Protein–RNA interactions for Protein: P35523

CLCN1, Chloride channel protein 1, humanhuman

Predictions only

Length 988 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN1P35523 THEMIS-201ENST00000368248 3866 ntAPPRIS P3 TSL 1 (best) BASIC4.03□□□□□ -1.76
CLCN1P35523 ATM-203ENST00000452508 12954 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
CLCN1P35523 WNK3-202ENST00000375159 5403 ntAPPRIS P3 TSL 1 (best) BASIC4.03□□□□□ -1.76
CLCN1P35523 SNORD77.3-201ENST00000391113 65 ntBASIC4.03□□□□□ -1.76
CLCN1P35523 SNORA3.3-201ENST00000408712 125 ntBASIC4.03□□□□□ -1.76
CLCN1P35523 RN7SKP123-201ENST00000410732 291 ntBASIC4.03□□□□□ -1.76
CLCN1P35523 RNA5SP136-201ENST00000410906 107 ntBASIC4.03□□□□□ -1.76
CLCN1P35523 CALM2P4-201ENST00000430810 426 ntBASIC4.03□□□□□ -1.76
CLCN1P35523 Y_RNA.677-201ENST00000516401 85 ntBASIC4.03□□□□□ -1.76
CLCN1P35523 RNU1-142P-201ENST00000516682 145 ntBASIC4.03□□□□□ -1.76
CLCN1P35523 RNU6-667P-201ENST00000517186 102 ntBASIC4.03□□□□□ -1.76
CLCN1P35523 MIR5582-201ENST00000579697 68 ntBASIC4.03□□□□□ -1.76
CLCN1P35523 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC4.02□□□□□ -1.77
CLCN1P35523 ZNF271P-202ENST00000465539 1970 ntBASIC4.02□□□□□ -1.77
CLCN1P35523 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC4.02□□□□□ -1.77
CLCN1P35523 AC093831.2-201ENST00000624393 3427 ntBASIC4.02□□□□□ -1.77
CLCN1P35523 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC4.02□□□□□ -1.77
CLCN1P35523 SNORA70.4-201ENST00000365509 134 ntBASIC4.02□□□□□ -1.77
CLCN1P35523 MIR30B-201ENST00000384850 88 ntBASIC4.02□□□□□ -1.77
CLCN1P35523 MIR561-201ENST00000385216 97 ntBASIC4.02□□□□□ -1.77
CLCN1P35523 RNA5SP323-201ENST00000391094 133 ntBASIC4.02□□□□□ -1.77
CLCN1P35523 LINC02532-205ENST00000430094 628 ntTSL 5 BASIC4.02□□□□□ -1.77
CLCN1P35523 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC4.02□□□□□ -1.77
CLCN1P35523 RPS29P12-201ENST00000460178 152 ntBASIC4.02□□□□□ -1.77
CLCN1P35523 RN7SKP282-201ENST00000516824 299 ntBASIC4.02□□□□□ -1.77
CLCN1P35523 AC007012.1-201ENST00000567192 175 ntBASIC4.02□□□□□ -1.77
CLCN1P35523 AP005271.1-201ENST00000582470 412 ntTSL 3 BASIC4.02□□□□□ -1.77
CLCN1P35523 AL137067.1-201ENST00000615933 120 ntBASIC4.02□□□□□ -1.77
CLCN1P35523 MIR338-201ENST00000636369 67 ntBASIC4.02□□□□□ -1.77
CLCN1P35523 CUL3-204ENST00000409777 3147 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
CLCN1P35523 RNU6-525P-201ENST00000363685 104 ntBASIC4.01□□□□□ -1.77
CLCN1P35523 RNA5SP387-201ENST00000364226 106 ntBASIC4.01□□□□□ -1.77
CLCN1P35523 Y_RNA.281-201ENST00000364774 94 ntBASIC4.01□□□□□ -1.77
CLCN1P35523 RNU6-106P-201ENST00000384405 107 ntBASIC4.01□□□□□ -1.77
CLCN1P35523 MIR570-201ENST00000384917 97 ntBASIC4.01□□□□□ -1.77
CLCN1P35523 MIR548A2-201ENST00000384956 97 ntBASIC4.01□□□□□ -1.77
CLCN1P35523 TRAJ18-201ENST00000390519 66 ntAPPRIS P1 BASIC4.01□□□□□ -1.77
CLCN1P35523 RN7SL542P-201ENST00000467147 294 ntBASIC4.01□□□□□ -1.77
CLCN1P35523 RNA5SP164-201ENST00000516533 110 ntBASIC4.01□□□□□ -1.77
CLCN1P35523 AL358944.1-201ENST00000528537 144 ntBASIC4.01□□□□□ -1.77
CLCN1P35523 AC026333.2-201ENST00000542164 106 ntBASIC4.01□□□□□ -1.77
CLCN1P35523 AL591926.4-201ENST00000616895 298 ntBASIC4.01□□□□□ -1.77
CLCN1P35523 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
CLCN1P35523 KIAA1109-203ENST00000388738 15574 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
CLCN1P35523 SEMA3D-201ENST00000284136 6265 ntAPPRIS P1 TSL 5 BASIC4□□□□□ -1.77
CLCN1P35523 CUL4B-202ENST00000371322 4902 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
CLCN1P35523 RNF6-201ENST00000346166 3282 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
CLCN1P35523 DCUN1D1-201ENST00000292782 7954 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
