Protein–RNA interactions for Protein: Q5TC82

RC3H1, Roquin-1, humanhuman

Known RBP Predictions only

Length 1,133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1Q5TC82 KIAA1524-206ENST00000491772 3877 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
RC3H1Q5TC82 PPIP5K2-203ENST00000414217 5842 ntAPPRIS P3 TSL 1 (best) BASIC4.11□□□□□ -1.75
RC3H1Q5TC82 USP33-201ENST00000357428 4155 ntTSL 5 BASIC4.1□□□□□ -1.75
RC3H1Q5TC82 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC4.1□□□□□ -1.75
RC3H1Q5TC82 BCLAF1P1-201ENST00000505813 2752 ntBASIC4.1□□□□□ -1.75
RC3H1Q5TC82 MBNL1-211ENST00000463374 5092 ntAPPRIS P4 TSL 1 (best) BASIC4.1□□□□□ -1.75
RC3H1Q5TC82 SNORD61-201ENST00000384252 73 ntBASIC4.1□□□□□ -1.75
RC3H1Q5TC82 Y_RNA.466-201ENST00000384294 113 ntBASIC4.1□□□□□ -1.75
RC3H1Q5TC82 MIR759-201ENST00000390224 91 ntBASIC4.1□□□□□ -1.75
RC3H1Q5TC82 Y_RNA.593-201ENST00000410292 98 ntBASIC4.1□□□□□ -1.75
RC3H1Q5TC82 snoU13.28-201ENST00000459235 104 ntBASIC4.1□□□□□ -1.75
RC3H1Q5TC82 AC112771.1-201ENST00000463581 102 ntBASIC4.1□□□□□ -1.75
RC3H1Q5TC82 RPL23AP67-201ENST00000465341 474 ntBASIC4.1□□□□□ -1.75
RC3H1Q5TC82 RN7SL330P-201ENST00000469709 307 ntBASIC4.1□□□□□ -1.75
RC3H1Q5TC82 RNU1-61P-201ENST00000516107 151 ntBASIC4.1□□□□□ -1.75
RC3H1Q5TC82 LINC02164-201ENST00000566684 272 ntTSL 3 BASIC4.1□□□□□ -1.75
RC3H1Q5TC82 MIR3186-201ENST00000577404 85 ntBASIC4.1□□□□□ -1.75
RC3H1Q5TC82 MIR3124-201ENST00000582636 67 ntBASIC4.1□□□□□ -1.75
RC3H1Q5TC82 uc_338.1-201ENST00000612113 180 ntBASIC4.1□□□□□ -1.75
RC3H1Q5TC82 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC4.1□□□□□ -1.75
RC3H1Q5TC82 LTN1-207ENST00000614971 7756 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
RC3H1Q5TC82 RGS18-201ENST00000367460 2150 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
RC3H1Q5TC82 MUC15-201ENST00000281268 2968 ntTSL 5 BASIC4.1□□□□□ -1.75
RC3H1Q5TC82 TET2-204ENST00000413648 4973 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
RC3H1Q5TC82 AC010889.1-201ENST00000566193 2666 ntBASIC4.09□□□□□ -1.75
RC3H1Q5TC82 RNU6-301P-201ENST00000384277 107 ntBASIC4.09□□□□□ -1.75
RC3H1Q5TC82 MIR1255A-201ENST00000408338 113 ntBASIC4.09□□□□□ -1.75
RC3H1Q5TC82 RNU2-49P-201ENST00000410666 184 ntBASIC4.09□□□□□ -1.75
RC3H1Q5TC82 RNA5SP229-201ENST00000410809 99 ntBASIC4.09□□□□□ -1.75
RC3H1Q5TC82 RPL30P4-201ENST00000429309 333 ntBASIC4.09□□□□□ -1.75
RC3H1Q5TC82 AC016717.1-201ENST00000448918 286 ntBASIC4.09□□□□□ -1.75
RC3H1Q5TC82 RPS27P22-201ENST00000478056 241 ntBASIC4.09□□□□□ -1.75
