Protein–RNA interactions for Protein: P29279

CTGF, Connective tissue growth factor, humanhuman

Predictions only

Length 349 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTGFP29279 RNU6-239P-201ENST00000390990 99 ntBASIC2.65□□□□□ -1.99
CTGFP29279 RNU6-1064P-201ENST00000410626 104 ntBASIC2.65□□□□□ -1.99
CTGFP29279 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC2.65□□□□□ -1.99
CTGFP29279 AL390729.2-201ENST00000416137 156 ntBASIC2.65□□□□□ -1.99
CTGFP29279 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC2.65□□□□□ -1.99
CTGFP29279 U8.19-201ENST00000459095 133 ntBASIC2.65□□□□□ -1.99
CTGFP29279 RNA5SP76-201ENST00000516277 87 ntBASIC2.65□□□□□ -1.99
CTGFP29279 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC2.65□□□□□ -1.99
CTGFP29279 MIR7157-201ENST00000635801 60 ntBASIC2.65□□□□□ -1.99
CTGFP29279 PIK3C2G-206ENST00000538779 4963 ntTSL 5 BASIC2.65□□□□□ -1.99
CTGFP29279 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC2.65□□□□□ -1.99
CTGFP29279 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC2.65□□□□□ -1.99
CTGFP29279 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC2.64□□□□□ -1.99
CTGFP29279 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC2.64□□□□□ -1.99
CTGFP29279 Y_RNA.388-201ENST00000383919 113 ntBASIC2.64□□□□□ -1.99
CTGFP29279 RNU6-476P-201ENST00000384726 107 ntBASIC2.64□□□□□ -1.99
CTGFP29279 SNORA80E-201ENST00000384744 137 ntBASIC2.64□□□□□ -1.99
CTGFP29279 ELOCP21-201ENST00000412558 336 ntBASIC2.64□□□□□ -1.99
CTGFP29279 AC027124.2-201ENST00000428249 105 ntBASIC2.64□□□□□ -1.99
CTGFP29279 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC2.64□□□□□ -1.99
CTGFP29279 RNU6-625P-201ENST00000459412 107 ntBASIC2.64□□□□□ -1.99
CTGFP29279 Y_RNA.637-201ENST00000459424 114 ntBASIC2.64□□□□□ -1.99
CTGFP29279 AC092991.1-201ENST00000477176 376 ntBASIC2.64□□□□□ -1.99
CTGFP29279 RNU6-589P-201ENST00000516485 107 ntBASIC2.64□□□□□ -1.99
CTGFP29279 RNU6-344P-201ENST00000516635 111 ntBASIC2.64□□□□□ -1.99
CTGFP29279 RNU6-453P-201ENST00000516819 85 ntBASIC2.64□□□□□ -1.99
CTGFP29279 AC107973.1-201ENST00000530249 576 ntTSL 4 BASIC2.64□□□□□ -1.99
CTGFP29279 AC018448.1-201ENST00000552843 316 ntBASIC2.64□□□□□ -1.99
CTGFP29279 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC2.64□□□□□ -1.99
CTGFP29279 MTND5P34-201ENST00000568888 325 ntBASIC2.64□□□□□ -1.99
CTGFP29279 DEFB117-201ENST00000602356 141 ntBASIC2.64□□□□□ -1.99
CTGFP29279 AC108081.1-201ENST00000604358 221 ntBASIC2.64□□□□□ -1.99
CTGFP29279 MIR7515-201ENST00000637837 67 ntBASIC2.64□□□□□ -1.99
CTGFP29279 LCOR-205ENST00000421806 16004 ntTSL 3 BASIC2.64□□□□□ -1.99
CTGFP29279 RGS18-201ENST00000367460 2150 ntAPPRIS P1 TSL 1 (best) BASIC2.64□□□□□ -1.99
CTGFP29279 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC2.64□□□□□ -1.99
CTGFP29279 AC134026.1-201ENST00000623249 2239 ntBASIC2.64□□□□□ -1.99
CTGFP29279 SYTL2-230ENST00000634661 6672 ntTSL 5 BASIC2.63□□□□□ -1.99
CTGFP29279 FTX-214ENST00000638437 12267 ntTSL 5 BASIC2.63□□□□□ -1.99
CTGFP29279 AC008264.2-201ENST00000610193 3731 ntBASIC2.63□□□□□ -1.99
CTGFP29279 LUZP4-201ENST00000371920 1701 ntAPPRIS P2 TSL 1 (best) BASIC2.63□□□□□ -1.99
CTGFP29279 RNU6-235P-201ENST00000362644 107 ntBASIC2.63□□□□□ -1.99
CTGFP29279 RNU6-1272P-201ENST00000362776 107 ntBASIC2.63□□□□□ -1.99
CTGFP29279 Y_RNA.140-201ENST00000363474 103 ntBASIC2.63□□□□□ -1.99
CTGFP29279 Y_RNA.172-201ENST00000363765 102 ntBASIC2.63□□□□□ -1.99
CTGFP29279 RNU6-755P-201ENST00000364400 103 ntBASIC2.63□□□□□ -1.99
CTGFP29279 SNORD32B-201ENST00000364460 84 ntBASIC2.63□□□□□ -1.99
CTGFP29279 SNORA68.1-201ENST00000364537 132 ntBASIC2.63□□□□□ -1.99
CTGFP29279 SNORA18.2-201ENST00000383865 132 ntBASIC2.63□□□□□ -1.99
