Protein–RNA interactions for Protein: P17812

CTPS1, CTP synthase 1, humanhuman

Predictions only

Length 591 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTPS1P17812 RNU1-40P-201ENST00000516816 164 ntBASIC2.02□□□□□ -2.09
CTPS1P17812 RNU1-97P-201ENST00000516872 164 ntBASIC2.02□□□□□ -2.09
CTPS1P17812 RNU6-570P-201ENST00000517051 105 ntBASIC2.02□□□□□ -2.09
CTPS1P17812 AC027419.1-201ENST00000522976 328 ntBASIC2.02□□□□□ -2.09
CTPS1P17812 MIR4448-201ENST00000584360 86 ntBASIC2.02□□□□□ -2.09
CTPS1P17812 AC005786.1-201ENST00000588553 154 ntBASIC2.02□□□□□ -2.09
CTPS1P17812 AC006435.5-201ENST00000624486 112 ntBASIC2.02□□□□□ -2.09
CTPS1P17812 SNORD81.1-201ENST00000363064 77 ntBASIC2.01□□□□□ -2.09
CTPS1P17812 RNU6-271P-201ENST00000363858 105 ntBASIC2.01□□□□□ -2.09
CTPS1P17812 RNU6-290P-201ENST00000365212 101 ntBASIC2.01□□□□□ -2.09
CTPS1P17812 Y_RNA.461-201ENST00000384263 103 ntBASIC2.01□□□□□ -2.09
CTPS1P17812 MIR568-201ENST00000385036 95 ntBASIC2.01□□□□□ -2.09
CTPS1P17812 MIR873-201ENST00000401120 77 ntBASIC2.01□□□□□ -2.09
CTPS1P17812 AL356379.1-201ENST00000414105 126 ntBASIC2.01□□□□□ -2.09
CTPS1P17812 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC2.01□□□□□ -2.09
CTPS1P17812 AL121890.1-201ENST00000435457 205 ntBASIC2.01□□□□□ -2.09
CTPS1P17812 POLR2KP2-201ENST00000438155 177 ntBASIC2.01□□□□□ -2.09
CTPS1P17812 RNU6-717P-201ENST00000459076 104 ntBASIC2.01□□□□□ -2.09
CTPS1P17812 MIR514B-201ENST00000516774 80 ntBASIC2.01□□□□□ -2.09
CTPS1P17812 AC092490.2-202ENST00000544922 462 ntTSL 3 BASIC2.01□□□□□ -2.09
CTPS1P17812 MIR5089-201ENST00000580047 84 ntBASIC2.01□□□□□ -2.09
CTPS1P17812 AC127459.3-201ENST00000624328 466 ntBASIC2.01□□□□□ -2.09
CTPS1P17812 MIR338-201ENST00000636369 67 ntBASIC2.01□□□□□ -2.09
CTPS1P17812 SNORA27.1-201ENST00000362604 124 ntBASIC2□□□□□ -2.09
CTPS1P17812 Y_RNA.84-201ENST00000363011 104 ntBASIC2□□□□□ -2.09
CTPS1P17812 RNU6-407P-201ENST00000365280 104 ntBASIC2□□□□□ -2.09
CTPS1P17812 Y_RNA.361-201ENST00000365515 120 ntBASIC2□□□□□ -2.09
CTPS1P17812 Y_RNA.383-201ENST00000383855 97 ntBASIC2□□□□□ -2.09
CTPS1P17812 RNU6-196P-201ENST00000384315 107 ntBASIC2□□□□□ -2.09
CTPS1P17812 Y_RNA.541-201ENST00000384640 113 ntBASIC2□□□□□ -2.09
CTPS1P17812 RNU6-417P-201ENST00000384712 107 ntBASIC2□□□□□ -2.09
CTPS1P17812 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC2□□□□□ -2.09
CTPS1P17812 RNU6ATAC38P-201ENST00000408119 126 ntBASIC2□□□□□ -2.09
CTPS1P17812 MIR1302-6-201ENST00000408466 90 ntBASIC2□□□□□ -2.09
CTPS1P17812 TRAPPC2P7-201ENST00000509650 231 ntBASIC2□□□□□ -2.09
CTPS1P17812 AL137100.2-201ENST00000555786 315 ntBASIC2□□□□□ -2.09
CTPS1P17812 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC2□□□□□ -2.09
CTPS1P17812 AC022513.1-201ENST00000624512 117 ntBASIC2□□□□□ -2.09
CTPS1P17812 U6.104-201ENST00000637979 90 ntBASIC2□□□□□ -2.09
CTPS1P17812 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC2□□□□□ -2.09
CTPS1P17812 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC2□□□□□ -2.09
CTPS1P17812 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC1.99□□□□□ -2.09
CTPS1P17812 Y_RNA.124-201ENST00000363339 93 ntBASIC1.99□□□□□ -2.09
CTPS1P17812 Y_RNA.144-201ENST00000363521 113 ntBASIC1.99□□□□□ -2.09
CTPS1P17812 Y_RNA.287-201ENST00000364853 94 ntBASIC1.99□□□□□ -2.09
CTPS1P17812 Y_RNA.329-201ENST00000365209 107 ntBASIC1.99□□□□□ -2.09
CTPS1P17812 Y_RNA.376-201ENST00000365638 108 ntBASIC1.99□□□□□ -2.09
CTPS1P17812 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC1.99□□□□□ -2.09
CTPS1P17812 AL117342.1-201ENST00000404861 406 ntBASIC1.99□□□□□ -2.09
CTPS1P17812 RNU6-1203P-201ENST00000410703 110 ntBASIC1.99□□□□□ -2.09
