Protein–RNA interactions for Protein: P18848

ATF4, Cyclic AMP-dependent transcription factor ATF-4, humanhuman

Predicted RBP Predictions only

Length 351 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATF4P18848 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC2.76□□□□□ -1.97
ATF4P18848 AC025254.1-201ENST00000550035 247 ntTSL 5 BASIC2.76□□□□□ -1.97
ATF4P18848 RPL23AP91-201ENST00000569211 455 ntBASIC2.76□□□□□ -1.97
ATF4P18848 AP003355.3-201ENST00000623465 114 ntBASIC2.76□□□□□ -1.97
ATF4P18848 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC2.76□□□□□ -1.97
ATF4P18848 FOXP2-211ENST00000408937 6443 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
ATF4P18848 LIG4-205ENST00000614526 3884 ntTSL 2 BASIC2.76□□□□□ -1.97
ATF4P18848 Z82195.2-201ENST00000612348 18351 ntBASIC2.75□□□□□ -1.97
ATF4P18848 RGPD6-201ENST00000329516 7165 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
ATF4P18848 SNORA63.1-201ENST00000362493 131 ntBASIC2.75□□□□□ -1.97
ATF4P18848 Y_RNA.75-201ENST00000362927 97 ntBASIC2.75□□□□□ -1.97
ATF4P18848 SNORD46.1-201ENST00000364139 104 ntBASIC2.75□□□□□ -1.97
ATF4P18848 RNA5SP72-201ENST00000364442 117 ntBASIC2.75□□□□□ -1.97
ATF4P18848 RNU6-950P-201ENST00000384651 107 ntBASIC2.75□□□□□ -1.97
ATF4P18848 RNU2-7P-201ENST00000410794 178 ntBASIC2.75□□□□□ -1.97
ATF4P18848 MTND2P29-201ENST00000438595 412 ntBASIC2.75□□□□□ -1.97
ATF4P18848 RPL23AP67-201ENST00000465341 474 ntBASIC2.75□□□□□ -1.97
ATF4P18848 RN7SKP18-201ENST00000516005 275 ntBASIC2.75□□□□□ -1.97
ATF4P18848 RNU6-1219P-201ENST00000516143 112 ntBASIC2.75□□□□□ -1.97
ATF4P18848 RNU6-579P-201ENST00000516879 102 ntBASIC2.75□□□□□ -1.97
ATF4P18848 SCARNA20.6-201ENST00000517251 106 ntBASIC2.75□□□□□ -1.97
ATF4P18848 AC026333.2-201ENST00000542164 106 ntBASIC2.75□□□□□ -1.97
ATF4P18848 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC2.75□□□□□ -1.97
ATF4P18848 FIGNL1-203ENST00000419119 3700 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
ATF4P18848 FRS2-201ENST00000397997 6550 ntAPPRIS P1 TSL 5 BASIC2.74□□□□□ -1.97
ATF4P18848 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC2.74□□□□□ -1.97
ATF4P18848 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
ATF4P18848 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC2.74□□□□□ -1.97
ATF4P18848 RNU6-525P-201ENST00000363685 104 ntBASIC2.74□□□□□ -1.97
ATF4P18848 U8.11-201ENST00000384699 133 ntBASIC2.74□□□□□ -1.97
ATF4P18848 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC2.74□□□□□ -1.97
ATF4P18848 RNU6-578P-201ENST00000390980 103 ntBASIC2.74□□□□□ -1.97
ATF4P18848 AL606845.1-201ENST00000404881 255 ntBASIC2.74□□□□□ -1.97
ATF4P18848 SNORD88.1-201ENST00000408684 91 ntBASIC2.74□□□□□ -1.97
ATF4P18848 RNA5SP501-201ENST00000410990 112 ntBASIC2.74□□□□□ -1.97
ATF4P18848 RN7SKP101-201ENST00000411376 320 ntBASIC2.74□□□□□ -1.97
ATF4P18848 AL035423.1-201ENST00000420331 213 ntBASIC2.74□□□□□ -1.97
ATF4P18848 PRSS3P4-201ENST00000453323 162 ntBASIC2.74□□□□□ -1.97
ATF4P18848 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC2.74□□□□□ -1.97
ATF4P18848 U8.18-201ENST00000459285 133 ntBASIC2.74□□□□□ -1.97
ATF4P18848 RN7SL20P-201ENST00000488827 297 ntBASIC2.74□□□□□ -1.97
ATF4P18848 HMGN1P7-201ENST00000491722 313 ntBASIC2.74□□□□□ -1.97
ATF4P18848 RNVU1-2-201ENST00000516326 135 ntBASIC2.74□□□□□ -1.97
ATF4P18848 RNU7-28P-201ENST00000516759 62 ntBASIC2.74□□□□□ -1.97
ATF4P18848 SCARNA14-201ENST00000516903 136 ntBASIC2.74□□□□□ -1.97
ATF4P18848 MRPS18CP4-201ENST00000535821 231 ntBASIC2.74□□□□□ -1.97
ATF4P18848 AC023490.3-201ENST00000621762 358 ntTSL 3 BASIC2.74□□□□□ -1.97
ATF4P18848 AP000550.4-201ENST00000639507 358 ntTSL 3 BASIC2.74□□□□□ -1.97
