASIC2.07□□□□□ -2.08
SYNE3Q6ZMZ3 AC084768.2-201ENST00000622736 221 ntBASIC2.07□□□□□ -2.08
SYNE3Q6ZMZ3 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC2.07□□□□□ -2.08
SYNE3Q6ZMZ3 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC2.07□□□□□ -2.08
SYNE3Q6ZMZ3 RNU1-22P-201ENST00000363334 158 ntBASIC2.06□□□□□ -2.08
SYNE3Q6ZMZ3 SNORA63D-201ENST00000364359 132 ntBASIC2.06□□□□□ -2.08
SYNE3Q6ZMZ3 RNU6-1019P-201ENST00000364424 107 ntBASIC2.06□□□□□ -2.08
SYNE3Q6ZMZ3 Y_RNA.518-201ENST00000384552 113 ntBASIC2.06□□□□□ -2.08
SYNE3Q6ZMZ3 RNU6-417P-201ENST00000384712 107 ntBASIC2.06□□□□□ -2.08
SYNE3Q6ZMZ3 RNA5SP100-201ENST00000410903 110 ntBASIC2.06□□□□□ -2.08
SYNE3Q6ZMZ3 RNA5SP59-201ENST00000410922 110 ntBASIC2.06□□□□□ -2.08
SYNE3Q6ZMZ3 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC2.06□□□□□ -2.08
SYNE3Q6ZMZ3 HSPE1P13-201ENST00000451143 297 ntBASIC2.06□□□□□ -2.08
SYNE3Q6ZMZ3 HSPE1P25-201ENST00000455484 251 ntBASIC2.06□□□□□ -2.08
SYNE3Q6ZMZ3 RPS29P11-201ENST00000496507 171 ntBASIC2.06□□□□□ -2.08
SYNE3Q6ZMZ3 SEPT14P8-201ENST00000508026 178 ntBASIC2.06□□□□□ -2.08
SYNE3Q6ZMZ3 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC2.06□□□□□ -2.08
SYNE3Q6ZMZ3 RNU6-155P-201ENST00000516347 100 ntBASIC2.06□□□□□ -2.08
SYNE3Q6ZMZ3 SNORA40.15-201ENST00000516884 107 ntBASIC2.06□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 113.7 ms