Protein–RNA interactions for Protein: Q5VTL8

PRPF38B, Pre-mRNA-splicing factor 38B, humanhuman

Known RBP Predictions only

Length 546 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38BQ5VTL8 AC007229.1-201ENST00000590455 412 ntBASIC3.97□□□□□ -1.77
PRPF38BQ5VTL8 AC107294.3-201ENST00000609211 526 ntBASIC3.97□□□□□ -1.77
PRPF38BQ5VTL8 TLR8-202ENST00000311912 3367 ntAPPRIS P4 TSL 1 (best) BASIC3.97□□□□□ -1.77
PRPF38BQ5VTL8 STON1-GTF2A1L-202ENST00000394754 3824 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
PRPF38BQ5VTL8 RAPH1-203ENST00000374493 3909 ntAPPRIS ALT2 TSL 5 BASIC3.97□□□□□ -1.77
PRPF38BQ5VTL8 IFT80-220ENST00000483465 4044 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
PRPF38BQ5VTL8 PTPN22-211ENST00000538253 3575 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
PRPF38BQ5VTL8 SCN3A-201ENST00000283254 9091 ntAPPRIS P3 TSL 1 (best) BASIC3.96□□□□□ -1.77
PRPF38BQ5VTL8 ADGRG2-205ENST00000357991 4661 ntAPPRIS P3 TSL 1 (best) BASIC3.96□□□□□ -1.78
PRPF38BQ5VTL8 RNA5SP125-201ENST00000364843 120 ntBASIC3.96□□□□□ -1.78
PRPF38BQ5VTL8 RNA5SP173-201ENST00000364857 136 ntBASIC3.96□□□□□ -1.78
PRPF38BQ5VTL8 CD24P4-201ENST00000382840 243 ntBASIC3.96□□□□□ -1.78
PRPF38BQ5VTL8 SNORD61-201ENST00000384252 73 ntBASIC3.96□□□□□ -1.78
PRPF38BQ5VTL8 AC002075.2-201ENST00000425207 252 ntBASIC3.96□□□□□ -1.78
PRPF38BQ5VTL8 AC069285.2-201ENST00000440210 275 ntBASIC3.96□□□□□ -1.78
PRPF38BQ5VTL8 AC025445.1-201ENST00000502728 300 ntBASIC3.96□□□□□ -1.78
PRPF38BQ5VTL8 NEDD4-201ENST00000338963 7019 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
PRPF38BQ5VTL8 DTWD1-201ENST00000251250 13776 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
PRPF38BQ5VTL8 FNDC3A-202ENST00000398316 5714 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
PRPF38BQ5VTL8 RANBP2-201ENST00000283195 11711 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
PRPF38BQ5VTL8 USH2A-201ENST00000307340 18883 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
PRPF38BQ5VTL8 FNBP1L-203ENST00000370253 3889 ntAPPRIS ALT1 TSL 5 BASIC3.95□□□□□ -1.78
PRPF38BQ5VTL8 RNU1-23P-201ENST00000363361 144 ntBASIC3.95□□□□□ -1.78
PRPF38BQ5VTL8 Y_RNA.253-201ENST00000364562 112 ntBASIC3.95□□□□□ -1.78
PRPF38BQ5VTL8 Y_RNA.267-201ENST00000364679 109 ntBASIC3.95□□□□□ -1.78
PRPF38BQ5VTL8 Y_RNA.332-201ENST00000365271 113 ntBASIC3.95□□□□□ -1.78
PRPF38BQ5VTL8 MIR488-201ENST00000365739 83 ntBASIC3.95□□□□□ -1.78
PRPF38BQ5VTL8 RNU6-1292P-201ENST00000383856 107 ntBASIC3.95□□□□□ -1.78
PRPF38BQ5VTL8 MIR93-201ENST00000385024 80 ntBASIC3.95□□□□□ -1.78
PRPF38BQ5VTL8 AC010469.1-201ENST00000463864 576 ntBASIC3.95□□□□□ -1.78
PRPF38BQ5VTL8 RNU6-693P-201ENST00000516134 107 ntBASIC3.95□□□□□ -1.78