RC3H1Q5TC82 RPS26P48-201ENST00000491713 339 ntBASIC4.09□□□□□ -1.75
RC3H1Q5TC82 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC4.09□□□□□ -1.75
RC3H1Q5TC82 RNU6-240P-201ENST00000516098 97 ntBASIC4.09□□□□□ -1.75
RC3H1Q5TC82 RNU6-830P-201ENST00000516353 107 ntBASIC4.09□□□□□ -1.75
RC3H1Q5TC82 AC016597.1-201ENST00000564893 528 ntTSL 4 BASIC4.09□□□□□ -1.75
RC3H1Q5TC82 AC130469.1-201ENST00000597256 388 ntTSL 5 BASIC4.09□□□□□ -1.75
RC3H1Q5TC82 U6.73-201ENST00000619194 103 ntBASIC4.09□□□□□ -1.75
RC3H1Q5TC82 MIR3202-2-201ENST00000635980 79 ntBASIC4.09□□□□□ -1.75
RC3H1Q5TC82 LIG4-205ENST00000614526 3884 ntTSL 2 BASIC4.09□□□□□ -1.75
RC3H1Q5TC82 XIRP2-204ENST00000409273 12269 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
RC3H1Q5TC82 Y_RNA.107-201ENST00000363190 121 ntBASIC4.08□□□□□ -1.76
RC3H1Q5TC82 SNORA54-201ENST00000384281 123 ntBASIC4.08□□□□□ -1.76
RC3H1Q5TC82 RNU6-893P-201ENST00000458841 100 ntBASIC4.08□□□□□ -1.76
RC3H1Q5TC82 MIR3162-201ENST00000581818 82 ntBASIC4.08□□□□□ -1.76
RC3H1Q5TC82 AL110115.1-201ENST00000614396 364 ntBASIC4.08□□□□□ -1.76
RC3H1Q5TC82 DNAH12-202ENST00000351747 9542 ntTSL 5 BASIC4.08□□□□□ -1.76
RC3H1Q5TC82 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC4.08□□□□□ -1.76
RC3H1Q5TC82 AC006504.1-201ENST00000562493 3666 ntBASIC4.07□□□□□ -1.76
RC3H1Q5TC82 SYT14-208ENST00000637265 13567 ntTSL 5 BASIC4.07□□□□□ -1.76
RC3H1Q5TC82 Y_RNA.17-201ENST00000362433 111 ntBASIC4.07□□□□□ -1.76
RC3H1Q5TC82 RNU6-888P-201ENST00000363010 101 ntBASIC4.07□□□□□ -1.76
RC3H1Q5TC82 RNA5SP126-201ENST00000365092 109 ntBASIC4.07□□□□□ -1.76
RC3H1Q5TC82 SNORD24-201ENST00000383884 75 ntBASIC4.07□□□□□ -1.76
RC3H1Q5TC82 RNU6-972P-201ENST00000391208 107 ntBASIC4.07□□□□□ -1.76
RC3H1Q5TC82 RNY4P20-201ENST00000516678 93 ntBASIC4.07□□□□□ -1.76
RC3H1Q5TC82 RNU6-1270P-201ENST00000517128 108 ntBASIC4.07□□□□□ -1.76
RC3H1Q5TC82 MIR3117-201ENST00000584034 78 ntBASIC4.07□□□□□ -1.76
RC3H1Q5TC82 MIR486-1-201ENST00000612171 68 ntBASIC4.07□□□□□ -1.76
RC3H1Q5TC82 AC002546.1-201ENST00000588041 2504 ntBASIC4.07□□□□□ -1.76
RC3H1Q5TC82 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
RC3H1Q5TC82 OR6C1-202ENST00000642104 2055 ntAPPRIS P1 BASIC4.07□□□□□ -1.76
RC3H1Q5TC82 DAZ4-201ENST00000382296 2048 ntAPPRIS P5 TSL 5 BASIC4.07□□□□□ -1.76
RC3H1Q5TC82 KCNH7-204ENST00000618399 3713 ntTSL 5 BASIC4.07□□□□□ -1.76
RC3H1Q5TC82 LRMP-221ENST00000636465 4540 ntAPPRIS ALT2 TSL 5 BASIC4.06□□□□□ -1.76
RC3H1Q5TC82 TOP2A-201ENST00000423485 5758 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
