Protein–RNA interactions for Protein: P12111

COL6A3, Collagen alpha-3(VI) chain, humanhuman

Predictions only

Length 3,177 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A3P12111 ZNF736P4Y-201ENST00000454995 1243 ntBASIC-0.46□□□□□ -2.48
COL6A3P12111 AC079760.1-201ENST00000456952 202 ntTSL 3 BASIC-0.46□□□□□ -2.48
COL6A3P12111 AC093899.1-201ENST00000457984 376 ntBASIC-0.46□□□□□ -2.48
COL6A3P12111 RPL39P36-201ENST00000490784 156 ntBASIC-0.46□□□□□ -2.48
COL6A3P12111 AC016632.1-201ENST00000503994 196 ntBASIC-0.46□□□□□ -2.48
COL6A3P12111 AC046134.1-201ENST00000514454 666 ntBASIC-0.46□□□□□ -2.48
COL6A3P12111 RNU7-99P-201ENST00000516271 62 ntBASIC-0.46□□□□□ -2.48
COL6A3P12111 RNU7-43P-201ENST00000516554 64 ntBASIC-0.46□□□□□ -2.48
COL6A3P12111 RNU6-1007P-201ENST00000516586 107 ntBASIC-0.46□□□□□ -2.48
COL6A3P12111 RNU6-856P-201ENST00000516959 98 ntBASIC-0.46□□□□□ -2.48
COL6A3P12111 MTND1P36-201ENST00000522384 936 ntBASIC-0.46□□□□□ -2.48
COL6A3P12111 NUCB2-220ENST00000622082 1369 ntAPPRIS P2 TSL 5 BASIC-0.46□□□□□ -2.48
COL6A3P12111 MIR148A-201ENST00000362215 68 ntBASIC-0.46□□□□□ -2.48
COL6A3P12111 Y_RNA.56-201ENST00000362798 112 ntBASIC-0.46□□□□□ -2.48
COL6A3P12111 U3.4-201ENST00000363352 213 ntBASIC-0.46□□□□□ -2.48
COL6A3P12111 Y_RNA.371-201ENST00000365591 113 ntBASIC-0.46□□□□□ -2.48
COL6A3P12111 AL355143.1-201ENST00000407101 841 ntBASIC-0.46□□□□□ -2.48
COL6A3P12111 Y_RNA.715-201ENST00000517082 110 ntBASIC-0.46□□□□□ -2.48
COL6A3P12111 AC103996.1-201ENST00000555468 102 ntBASIC-0.46□□□□□ -2.48
COL6A3P12111 SNORD92-201ENST00000585078 85 ntBASIC-0.46□□□□□ -2.48
COL6A3P12111 AC125232.2-201ENST00000592457 143 ntBASIC-0.46□□□□□ -2.48
COL6A3P12111 AC120024.3-201ENST00000603167 156 ntBASIC-0.46□□□□□ -2.48
COL6A3P12111 AP000753.3-201ENST00000604083 169 ntBASIC-0.46□□□□□ -2.48
COL6A3P12111 AC009994.1-201ENST00000606889 253 ntBASIC-0.46□□□□□ -2.48
COL6A3P12111 AC010999.1-201ENST00000611856 324 ntBASIC-0.46□□□□□ -2.48
COL6A3P12111 TUG1_4.1-201ENST00000619464 181 ntBASIC-0.46□□□□□ -2.48
COL6A3P12111 RNU6-428P-201ENST00000362942 107 ntBASIC-0.47□□□□□ -2.48
COL6A3P12111 RNU6-252P-201ENST00000363232 107 ntBASIC-0.47□□□□□ -2.48
COL6A3P12111 RNU6-853P-201ENST00000364306 107 ntBASIC-0.47□□□□□ -2.48
COL6A3P12111 Y_RNA.397-201ENST00000383950 98 ntBASIC-0.47□□□□□ -2.48
COL6A3P12111 MT-TY-201ENST00000387409 66 ntBASIC-0.47□□□□□ -2.48
COL6A3P12111 RNU6-564P-201ENST00000410983 104 ntBASIC-0.47□□□□□ -2.48
