Protein–RNA interactions for Protein: P49959

MRE11, Double-strand break repair protein MRE11, humanhuman

Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRE11P49959 Y_RNA.441-201ENST00000384123 112 ntBASIC2.92□□□□□ -1.94
MRE11P49959 MIR29B2-201ENST00000385055 81 ntBASIC2.92□□□□□ -1.94
MRE11P49959 SNORA40.19-201ENST00000390846 128 ntBASIC2.92□□□□□ -1.94
MRE11P49959 AL135786.1-201ENST00000415892 214 ntBASIC2.92□□□□□ -1.94
MRE11P49959 SUMO1P4-201ENST00000429430 302 ntBASIC2.92□□□□□ -1.94
MRE11P49959 snoU13.18-201ENST00000459483 104 ntBASIC2.92□□□□□ -1.94
MRE11P49959 SRI-210ENST00000490437 570 ntTSL 2 BASIC2.92□□□□□ -1.94
MRE11P49959 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC2.92□□□□□ -1.94
MRE11P49959 RNA5SP112-201ENST00000515937 99 ntBASIC2.92□□□□□ -1.94
MRE11P49959 SCARNA17.1-201ENST00000516211 143 ntBASIC2.92□□□□□ -1.94
MRE11P49959 SCARNA17.2-201ENST00000516334 143 ntBASIC2.92□□□□□ -1.94
MRE11P49959 RNA5SP282-201ENST00000516355 108 ntBASIC2.92□□□□□ -1.94
MRE11P49959 AC136628.3-201ENST00000521868 290 ntBASIC2.92□□□□□ -1.94
MRE11P49959 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC2.92□□□□□ -1.94
MRE11P49959 SCARNA17.4-201ENST00000614296 143 ntBASIC2.92□□□□□ -1.94
MRE11P49959 hsa-mir-4536-1.1-201ENST00000636519 88 ntBASIC2.92□□□□□ -1.94
MRE11P49959 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC2.92□□□□□ -1.94
MRE11P49959 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC2.91□□□□□ -1.94
MRE11P49959 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC2.91□□□□□ -1.94
MRE11P49959 Y_RNA.8-201ENST00000362353 102 ntBASIC2.91□□□□□ -1.94
MRE11P49959 Y_RNA.361-201ENST00000365515 120 ntBASIC2.91□□□□□ -1.94
MRE11P49959 RNU6-1083P-201ENST00000384022 107 ntBASIC2.91□□□□□ -1.94
MRE11P49959 MIR586-201ENST00000385035 97 ntBASIC2.91□□□□□ -1.94
MRE11P49959 SNORA26.5-201ENST00000391215 123 ntBASIC2.91□□□□□ -1.94
MRE11P49959 KCNJ6-AS1-201ENST00000435001 357 ntTSL 5 BASIC2.91□□□□□ -1.94
MRE11P49959 RNU6-346P-201ENST00000516288 111 ntBASIC2.91□□□□□ -1.94
MRE11P49959 RNU6-1098P-201ENST00000516772 96 ntBASIC2.91□□□□□ -1.94
MRE11P49959 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC2.91□□□□□ -1.94
MRE11P49959 MIR3117-201ENST00000584034 78 ntBASIC2.91□□□□□ -1.94
MRE11P49959 U6.115-201ENST00000636045 103 ntBASIC2.91□□□□□ -1.94
MRE11P49959 SACS-201ENST00000382292 15324 ntAPPRIS P1 TSL 5 BASIC2.91□□□□□ -1.94
MRE11P49959 ZNF720P1-201ENST00000562403 1939 ntBASIC2.9□□□□□ -1.95
MRE11P49959 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC2.9□□□□□ -1.95
MRE11P49959 Y_RNA.7-201ENST00000362352 102 ntBASIC2.9□□□□□ -1.95
MRE11P49959 RNU6-1305P-201ENST00000364353 104 ntBASIC2.9□□□□□ -1.95
MRE11P49959 RNU4-17P-201ENST00000365598 141 ntBASIC2.9□□□□□ -1.95
MRE11P49959 Y_RNA.398-201ENST00000383952 99 ntBASIC2.9□□□□□ -1.95
MRE11P49959 MIR144-201ENST00000384886 86 ntBASIC2.9□□□□□ -1.95
MRE11P49959 MIR499A-201ENST00000384903 122 ntBASIC2.9□□□□□ -1.95
MRE11P49959 RN7SKP223-201ENST00000410582 62 ntBASIC2.9□□□□□ -1.95
MRE11P49959 RNU5E-9P-201ENST00000411164 104 ntBASIC2.9□□□□□ -1.95
MRE11P49959 AL359853.2-201ENST00000442108 353 ntTSL 2 BASIC2.9□□□□□ -1.95
MRE11P49959 AC011753.1-201ENST00000451001 220 ntBASIC2.9□□□□□ -1.95
MRE11P49959 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC2.9□□□□□ -1.95
MRE11P49959 AC068658.1-201ENST00000507509 388 ntTSL 2 BASIC2.9□□□□□ -1.95
MRE11P49959 RNA5SP82-201ENST00000516707 92 ntBASIC2.9□□□□□ -1.95
MRE11P49959 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC2.9□□□□□ -1.95
MRE11P49959 AC100767.1-201ENST00000528178 123 ntBASIC2.9□□□□□ -1.95
MRE11P49959 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC2.9□□□□□ -1.95