RC3H1Q5TC82 RNU1-22P-201ENST00000363334 158 ntBASIC4.06□□□□□ -1.76
RC3H1Q5TC82 SNORA63D-201ENST00000364359 132 ntBASIC4.06□□□□□ -1.76
RC3H1Q5TC82 SNORD77.3-201ENST00000391113 65 ntBASIC4.06□□□□□ -1.76
RC3H1Q5TC82 RNA5SP310-201ENST00000459084 116 ntBASIC4.06□□□□□ -1.76
RC3H1Q5TC82 NDUFA4P2-201ENST00000489989 244 ntBASIC4.06□□□□□ -1.76
RC3H1Q5TC82 MRPS17P9-201ENST00000511924 393 ntBASIC4.06□□□□□ -1.76
RC3H1Q5TC82 AC079598.5-201ENST00000547460 117 ntBASIC4.06□□□□□ -1.76
RC3H1Q5TC82 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC4.06□□□□□ -1.76
RC3H1Q5TC82 5S_rRNA.12-201ENST00000617631 107 ntBASIC4.06□□□□□ -1.76
RC3H1Q5TC82 RAB3C-201ENST00000282878 8896 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
RC3H1Q5TC82 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC4.06□□□□□ -1.76
RC3H1Q5TC82 KIAA0586-215ENST00000619722 5597 ntAPPRIS ALT2 TSL 2 BASIC4.06□□□□□ -1.76
RC3H1Q5TC82 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
RC3H1Q5TC82 ZNF479-202ENST00000331162 2072 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
RC3H1Q5TC82 PARP8-211ENST00000505554 3825 ntTSL 5 BASIC4.05□□□□□ -1.76
RC3H1Q5TC82 PSMA5-201ENST00000271308 3729 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
RC3H1Q5TC82 CNOT6L-201ENST00000504123 8843 ntAPPRIS P1 TSL 2 BASIC4.05□□□□□ -1.76
RC3H1Q5TC82 Y_RNA.221-201ENST00000364248 96 ntBASIC4.05□□□□□ -1.76
RC3H1Q5TC82 SNORA71.1-201ENST00000364523 117 ntBASIC4.05□□□□□ -1.76
RC3H1Q5TC82 Y_RNA.265-201ENST00000364677 108 ntBASIC4.05□□□□□ -1.76
RC3H1Q5TC82 Y_RNA.344-201ENST00000365381 112 ntBASIC4.05□□□□□ -1.76
RC3H1Q5TC82 MT-TI-201ENST00000387365 69 ntBASIC4.05□□□□□ -1.76
RC3H1Q5TC82 AC008134.1-201ENST00000420943 193 ntBASIC4.05□□□□□ -1.76
RC3H1Q5TC82 MIR449C-201ENST00000516047 92 ntBASIC4.05□□□□□ -1.76
RC3H1Q5TC82 RNU6-948P-201ENST00000516374 107 ntBASIC4.05□□□□□ -1.76
RC3H1Q5TC82 MIR5047-201ENST00000579212 100 ntBASIC4.05□□□□□ -1.76
RC3H1Q5TC82 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC4.05□□□□□ -1.76
RC3H1Q5TC82 AC009487.4-201ENST00000624969 3585 ntBASIC4.05□□□□□ -1.76
RC3H1Q5TC82 KIF21A-203ENST00000541463 4866 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
RC3H1Q5TC82 TANK-201ENST00000259075 2152 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
RC3H1Q5TC82 BAZ2B-202ENST00000343439 2364 ntTSL 5 BASIC4.04□□□□□ -1.76
RC3H1Q5TC82 PHC3-215ENST00000495893 12666 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
RC3H1Q5TC82 EIF4EP4-201ENST00000424916 578 ntBASIC4.04□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 111.8 ms