COL6A3P12111 SUMO1P3-201ENST00000439961 304 ntBASIC-0.47□□□□□ -2.48
COL6A3P12111 RNU7-62P-201ENST00000458856 62 ntBASIC-0.47□□□□□ -2.48
COL6A3P12111 RNU6-377P-201ENST00000515965 102 ntBASIC-0.47□□□□□ -2.48
COL6A3P12111 SNORA31.3-201ENST00000516029 96 ntBASIC-0.47□□□□□ -2.48
COL6A3P12111 Y_RNA.687-201ENST00000516558 91 ntBASIC-0.47□□□□□ -2.48
COL6A3P12111 SNORA31.14-201ENST00000516728 116 ntBASIC-0.47□□□□□ -2.48
COL6A3P12111 AL512347.1-201ENST00000566420 503 ntBASIC-0.47□□□□□ -2.48
COL6A3P12111 MIR4676-201ENST00000583078 72 ntBASIC-0.47□□□□□ -2.48
COL6A3P12111 AC134878.1-201ENST00000619901 243 ntBASIC-0.47□□□□□ -2.48
COL6A3P12111 RNU6-216P-201ENST00000363282 104 ntBASIC-0.47□□□□□ -2.48
COL6A3P12111 RNU6-727P-201ENST00000363592 107 ntBASIC-0.47□□□□□ -2.48
COL6A3P12111 RNU6-137P-201ENST00000363680 108 ntBASIC-0.47□□□□□ -2.48
COL6A3P12111 Y_RNA.284-201ENST00000364806 102 ntBASIC-0.47□□□□□ -2.48
COL6A3P12111 U8.6-201ENST00000364939 135 ntBASIC-0.47□□□□□ -2.48
COL6A3P12111 MIR513C-201ENST00000401352 84 ntBASIC-0.47□□□□□ -2.48
COL6A3P12111 MRPL42P3-201ENST00000401492 326 ntBASIC-0.47□□□□□ -2.48
COL6A3P12111 MTCYBP2-201ENST00000407745 171 ntBASIC-0.47□□□□□ -2.48
COL6A3P12111 RNA5SP201-201ENST00000410316 124 ntBASIC-0.47□□□□□ -2.48
COL6A3P12111 AC004866.1-201ENST00000411748 78 ntBASIC-0.47□□□□□ -2.48
COL6A3P12111 AC004543.1-201ENST00000418764 369 ntTSL 5 BASIC-0.47□□□□□ -2.48
COL6A3P12111 CALM2P4-201ENST00000430810 426 ntBASIC-0.47□□□□□ -2.48
COL6A3P12111 RPL39P25-201ENST00000449384 154 ntBASIC-0.47□□□□□ -2.48
COL6A3P12111 AL355314.1-201ENST00000453639 316 ntTSL 5 BASIC-0.47□□□□□ -2.48
COL6A3P12111 RNU7-57P-201ENST00000459540 60 ntBASIC-0.47□□□□□ -2.48
COL6A3P12111 AP003168.1-201ENST00000530091 307 ntBASIC-0.47□□□□□ -2.48
COL6A3P12111 AC090617.3-201ENST00000573670 475 ntBASIC-0.47□□□□□ -2.48
COL6A3P12111 AC008752.3-201ENST00000588113 712 ntBASIC-0.47□□□□□ -2.48
COL6A3P12111 OR4H6P-202ENST00000603819 340 ntBASIC-0.47□□□□□ -2.48
COL6A3P12111 AL022154.1-201ENST00000604698 785 ntBASIC-0.47□□□□□ -2.48
COL6A3P12111 CYP19A1-220ENST00000613097 123 ntTSL 5 BASIC-0.47□□□□□ -2.48
COL6A3P12111 AL445264.1-201ENST00000621719 171 ntBASIC-0.47□□□□□ -2.48
COL6A3P12111 RNU6-1285P-201ENST00000363480 105 ntBASIC-0.47□□□□□ -2.49
COL6A3P12111 RNU6-1244P-201ENST00000363614 108 ntBASIC-0.47□□□□□ -2.49
COL6A3P12111 RNU6-1284P-201ENST00000363701 100 ntBASIC-0.47□□□□□ -2.49
COL6A3P12111 BTBD7P2-201ENST00000441962 620 ntBASIC-0.47□□□□□ -2.49