ATF4P18848 AC009093.8-201ENST00000641769 292 ntBASIC2.74□□□□□ -1.97
ATF4P18848 ZNF680-202ENST00000447137 2159 ntTSL 2 BASIC2.74□□□□□ -1.97
ATF4P18848 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC2.74□□□□□ -1.97
ATF4P18848 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC2.74□□□□□ -1.97
ATF4P18848 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC2.73□□□□□ -1.97
ATF4P18848 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC2.73□□□□□ -1.97
ATF4P18848 SNORA1B-201ENST00000362535 133 ntBASIC2.73□□□□□ -1.97
ATF4P18848 RNU1-70P-201ENST00000362618 164 ntBASIC2.73□□□□□ -1.97
ATF4P18848 SNORA67.1-201ENST00000364749 141 ntBASIC2.73□□□□□ -1.97
ATF4P18848 RNU6-275P-201ENST00000364910 107 ntBASIC2.73□□□□□ -1.97
ATF4P18848 RNU6-728P-201ENST00000365375 104 ntBASIC2.73□□□□□ -1.97
ATF4P18848 MIR520A-201ENST00000384862 85 ntBASIC2.73□□□□□ -1.97
ATF4P18848 MIR34B-201ENST00000385076 84 ntBASIC2.73□□□□□ -1.97
ATF4P18848 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC2.73□□□□□ -1.97
ATF4P18848 HMGN2P35-201ENST00000412164 270 ntBASIC2.73□□□□□ -1.97
ATF4P18848 ATP5A1P2-201ENST00000412323 255 ntBASIC2.73□□□□□ -1.97
ATF4P18848 RNU6-453P-201ENST00000516819 85 ntBASIC2.73□□□□□ -1.97
ATF4P18848 AP002992.1-202ENST00000530842 551 ntTSL 2 BASIC2.73□□□□□ -1.97
ATF4P18848 AC022217.4-201ENST00000604389 163 ntBASIC2.73□□□□□ -1.97
ATF4P18848 U3.45-201ENST00000607547 219 ntBASIC2.73□□□□□ -1.97
ATF4P18848 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC2.73□□□□□ -1.97
ATF4P18848 MIR7851-201ENST00000610611 160 ntBASIC2.73□□□□□ -1.97
ATF4P18848 CTSLP2-204ENST00000629029 392 ntBASIC2.73□□□□□ -1.97
ATF4P18848 FOXP2-227ENST00000638397 240 ntTSL 5 BASIC2.73□□□□□ -1.97
ATF4P18848 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC2.72□□□□□ -1.97
ATF4P18848 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC2.72□□□□□ -1.97
ATF4P18848 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC2.72□□□□□ -1.97
ATF4P18848 Y_RNA.23-201ENST00000362496 106 ntBASIC2.72□□□□□ -1.97
ATF4P18848 Y_RNA.111-201ENST00000363248 100 ntBASIC2.72□□□□□ -1.97
ATF4P18848 RNU6-1209P-201ENST00000363655 107 ntBASIC2.72□□□□□ -1.97
ATF4P18848 Y_RNA.796-201ENST00000364268 102 ntBASIC2.72□□□□□ -1.97
ATF4P18848 Y_RNA.265-201ENST00000364677 108 ntBASIC2.72□□□□□ -1.97
ATF4P18848 Y_RNA.799-201ENST00000364992 102 ntBASIC2.72□□□□□ -1.97
ATF4P18848 Y_RNA.357-201ENST00000365487 109 ntBASIC2.72□□□□□ -1.97
ATF4P18848 Y_RNA.412-201ENST00000384001 104 ntBASIC2.72□□□□□ -1.97
ATF4P18848 MIR23A-201ENST00000385245 73 ntBASIC2.72□□□□□ -1.97
ATF4P18848 MT-TT-201ENST00000387460 66 ntBASIC2.72□□□□□ -1.97
ATF4P18848 RNA5SP109-201ENST00000391010 116 ntBASIC2.72□□□□□ -1.97
ATF4P18848 Y_RNA.587-201ENST00000391210 103 ntBASIC2.72□□□□□ -1.97
ATF4P18848 MIR1278-201ENST00000408753 81 ntBASIC2.72□□□□□ -1.97
ATF4P18848 RNA5SP450-201ENST00000411206 102 ntBASIC2.72□□□□□ -1.97
ATF4P18848 AL451074.5-201ENST00000415894 435 ntBASIC2.72□□□□□ -1.97
ATF4P18848 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC2.72□□□□□ -1.97
ATF4P18848 CYCSP4-201ENST00000429682 331 ntBASIC2.72□□□□□ -1.97
ATF4P18848 AC245047.4-201ENST00000433189 144 ntBASIC2.72□□□□□ -1.97
ATF4P18848 AP004217.1-201ENST00000480579 346 ntBASIC2.72□□□□□ -1.97
ATF4P18848 SCARNA8-201ENST00000515924 131 ntBASIC2.72□□□□□ -1.97
ATF4P18848 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC2.72□□□□□ -1.97
ATF4P18848 LINC00508-201ENST00000538901 194 ntTSL 5 BASIC2.72□□□□□ -1.97
ATF4P18848 RPL12P50-201ENST00000603116 116 ntBASIC2.72□□□□□ -1.97
ATF4P18848 AC108706.1-201ENST00000611053 297 ntBASIC2.72□□□□□ -1.97
ATF4P18848 MFSD8-233ENST00000641482 4860 ntBASIC2.72□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 126.8 ms