CTPS1P17812 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC1.99□□□□□ -2.09
CTPS1P17812 TRBVB-201ENST00000477100 408 ntBASIC1.99□□□□□ -2.09
CTPS1P17812 RPS27P22-201ENST00000478056 241 ntBASIC1.99□□□□□ -2.09
CTPS1P17812 RPS27P21-201ENST00000486977 252 ntBASIC1.99□□□□□ -2.09
CTPS1P17812 SNORA70.12-201ENST00000516084 153 ntBASIC1.99□□□□□ -2.09
CTPS1P17812 RNU6-436P-201ENST00000516171 114 ntBASIC1.99□□□□□ -2.09
CTPS1P17812 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC1.99□□□□□ -2.09
CTPS1P17812 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC1.99□□□□□ -2.09
CTPS1P17812 AC023157.2-201ENST00000540596 141 ntBASIC1.99□□□□□ -2.09
CTPS1P17812 AC104984.5-201ENST00000586878 94 ntBASIC1.99□□□□□ -2.09
CTPS1P17812 CENPCP1-201ENST00000533085 2578 ntBASIC1.99□□□□□ -2.09
CTPS1P17812 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC1.98□□□□□ -2.09
CTPS1P17812 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC1.98□□□□□ -2.09
CTPS1P17812 SNORD114-7-201ENST00000362520 77 ntBASIC1.98□□□□□ -2.09
CTPS1P17812 SNORD114-1-201ENST00000362705 72 ntBASIC1.98□□□□□ -2.09
CTPS1P17812 RNU6-862P-201ENST00000362804 105 ntBASIC1.98□□□□□ -2.09
CTPS1P17812 Y_RNA.396-201ENST00000383949 103 ntBASIC1.98□□□□□ -2.09
CTPS1P17812 Y_RNA.569-201ENST00000384749 103 ntBASIC1.98□□□□□ -2.09
CTPS1P17812 RNU2-40P-201ENST00000410833 196 ntBASIC1.98□□□□□ -2.09
CTPS1P17812 RNA5SP501-201ENST00000410990 112 ntBASIC1.98□□□□□ -2.09
CTPS1P17812 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC1.98□□□□□ -2.09
CTPS1P17812 MRPS10P1-201ENST00000448483 130 ntBASIC1.98□□□□□ -2.09
CTPS1P17812 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC1.98□□□□□ -2.09
CTPS1P17812 AL161670.1-201ENST00000554348 137 ntBASIC1.98□□□□□ -2.09
CTPS1P17812 MIR4438-201ENST00000585271 93 ntBASIC1.98□□□□□ -2.09
CTPS1P17812 DEFB117-201ENST00000602356 141 ntBASIC1.98□□□□□ -2.09
CTPS1P17812 AC037487.3-201ENST00000606668 112 ntBASIC1.98□□□□□ -2.09
CTPS1P17812 5S_rRNA.11-201ENST00000618635 84 ntBASIC1.98□□□□□ -2.09
CTPS1P17812 7SK.10-201ENST00000621414 298 ntBASIC1.98□□□□□ -2.09
CTPS1P17812 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC1.98□□□□□ -2.09
CTPS1P17812 AC008555.8-201ENST00000623602 2168 ntBASIC1.98□□□□□ -2.09
CTPS1P17812 AC010615.1-201ENST00000594254 1764 ntBASIC1.98□□□□□ -2.09
CTPS1P17812 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC1.97□□□□□ -2.09
CTPS1P17812 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC1.97□□□□□ -2.09
CTPS1P17812 Y_RNA.16-201ENST00000362421 102 ntBASIC1.97□□□□□ -2.09
CTPS1P17812 RNU1-96P-201ENST00000364163 162 ntBASIC1.97□□□□□ -2.09
CTPS1P17812 RNU6-472P-201ENST00000384299 107 ntBASIC1.97□□□□□ -2.09
CTPS1P17812 RNU6-463P-201ENST00000384340 107 ntBASIC1.97□□□□□ -2.09
CTPS1P17812 Y_RNA.483-201ENST00000384380 101 ntBASIC1.97□□□□□ -2.09
CTPS1P17812 RNU6-505P-201ENST00000384427 107 ntBASIC1.97□□□□□ -2.09
CTPS1P17812 Y_RNA.556-201ENST00000384677 113 ntBASIC1.97□□□□□ -2.09
CTPS1P17812 MIR515-2-201ENST00000384883 83 ntBASIC1.97□□□□□ -2.09
CTPS1P17812 MIR515-1-201ENST00000384884 83 ntBASIC1.97□□□□□ -2.09
CTPS1P17812 MT-TW-201ENST00000387382 68 ntBASIC1.97□□□□□ -2.09
CTPS1P17812 SNORA53-201ENST00000391141 249 ntBASIC1.97□□□□□ -2.09
CTPS1P17812 RNU2-61P-201ENST00000411069 191 ntBASIC1.97□□□□□ -2.09
CTPS1P17812 AL158823.1-201ENST00000418441 478 ntBASIC1.97□□□□□ -2.09
CTPS1P17812 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC1.97□□□□□ -2.09
CTPS1P17812 CST2P1-201ENST00000425770 87 ntBASIC1.97□□□□□ -2.09
CTPS1P17812 AC099677.2-201ENST00000436385 175 ntBASIC1.97□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 106.1 ms