PRPF38BQ5VTL8 RNU1-41P-201ENST00000516161 162 ntBASIC3.95□□□□□ -1.78
PRPF38BQ5VTL8 RNU7-99P-201ENST00000516271 62 ntBASIC3.95□□□□□ -1.78
PRPF38BQ5VTL8 RNU1-48P-201ENST00000516400 162 ntBASIC3.95□□□□□ -1.78
PRPF38BQ5VTL8 SNORA70.18-201ENST00000516696 98 ntBASIC3.95□□□□□ -1.78
PRPF38BQ5VTL8 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC3.95□□□□□ -1.78
PRPF38BQ5VTL8 AC008056.1-201ENST00000553322 394 ntTSL 3 BASIC3.95□□□□□ -1.78
PRPF38BQ5VTL8 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC3.95□□□□□ -1.78
PRPF38BQ5VTL8 C6orf10-204ENST00000447241 2148 ntAPPRIS P3 TSL 5 BASIC3.95□□□□□ -1.78
PRPF38BQ5VTL8 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
PRPF38BQ5VTL8 RBBP8-202ENST00000360790 2962 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
PRPF38BQ5VTL8 C2orf16-202ENST00000447166 16401 ntAPPRIS ALT2 TSL 3 BASIC3.95□□□□□ -1.78
PRPF38BQ5VTL8 NCOA1-203ENST00000395856 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC3.94□□□□□ -1.78
PRPF38BQ5VTL8 EVI5-208ENST00000540033 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.94□□□□□ -1.78
PRPF38BQ5VTL8 DNAH8-202ENST00000359357 13864 ntAPPRIS ALT2 TSL 2 BASIC3.94□□□□□ -1.78
PRPF38BQ5VTL8 FKTN-209ENST00000602661 2576 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
PRPF38BQ5VTL8 FIGNL1-201ENST00000356889 3471 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
PRPF38BQ5VTL8 MIR513A2-201ENST00000385249 127 ntBASIC3.94□□□□□ -1.78
PRPF38BQ5VTL8 MIR802-201ENST00000390235 94 ntBASIC3.94□□□□□ -1.78
PRPF38BQ5VTL8 RNU4-47P-201ENST00000410876 114 ntBASIC3.94□□□□□ -1.78
PRPF38BQ5VTL8 CALM2P4-201ENST00000430810 426 ntBASIC3.94□□□□□ -1.78
PRPF38BQ5VTL8 AC011406.1-201ENST00000512440 370 ntBASIC3.94□□□□□ -1.78
PRPF38BQ5VTL8 Y_RNA.666-201ENST00000516187 112 ntBASIC3.94□□□□□ -1.78
PRPF38BQ5VTL8 SNORA40.13-201ENST00000516379 120 ntBASIC3.94□□□□□ -1.78
PRPF38BQ5VTL8 Y_RNA.714-201ENST00000517065 90 ntBASIC3.94□□□□□ -1.78
PRPF38BQ5VTL8 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC3.94□□□□□ -1.78
PRPF38BQ5VTL8 5S_rRNA.12-201ENST00000617631 107 ntBASIC3.94□□□□□ -1.78
PRPF38BQ5VTL8 MIR1245B-201ENST00000636115 69 ntBASIC3.94□□□□□ -1.78
PRPF38BQ5VTL8 TET2-204ENST00000413648 4973 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
PRPF38BQ5VTL8 UBA6-201ENST00000322244 9564 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
PRPF38BQ5VTL8 GABRG2-229ENST00000641017 3628 ntBASIC3.94□□□□□ -1.78
PRPF38BQ5VTL8 PIGN-229ENST00000638936 4233 ntAPPRIS P1 TSL 5 BASIC3.94□□□□□ -1.78
PRPF38BQ5VTL8 DMXL2-202ENST00000449909 7465 ntAPPRIS ALT2 TSL 1 (best) BASIC3.94□□□□□ -1.78
PRPF38BQ5VTL8 WDFY3-AS2-202ENST00000451762 5814 ntTSL 3 BASIC3.93□□□□□ -1.78
PRPF38BQ5VTL8 PPP1R9A-208ENST00000456331 10090 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
