Protein–RNA interactions for Protein: P55055

NR1H2, Oxysterols receptor LXR-beta, humanhuman

Predictions only

Length 460 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H2P55055 AC099677.2-201ENST00000436385 175 ntBASIC2.01□□□□□ -2.09
NR1H2P55055 MTND5P22-201ENST00000458380 195 ntBASIC2.01□□□□□ -2.09
NR1H2P55055 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC2.01□□□□□ -2.09
NR1H2P55055 RPL36AP21-201ENST00000490372 323 ntBASIC2.01□□□□□ -2.09
NR1H2P55055 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC2.01□□□□□ -2.09
NR1H2P55055 RNU6-155P-201ENST00000516347 100 ntBASIC2.01□□□□□ -2.09
NR1H2P55055 RNU7-110P-201ENST00000516891 62 ntBASIC2.01□□□□□ -2.09
NR1H2P55055 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC2.01□□□□□ -2.09
NR1H2P55055 AL137100.2-201ENST00000555786 315 ntBASIC2.01□□□□□ -2.09
NR1H2P55055 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC2.01□□□□□ -2.09
NR1H2P55055 DEFB122-202ENST00000569013 197 ntBASIC2.01□□□□□ -2.09
NR1H2P55055 AC006380.1-201ENST00000603598 186 ntBASIC2.01□□□□□ -2.09
NR1H2P55055 AC022441.3-201ENST00000605737 136 ntBASIC2.01□□□□□ -2.09
NR1H2P55055 AC011373.1-201ENST00000607270 237 ntBASIC2.01□□□□□ -2.09
NR1H2P55055 MIR376A1-201ENST00000616574 68 ntBASIC2.01□□□□□ -2.09
NR1H2P55055 AC009831.4-201ENST00000620744 325 ntBASIC2.01□□□□□ -2.09
NR1H2P55055 MIR6132-201ENST00000622083 109 ntBASIC2.01□□□□□ -2.09
NR1H2P55055 U6.115-201ENST00000636045 103 ntBASIC2.01□□□□□ -2.09
NR1H2P55055 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC2.01□□□□□ -2.09
NR1H2P55055 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC2.01□□□□□ -2.09
NR1H2P55055 AC092881.1-201ENST00000638218 2733 ntBASIC2.01□□□□□ -2.09
NR1H2P55055 CENPCP1-201ENST00000533085 2578 ntBASIC2.01□□□□□ -2.09
NR1H2P55055 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC2□□□□□ -2.09
NR1H2P55055 RNU6-661P-201ENST00000362409 107 ntBASIC2□□□□□ -2.09
NR1H2P55055 Y_RNA.19-201ENST00000362462 99 ntBASIC2□□□□□ -2.09
NR1H2P55055 Y_RNA.105-201ENST00000363182 111 ntBASIC2□□□□□ -2.09
NR1H2P55055 RNU6-770P-201ENST00000363929 105 ntBASIC2□□□□□ -2.09
NR1H2P55055 Y_RNA.446-201ENST00000384178 104 ntBASIC2□□□□□ -2.09
NR1H2P55055 RNU6-417P-201ENST00000384712 107 ntBASIC2□□□□□ -2.09
NR1H2P55055 AL355796.1-201ENST00000406706 323 ntBASIC2□□□□□ -2.09
NR1H2P55055 RNU4-30P-201ENST00000410245 143 ntBASIC2□□□□□ -2.09
NR1H2P55055 RNU2-54P-201ENST00000410299 190 ntBASIC2□□□□□ -2.09
NR1H2P55055 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC2□□□□□ -2.09
NR1H2P55055 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC2□□□□□ -2.09
NR1H2P55055 RNU6-966P-201ENST00000516479 104 ntBASIC2□□□□□ -2.09
NR1H2P55055 RNU2-12P-201ENST00000517216 168 ntBASIC2□□□□□ -2.09
NR1H2P55055 MDM2-232ENST00000544561 213 ntTSL 5 BASIC2□□□□□ -2.09
NR1H2P55055 MIR4300-201ENST00000581016 96 ntBASIC2□□□□□ -2.09
NR1H2P55055 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC2□□□□□ -2.09
NR1H2P55055 AC136443.5-201ENST00000603741 370 ntBASIC2□□□□□ -2.09
NR1H2P55055 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC2□□□□□ -2.09
NR1H2P55055 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC2□□□□□ -2.09
NR1H2P55055 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC2□□□□□ -2.09
NR1H2P55055 MTND5P6-201ENST00000422338 1798 ntBASIC2□□□□□ -2.09
NR1H2P55055 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC2□□□□□ -2.09
NR1H2P55055 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC1.99□□□□□ -2.09
NR1H2P55055 Y_RNA.26-201ENST00000362539 101 ntBASIC1.99□□□□□ -2.09
NR1H2P55055 Y_RNA.243-201ENST00000364481 109 ntBASIC1.99□□□□□ -2.09
NR1H2P55055 Y_RNA.276-201ENST00000364732 109 ntBASIC1.99□□□□□ -2.09