CLCN1P35523 CEP44-201ENST00000296519 4173 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
CLCN1P35523 RNU6-1107P-201ENST00000364817 104 ntBASIC4□□□□□ -1.77
CLCN1P35523 Y_RNA.366-201ENST00000365540 102 ntBASIC4□□□□□ -1.77
CLCN1P35523 MIR592-201ENST00000384959 97 ntBASIC4□□□□□ -1.77
CLCN1P35523 TRIAP1P1-201ENST00000427062 225 ntBASIC4□□□□□ -1.77
CLCN1P35523 AL353689.1-201ENST00000438895 199 ntBASIC4□□□□□ -1.77
CLCN1P35523 CYCSP30-201ENST00000546447 172 ntBASIC4□□□□□ -1.77
CLCN1P35523 MIR3944-201ENST00000581277 108 ntBASIC4□□□□□ -1.77
CLCN1P35523 MIR6075-201ENST00000620782 95 ntBASIC4□□□□□ -1.77
CLCN1P35523 AC106754.2-201ENST00000623006 233 ntBASIC4□□□□□ -1.77
CLCN1P35523 MBNL3-204ENST00000370853 2661 ntAPPRIS P4 TSL 1 (best) BASIC4□□□□□ -1.77
CLCN1P35523 MIR133A1HG-202ENST00000581072 4226 ntTSL 1 (best) BASIC4□□□□□ -1.77
CLCN1P35523 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC4□□□□□ -1.77
CLCN1P35523 DCLRE1A-202ENST00000369305 4241 ntAPPRIS P1 TSL 5 BASIC4□□□□□ -1.77
CLCN1P35523 SNORD12C-201ENST00000386307 89 ntBASIC3.99□□□□□ -1.77
CLCN1P35523 RNA5SP424-201ENST00000390988 115 ntBASIC3.99□□□□□ -1.77
CLCN1P35523 RNU6-554P-201ENST00000410466 106 ntBASIC3.99□□□□□ -1.77
CLCN1P35523 AL049830.1-201ENST00000468034 425 ntBASIC3.99□□□□□ -1.77
CLCN1P35523 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC3.99□□□□□ -1.77
CLCN1P35523 SCARNA15-202ENST00000516881 127 ntBASIC3.99□□□□□ -1.77
CLCN1P35523 AC087499.8-201ENST00000578406 226 ntBASIC3.99□□□□□ -1.77
CLCN1P35523 MIR4286-201ENST00000580651 93 ntBASIC3.99□□□□□ -1.77
CLCN1P35523 AC073476.4-201ENST00000628409 72 ntBASIC3.99□□□□□ -1.77
CLCN1P35523 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC3.98□□□□□ -1.77
CLCN1P35523 GNAI3-201ENST00000369851 27174 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
CLCN1P35523 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC3.98□□□□□ -1.77
CLCN1P35523 ARHGAP12-201ENST00000311380 4625 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
CLCN1P35523 MIR518F-201ENST00000384973 87 ntBASIC3.98□□□□□ -1.77
CLCN1P35523 TRAJ16-201ENST00000390521 60 ntAPPRIS P1 BASIC3.98□□□□□ -1.77
CLCN1P35523 PTMAP2-201ENST00000397627 327 ntBASIC3.98□□□□□ -1.77
CLCN1P35523 RNY4P30-201ENST00000410216 95 ntBASIC3.98□□□□□ -1.77
CLCN1P35523 COX6CP6-201ENST00000490840 228 ntBASIC3.98□□□□□ -1.77
CLCN1P35523 RNU1-143P-201ENST00000516296 146 ntBASIC3.98□□□□□ -1.77
CLCN1P35523 U1.23-201ENST00000610293 146 ntBASIC3.98□□□□□ -1.77
CLCN1P35523 AL353149.1-201ENST00000610667 244 ntBASIC3.98□□□□□ -1.77
CLCN1P35523 RNU1-68P-201ENST00000615382 146 ntBASIC3.98□□□□□ -1.77
CLCN1P35523 U1.39-201ENST00000621562 146 ntBASIC3.98□□□□□ -1.77
CLCN1P35523 U6.108-201ENST00000637764 58 ntBASIC3.98□□□□□ -1.77
CLCN1P35523 PREPL-207ENST00000409957 4703 ntTSL 5 BASIC3.98□□□□□ -1.77
CLCN1P35523 ZNF483-201ENST00000309235 3655 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
CLCN1P35523 RTN4-208ENST00000404909 4102 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
CLCN1P35523 DST-204ENST00000361203 22431 ntAPPRIS ALT2 TSL 5 BASIC3.97□□□□□ -1.77
CLCN1P35523 Y_RNA.333-201ENST00000365274 102 ntBASIC3.97□□□□□ -1.77
CLCN1P35523 SNORA8-201ENST00000384574 139 ntBASIC3.97□□□□□ -1.77
CLCN1P35523 RPL23AP83-201ENST00000434984 473 ntBASIC3.97□□□□□ -1.77
CLCN1P35523 RPS29P7-201ENST00000439662 171 ntBASIC3.97□□□□□ -1.77
CLCN1P35523 AP002004.2-201ENST00000531656 154 ntBASIC3.97□□□□□ -1.77
CLCN1P35523 NBPF20-201ENST00000369373 18760 ntAPPRIS ALT2 TSL 5 BASIC3.97□□□□□ -1.77
CLCN1P35523 SNORA1B-201ENST00000362535 133 ntBASIC3.96□□□□□ -1.78
CLCN1P35523 SNORD46.1-201ENST00000364139 104 ntBASIC3.96□□□□□ -1.78
CLCN1P35523 MIR200C-201ENST00000384980 68 ntBASIC3.96□□□□□ -1.78
CLCN1P35523 MIR522-201ENST00000385071 87 ntBASIC3.96□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 111.9 ms