PRPF38BQ5VTL8 ABCA5-208ENST00000588877 6525 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
PRPF38BQ5VTL8 snoU2-30.2-201ENST00000362805 70 ntBASIC3.93□□□□□ -1.78
PRPF38BQ5VTL8 RNU1-96P-201ENST00000364163 162 ntBASIC3.93□□□□□ -1.78
PRPF38BQ5VTL8 MIR570-201ENST00000384917 97 ntBASIC3.93□□□□□ -1.78
PRPF38BQ5VTL8 MIR1302-5-201ENST00000408164 150 ntBASIC3.93□□□□□ -1.78
PRPF38BQ5VTL8 SEM1P1-201ENST00000506694 209 ntBASIC3.93□□□□□ -1.78
PRPF38BQ5VTL8 RNU6-1149P-201ENST00000516810 97 ntBASIC3.93□□□□□ -1.78
PRPF38BQ5VTL8 RNU6-1231P-201ENST00000517185 103 ntBASIC3.93□□□□□ -1.78
PRPF38BQ5VTL8 LINC02164-201ENST00000566684 272 ntTSL 3 BASIC3.93□□□□□ -1.78
PRPF38BQ5VTL8 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC3.93□□□□□ -1.78
PRPF38BQ5VTL8 MIR7702-201ENST00000621931 59 ntBASIC3.93□□□□□ -1.78
PRPF38BQ5VTL8 AGL-206ENST00000370165 7106 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
PRPF38BQ5VTL8 MGAT4A-204ENST00000414521 3709 ntTSL 2 BASIC3.93□□□□□ -1.78
PRPF38BQ5VTL8 KIAA0825-203ENST00000513200 4942 ntTSL 5 BASIC3.93□□□□□ -1.78
PRPF38BQ5VTL8 MBD5-212ENST00000627651 5610 ntTSL 5 BASIC3.92□□□□□ -1.78
PRPF38BQ5VTL8 ERBIN-203ENST00000380938 4701 ntTSL 2 BASIC3.92□□□□□ -1.78
PRPF38BQ5VTL8 CCDC14-217ENST00000485727 7917 ntAPPRIS ALT2 TSL 1 (best) BASIC3.92□□□□□ -1.78
PRPF38BQ5VTL8 Z83843.1-201ENST00000604070 3685 ntBASIC3.92□□□□□ -1.78
PRPF38BQ5VTL8 RNU6-888P-201ENST00000363010 101 ntBASIC3.92□□□□□ -1.78
PRPF38BQ5VTL8 Y_RNA.242-201ENST00000364473 110 ntBASIC3.92□□□□□ -1.78
PRPF38BQ5VTL8 RNA5SP136-201ENST00000410906 107 ntBASIC3.92□□□□□ -1.78
PRPF38BQ5VTL8 RNA5SP306-201ENST00000411087 107 ntBASIC3.92□□□□□ -1.78
PRPF38BQ5VTL8 EDDM3CP-201ENST00000415977 425 ntBASIC3.92□□□□□ -1.78
PRPF38BQ5VTL8 AC004552.1-201ENST00000419089 348 ntBASIC3.92□□□□□ -1.78
PRPF38BQ5VTL8 RPS26P3-201ENST00000470205 348 ntBASIC3.92□□□□□ -1.78
PRPF38BQ5VTL8 AC090543.2-201ENST00000483963 348 ntBASIC3.92□□□□□ -1.78
PRPF38BQ5VTL8 AC004057.1-201ENST00000485827 348 ntBASIC3.92□□□□□ -1.78
PRPF38BQ5VTL8 RNA5SP236-201ENST00000516169 116 ntBASIC3.92□□□□□ -1.78
PRPF38BQ5VTL8 AC008507.4-201ENST00000585464 127 ntBASIC3.92□□□□□ -1.78
PRPF38BQ5VTL8 SNORA62.6-201ENST00000606322 83 ntBASIC3.92□□□□□ -1.78
PRPF38BQ5VTL8 AL359075.3-201ENST00000613288 217 ntBASIC3.92□□□□□ -1.78
PRPF38BQ5VTL8 PLPPR4-201ENST00000370184 4505 ntTSL 5 BASIC3.91□□□□□ -1.78
PRPF38BQ5VTL8 FIGNL1-203ENST00000419119 3700 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
PRPF38BQ5VTL8 CCDC141-202ENST00000409284 6960 ntAPPRIS P2 TSL 1 (best) BASIC3.91□□□□□ -1.78
PRPF38BQ5VTL8 AC018630.2-201ENST00000534866 2403 ntBASIC3.91□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 108.1 ms