NR1H2P55055 Y_RNA.287-201ENST00000364853 94 ntBASIC1.99□□□□□ -2.09
NR1H2P55055 RNU6-806P-201ENST00000365147 105 ntBASIC1.99□□□□□ -2.09
NR1H2P55055 SNORA20B-201ENST00000384220 132 ntBASIC1.99□□□□□ -2.09
NR1H2P55055 SNORD115-46-201ENST00000390982 71 ntBASIC1.99□□□□□ -2.09
NR1H2P55055 SNORA48.3-201ENST00000391081 134 ntBASIC1.99□□□□□ -2.09
NR1H2P55055 RNA5SP323-201ENST00000391094 133 ntBASIC1.99□□□□□ -2.09
NR1H2P55055 RPL21P1-201ENST00000399532 476 ntBASIC1.99□□□□□ -2.09
NR1H2P55055 RNA5SP489-201ENST00000410986 109 ntBASIC1.99□□□□□ -2.09
NR1H2P55055 RNU6-1199P-201ENST00000411249 104 ntBASIC1.99□□□□□ -2.09
NR1H2P55055 AL390729.2-201ENST00000416137 156 ntBASIC1.99□□□□□ -2.09
NR1H2P55055 AC010598.1-201ENST00000510378 103 ntBASIC1.99□□□□□ -2.09
NR1H2P55055 RNU6-1045P-201ENST00000516321 107 ntBASIC1.99□□□□□ -2.09
NR1H2P55055 RNU1-142P-201ENST00000516682 145 ntBASIC1.99□□□□□ -2.09
NR1H2P55055 AP003715.1-201ENST00000532109 435 ntTSL 3 BASIC1.99□□□□□ -2.09
NR1H2P55055 AC084364.2-201ENST00000546924 395 ntBASIC1.99□□□□□ -2.09
NR1H2P55055 AL359075.3-201ENST00000613288 217 ntBASIC1.99□□□□□ -2.09
NR1H2P55055 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC1.99□□□□□ -2.09
NR1H2P55055 SNORD114-1-201ENST00000362705 72 ntBASIC1.98□□□□□ -2.09
NR1H2P55055 Y_RNA.64-201ENST00000362845 102 ntBASIC1.98□□□□□ -2.09
NR1H2P55055 SNORD113-8-201ENST00000363497 74 ntBASIC1.98□□□□□ -2.09
NR1H2P55055 Y_RNA.331-201ENST00000365267 102 ntBASIC1.98□□□□□ -2.09
NR1H2P55055 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC1.98□□□□□ -2.09
NR1H2P55055 RNU6-21P-201ENST00000384710 107 ntBASIC1.98□□□□□ -2.09
NR1H2P55055 RNU6-360P-201ENST00000390944 104 ntBASIC1.98□□□□□ -2.09
NR1H2P55055 RNU6-121P-201ENST00000410525 99 ntBASIC1.98□□□□□ -2.09
NR1H2P55055 Y_RNA.602-201ENST00000410535 92 ntBASIC1.98□□□□□ -2.09
NR1H2P55055 RPL23AP36-201ENST00000413895 458 ntBASIC1.98□□□□□ -2.09
NR1H2P55055 SUMO1P2-201ENST00000452524 304 ntBASIC1.98□□□□□ -2.09
NR1H2P55055 LINC01399-202ENST00000458450 244 ntBASIC1.98□□□□□ -2.09
NR1H2P55055 AC098869.1-201ENST00000481627 292 ntBASIC1.98□□□□□ -2.09
NR1H2P55055 AC010409.1-201ENST00000487382 476 ntBASIC1.98□□□□□ -2.09
NR1H2P55055 RNU6-635P-201ENST00000516651 102 ntBASIC1.98□□□□□ -2.09
NR1H2P55055 RNU6-548P-201ENST00000517083 115 ntBASIC1.98□□□□□ -2.09
NR1H2P55055 MIR3198-2-201ENST00000577868 80 ntBASIC1.98□□□□□ -2.09
NR1H2P55055 AC090398.1-202ENST00000580403 457 ntTSL 2 BASIC1.98□□□□□ -2.09
NR1H2P55055 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC1.98□□□□□ -2.09
NR1H2P55055 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC1.97□□□□□ -2.09
NR1H2P55055 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC1.97□□□□□ -2.09
NR1H2P55055 RNU6-238P-201ENST00000363313 106 ntBASIC1.97□□□□□ -2.09
NR1H2P55055 RNU6-324P-201ENST00000363957 106 ntBASIC1.97□□□□□ -2.09
NR1H2P55055 SNORD115-30-201ENST00000364117 82 ntBASIC1.97□□□□□ -2.09
NR1H2P55055 SNORA63D-201ENST00000364359 132 ntBASIC1.97□□□□□ -2.09
NR1H2P55055 RNU6-296P-201ENST00000384608 107 ntBASIC1.97□□□□□ -2.09
NR1H2P55055 RNU6-950P-201ENST00000384651 107 ntBASIC1.97□□□□□ -2.09
NR1H2P55055 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC1.97□□□□□ -2.09
NR1H2P55055 RNU6-1109P-201ENST00000391187 107 ntBASIC1.97□□□□□ -2.09
NR1H2P55055 RNU6ATAC15P-201ENST00000408279 121 ntBASIC1.97□□□□□ -2.09
NR1H2P55055 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC1.97□□□□□ -2.09
NR1H2P55055 AC245047.4-201ENST00000433189 144 ntBASIC1.97□□□□□ -2.09
NR1H2P55055 DYNLT3P2-201ENST00000442517 295 ntBASIC1.97□□□□□ -2.09
NR1H2P55055 AC005042.3-201ENST00000453230 174 ntBASIC1.97□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 156 ms