CTGFP29279 U8.13-201ENST00000390842 128 ntBASIC2.63□□□□□ -1.99
CTGFP29279 SNORA12-201ENST00000391162 147 ntBASIC2.63□□□□□ -1.99
CTGFP29279 RNU6ATAC40P-201ENST00000408580 137 ntBASIC2.63□□□□□ -1.99
CTGFP29279 RNU6-1328P-201ENST00000410938 106 ntBASIC2.63□□□□□ -1.99
CTGFP29279 RPL30P13-201ENST00000418873 348 ntBASIC2.63□□□□□ -1.99
CTGFP29279 AL135790.2-201ENST00000437701 267 ntBASIC2.63□□□□□ -1.99
CTGFP29279 AC004386.2-201ENST00000441858 148 ntBASIC2.63□□□□□ -1.99
CTGFP29279 SCARNA8-201ENST00000515924 131 ntBASIC2.63□□□□□ -1.99
CTGFP29279 HSPE1P18-201ENST00000517602 280 ntBASIC2.63□□□□□ -1.99
CTGFP29279 CYCSP26-201ENST00000534107 320 ntBASIC2.63□□□□□ -1.99
CTGFP29279 MIR5007-201ENST00000583098 95 ntBASIC2.63□□□□□ -1.99
CTGFP29279 AC005176.2-201ENST00000596933 147 ntBASIC2.63□□□□□ -1.99
CTGFP29279 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC2.63□□□□□ -1.99
CTGFP29279 AP000942.3-201ENST00000603702 160 ntBASIC2.63□□□□□ -1.99
CTGFP29279 RPL17P51-201ENST00000605218 238 ntBASIC2.63□□□□□ -1.99
CTGFP29279 SNORD11B-201ENST00000607707 90 ntBASIC2.63□□□□□ -1.99
CTGFP29279 AC011603.4-201ENST00000611325 277 ntBASIC2.63□□□□□ -1.99
CTGFP29279 AC090517.3-201ENST00000625170 141 ntBASIC2.63□□□□□ -1.99
CTGFP29279 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC2.63□□□□□ -1.99
CTGFP29279 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC2.63□□□□□ -1.99
CTGFP29279 FGF7-201ENST00000267843 5467 ntAPPRIS P1 TSL 1 (best) BASIC2.62□□□□□ -1.99
CTGFP29279 RNU1-72P-201ENST00000362976 153 ntBASIC2.62□□□□□ -1.99
CTGFP29279 RNU6-727P-201ENST00000363592 107 ntBASIC2.62□□□□□ -1.99
CTGFP29279 RNU6-275P-201ENST00000364910 107 ntBASIC2.62□□□□□ -1.99
CTGFP29279 RNU6-1199P-201ENST00000411249 104 ntBASIC2.62□□□□□ -1.99
CTGFP29279 AC004866.1-201ENST00000411748 78 ntBASIC2.62□□□□□ -1.99
CTGFP29279 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC2.62□□□□□ -1.99
CTGFP29279 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC2.62□□□□□ -1.99
CTGFP29279 RPL30P4-201ENST00000429309 333 ntBASIC2.62□□□□□ -1.99
CTGFP29279 MTCO1P44-201ENST00000441935 243 ntBASIC2.62□□□□□ -1.99
CTGFP29279 AC074131.1-201ENST00000514662 253 ntTSL 2 BASIC2.62□□□□□ -1.99
CTGFP29279 SCARNA3-201ENST00000517097 143 ntBASIC2.62□□□□□ -1.99
CTGFP29279 AP005660.1-201ENST00000522972 293 ntBASIC2.62□□□□□ -1.99
CTGFP29279 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC2.62□□□□□ -1.99
CTGFP29279 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC2.62□□□□□ -1.99
CTGFP29279 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC2.62□□□□□ -1.99
CTGFP29279 MIR5006-201ENST00000583027 110 ntBASIC2.62□□□□□ -1.99
CTGFP29279 snoZ196.1-201ENST00000625269 89 ntBASIC2.62□□□□□ -1.99
CTGFP29279 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC2.62□□□□□ -1.99
CTGFP29279 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC2.61□□□□□ -1.99
CTGFP29279 MIR450A1-201ENST00000362262 91 ntBASIC2.61□□□□□ -1.99
CTGFP29279 RNU6-1048P-201ENST00000364054 107 ntBASIC2.61□□□□□ -1.99
CTGFP29279 Y_RNA.226-201ENST00000364337 114 ntBASIC2.61□□□□□ -1.99
CTGFP29279 SNORD73B-201ENST00000364394 72 ntBASIC2.61□□□□□ -1.99
CTGFP29279 RNU6-1164P-201ENST00000364428 107 ntBASIC2.61□□□□□ -1.99
CTGFP29279 RNU4-17P-201ENST00000365598 141 ntBASIC2.61□□□□□ -1.99
CTGFP29279 RNU6-1144P-201ENST00000384247 104 ntBASIC2.61□□□□□ -1.99
CTGFP29279 Y_RNA.498-201ENST00000384460 102 ntBASIC2.61□□□□□ -1.99
CTGFP29279 Y_RNA.563-201ENST00000384707 108 ntBASIC2.61□□□□□ -1.99
CTGFP29279 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC2.61□□□□□ -1.99
CTGFP29279 SNORA40.5-201ENST00000391061 128 ntBASIC2.61□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 111.7 ms