COL6A3P12111 AC079781.2-201ENST00000446424 169 ntBASIC-0.47□□□□□ -2.49
COL6A3P12111 MIR18B-201ENST00000454574 71 ntBASIC-0.47□□□□□ -2.49
COL6A3P12111 AC092264.1-201ENST00000456002 713 ntTSL 5 BASIC-0.47□□□□□ -2.49
COL6A3P12111 AL157373.1-201ENST00000456036 276 ntTSL 3 BASIC-0.47□□□□□ -2.49
COL6A3P12111 RNU6-135P-201ENST00000516769 101 ntBASIC-0.47□□□□□ -2.49
COL6A3P12111 RNU2-56P-201ENST00000516826 190 ntBASIC-0.47□□□□□ -2.49
COL6A3P12111 RNU6-1315P-201ENST00000517187 99 ntBASIC-0.47□□□□□ -2.49
COL6A3P12111 AL133153.1-201ENST00000557756 303 ntBASIC-0.47□□□□□ -2.49
COL6A3P12111 AP001033.2-201ENST00000609701 1003 ntBASIC-0.47□□□□□ -2.49
COL6A3P12111 AL589935.1-202ENST00000612512 393 ntTSL 5 BASIC-0.47□□□□□ -2.49
COL6A3P12111 AL442067.1-201ENST00000613261 223 ntBASIC-0.47□□□□□ -2.49
COL6A3P12111 AL354696.1-201ENST00000614652 497 ntBASIC-0.47□□□□□ -2.49
COL6A3P12111 AC026585.1-201ENST00000619582 524 ntBASIC-0.47□□□□□ -2.49
COL6A3P12111 RNU6-97P-201ENST00000363387 104 ntBASIC-0.48□□□□□ -2.49
COL6A3P12111 SNORA63C-201ENST00000364578 129 ntBASIC-0.48□□□□□ -2.49
COL6A3P12111 SNORA67.2-201ENST00000384300 149 ntBASIC-0.48□□□□□ -2.49
COL6A3P12111 MTCO1P17-201ENST00000411522 491 ntBASIC-0.48□□□□□ -2.49
COL6A3P12111 HSFY7P-201ENST00000432672 318 ntBASIC-0.48□□□□□ -2.49
COL6A3P12111 HSFY8P-201ENST00000437934 318 ntBASIC-0.48□□□□□ -2.49
COL6A3P12111 RNU7-156P-201ENST00000517214 74 ntBASIC-0.48□□□□□ -2.49
COL6A3P12111 AP001372.4-201ENST00000524889 472 ntBASIC-0.48□□□□□ -2.49
COL6A3P12111 AL138889.2-201ENST00000603883 242 ntBASIC-0.48□□□□□ -2.49
COL6A3P12111 MTND5P42-201ENST00000637720 498 ntBASIC-0.48□□□□□ -2.49
COL6A3P12111 MIR101-2-201ENST00000362195 79 ntBASIC-0.48□□□□□ -2.49
COL6A3P12111 RNU6-552P-201ENST00000362869 119 ntBASIC-0.48□□□□□ -2.49
COL6A3P12111 RNU6-839P-201ENST00000363347 108 ntBASIC-0.48□□□□□ -2.49
COL6A3P12111 RNU6-424P-201ENST00000384367 105 ntBASIC-0.48□□□□□ -2.49
COL6A3P12111 RNU6-125P-201ENST00000384505 107 ntBASIC-0.48□□□□□ -2.49
COL6A3P12111 MIR7-1-201ENST00000384871 110 ntBASIC-0.48□□□□□ -2.49
COL6A3P12111 AC244250.2-201ENST00000418731 148 ntBASIC-0.48□□□□□ -2.49
COL6A3P12111 C5orf58-201ENST00000421269 406 ntAPPRIS ALT2 TSL 2 BASIC-0.48□□□□□ -2.49
COL6A3P12111 COX7BP2-201ENST00000437976 242 ntBASIC-0.48□□□□□ -2.49
COL6A3P12111 MTND1P31-201ENST00000449206 961 ntBASIC-0.48□□□□□ -2.49
Retrieved 100 of 98,524 protein–RNA pairs in 103.1 ms