MRE11P49959 AC108706.1-201ENST00000611053 297 ntBASIC2.9□□□□□ -1.95
MRE11P49959 AC026523.1-201ENST00000617221 490 ntTSL 5 BASIC2.9□□□□□ -1.95
MRE11P49959 AC090517.3-201ENST00000625170 141 ntBASIC2.9□□□□□ -1.95
MRE11P49959 ZNF567-201ENST00000360729 2691 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
MRE11P49959 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC2.89□□□□□ -1.95
MRE11P49959 RNU6-486P-201ENST00000363116 107 ntBASIC2.89□□□□□ -1.95
MRE11P49959 Y_RNA.116-201ENST00000363292 103 ntBASIC2.89□□□□□ -1.95
MRE11P49959 MTCO2P33-201ENST00000402100 465 ntBASIC2.89□□□□□ -1.95
MRE11P49959 RNU2-2P-201ENST00000410396 191 ntBASIC2.89□□□□□ -1.95
MRE11P49959 RNU6-710P-201ENST00000410424 105 ntBASIC2.89□□□□□ -1.95
MRE11P49959 RNU4-53P-201ENST00000410828 140 ntBASIC2.89□□□□□ -1.95
MRE11P49959 TMSB4XP3-201ENST00000445144 114 ntBASIC2.89□□□□□ -1.95
MRE11P49959 HMGN2P9-201ENST00000476875 229 ntBASIC2.89□□□□□ -1.95
MRE11P49959 RNU5F-4P-201ENST00000516581 114 ntBASIC2.89□□□□□ -1.95
MRE11P49959 IGHVIII-5-1-201ENST00000523059 99 ntBASIC2.89□□□□□ -1.95
MRE11P49959 AC107958.3-201ENST00000553410 431 ntTSL 3 BASIC2.89□□□□□ -1.95
MRE11P49959 RNU2-4P-201ENST00000606190 192 ntBASIC2.89□□□□□ -1.95
MRE11P49959 U2.15-201ENST00000611544 191 ntBASIC2.89□□□□□ -1.95
MRE11P49959 U2.16-201ENST00000613119 191 ntBASIC2.89□□□□□ -1.95
MRE11P49959 U2.12-201ENST00000613778 191 ntBASIC2.89□□□□□ -1.95
MRE11P49959 U2.9-201ENST00000615427 191 ntBASIC2.89□□□□□ -1.95
MRE11P49959 U2.11-201ENST00000616345 191 ntBASIC2.89□□□□□ -1.95
MRE11P49959 U2.2-201ENST00000616535 191 ntBASIC2.89□□□□□ -1.95
MRE11P49959 U2.3-201ENST00000617785 191 ntBASIC2.89□□□□□ -1.95
MRE11P49959 U2.19-201ENST00000618602 191 ntBASIC2.89□□□□□ -1.95
MRE11P49959 RNU2-1-201ENST00000618664 191 ntBASIC2.89□□□□□ -1.95
MRE11P49959 U2.6-201ENST00000619225 191 ntBASIC2.89□□□□□ -1.95
MRE11P49959 U2.5-201ENST00000619465 191 ntBASIC2.89□□□□□ -1.95
MRE11P49959 U2.10-201ENST00000620268 191 ntBASIC2.89□□□□□ -1.95
MRE11P49959 MIR7515-201ENST00000637837 67 ntBASIC2.89□□□□□ -1.95
MRE11P49959 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC2.89□□□□□ -1.95
MRE11P49959 AC132825.6-201ENST00000638861 357 ntBASIC2.89□□□□□ -1.95
MRE11P49959 AC068700.1-201ENST00000565862 3754 ntBASIC2.88□□□□□ -1.95
MRE11P49959 RNU1-72P-201ENST00000362976 153 ntBASIC2.88□□□□□ -1.95
MRE11P49959 Y_RNA.121-201ENST00000363309 113 ntBASIC2.88□□□□□ -1.95
MRE11P49959 Y_RNA.368-201ENST00000365547 113 ntBASIC2.88□□□□□ -1.95
MRE11P49959 SNORA72.4-201ENST00000384174 132 ntBASIC2.88□□□□□ -1.95
MRE11P49959 MIR9-1-201ENST00000385198 89 ntBASIC2.88□□□□□ -1.95
MRE11P49959 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC2.88□□□□□ -1.95
MRE11P49959 AL356280.1-201ENST00000603614 379 ntBASIC2.88□□□□□ -1.95
MRE11P49959 AC013791.1-201ENST00000616619 62 ntBASIC2.88□□□□□ -1.95
MRE11P49959 TSLP-202ENST00000379706 2411 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
MRE11P49959 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC2.87□□□□□ -1.95
MRE11P49959 SNORD114-1-201ENST00000362705 72 ntBASIC2.87□□□□□ -1.95
MRE11P49959 RNU6-1048P-201ENST00000364054 107 ntBASIC2.87□□□□□ -1.95
MRE11P49959 Y_RNA.287-201ENST00000364853 94 ntBASIC2.87□□□□□ -1.95
MRE11P49959 Y_RNA.412-201ENST00000384001 104 ntBASIC2.87□□□□□ -1.95
MRE11P49959 RNU6-1274P-201ENST00000384557 107 ntBASIC2.87□□□□□ -1.95
MRE11P49959 MIR27B-201ENST00000385129 97 ntBASIC2.87□□□□□ -1.95
MRE11P49959 MIR613-201ENST00000385248 95 ntBASIC2.87□□□□□ -1.95
MRE11P49959 MIR1185-2-201ENST00000408687 86 ntBASIC2.87□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 103.3 ms