Protein–RNA interactions for Protein: P09016

HOXD4, Homeobox protein Hox-D4, humanhuman

Predicted RBP Predictions only

Length 255 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD4P09016 SNORA40.15-201ENST00000516884 107 ntBASIC1.63□□□□□ -2.15
HOXD4P09016 Y_RNA.713-201ENST00000517013 96 ntBASIC1.63□□□□□ -2.15
HOXD4P09016 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC1.63□□□□□ -2.15
HOXD4P09016 MIR4299-201ENST00000577899 72 ntBASIC1.63□□□□□ -2.15
HOXD4P09016 MIR4423-201ENST00000580922 80 ntBASIC1.63□□□□□ -2.15
HOXD4P09016 MIR4300-201ENST00000581016 96 ntBASIC1.63□□□□□ -2.15
HOXD4P09016 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC1.63□□□□□ -2.15
HOXD4P09016 AC005176.2-201ENST00000596933 147 ntBASIC1.63□□□□□ -2.15
HOXD4P09016 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC1.63□□□□□ -2.15
HOXD4P09016 snoZ196.1-201ENST00000625269 89 ntBASIC1.63□□□□□ -2.15
HOXD4P09016 RNA5SP276-201ENST00000362580 94 ntBASIC1.62□□□□□ -2.15
HOXD4P09016 Y_RNA.101-201ENST00000363154 102 ntBASIC1.62□□□□□ -2.15
HOXD4P09016 Y_RNA.152-201ENST00000363578 100 ntBASIC1.62□□□□□ -2.15
HOXD4P09016 RNU6-454P-201ENST00000364292 107 ntBASIC1.62□□□□□ -2.15
HOXD4P09016 SNORD114-6-201ENST00000364393 72 ntBASIC1.62□□□□□ -2.15
HOXD4P09016 RNU6-1164P-201ENST00000364428 107 ntBASIC1.62□□□□□ -2.15
HOXD4P09016 Y_RNA.570-201ENST00000384750 101 ntBASIC1.62□□□□□ -2.15
HOXD4P09016 RNU6-1105P-201ENST00000384774 107 ntBASIC1.62□□□□□ -2.15
HOXD4P09016 snosnR66.1-201ENST00000391095 99 ntBASIC1.62□□□□□ -2.15
HOXD4P09016 MIR1287-201ENST00000408492 90 ntBASIC1.62□□□□□ -2.15
HOXD4P09016 MIR1185-2-201ENST00000408687 86 ntBASIC1.62□□□□□ -2.15
HOXD4P09016 BTF3P4-201ENST00000418852 495 ntBASIC1.62□□□□□ -2.15
HOXD4P09016 AC073323.1-201ENST00000419832 451 ntTSL 2 BASIC1.62□□□□□ -2.15
HOXD4P09016 AC003989.2-201ENST00000440224 169 ntBASIC1.62□□□□□ -2.15
HOXD4P09016 AC074290.1-201ENST00000448883 135 ntBASIC1.62□□□□□ -2.15
HOXD4P09016 HMGN1P10-201ENST00000474557 553 ntBASIC1.62□□□□□ -2.15
HOXD4P09016 RNU6-635P-201ENST00000516651 102 ntBASIC1.62□□□□□ -2.15
HOXD4P09016 RNU6-250P-201ENST00000516958 103 ntBASIC1.62□□□□□ -2.15
HOXD4P09016 AC087441.2-201ENST00000529141 262 ntBASIC1.62□□□□□ -2.15
HOXD4P09016 AC008269.2-201ENST00000561915 1105 ntBASIC1.62□□□□□ -2.15
HOXD4P09016 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC1.62□□□□□ -2.15
HOXD4P09016 SNRPGP19-201ENST00000603826 189 ntBASIC1.62□□□□□ -2.15
HOXD4P09016 MIR502-201ENST00000606349 86 ntBASIC1.62□□□□□ -2.15
HOXD4P09016 AL773524.1-201ENST00000614065 229 ntBASIC1.62□□□□□ -2.15
HOXD4P09016 AC004467.1-201ENST00000615678 330 ntBASIC1.62□□□□□ -2.15
HOXD4P09016 Six3os1_7.1-201ENST00000621512 201 ntBASIC1.62□□□□□ -2.15
HOXD4P09016 AC130454.1-201ENST00000622948 401 ntBASIC1.62□□□□□ -2.15
HOXD4P09016 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC1.62□□□□□ -2.15
HOXD4P09016 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC1.62□□□□□ -2.15
HOXD4P09016 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC1.61□□□□□ -2.15
HOXD4P09016 LINC02555-201ENST00000563933 1951 ntBASIC1.61□□□□□ -2.15
HOXD4P09016 Y_RNA.19-201ENST00000362462 99 ntBASIC1.61□□□□□ -2.15
HOXD4P09016 Y_RNA.64-201ENST00000362845 102 ntBASIC1.61□□□□□ -2.15
HOXD4P09016 Y_RNA.133-201ENST00000363428 110 ntBASIC1.61□□□□□ -2.15
HOXD4P09016 RNU6-770P-201ENST00000363929 105 ntBASIC1.61□□□□□ -2.15
HOXD4P09016 Y_RNA.230-201ENST00000364348 109 ntBASIC1.61□□□□□ -2.15
HOXD4P09016 Y_RNA.512-201ENST00000384518 102 ntBASIC1.61□□□□□ -2.15
HOXD4P09016 SNORA8-201ENST00000384574 139 ntBASIC1.61□□□□□ -2.15
HOXD4P09016 MIR9-3-201ENST00000385084 90 ntBASIC1.61□□□□□ -2.15
HOXD4P09016 RNU6-1109P-201ENST00000391187 107 ntBASIC1.61□□□□□ -2.15
HOXD4P09016 AL627390.1-201ENST00000396055 340 ntBASIC1.61□□□□□ -2.15
HOXD4P09016 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC1.61□□□□□ -2.15
HOXD4P09016 AC016909.1-201ENST00000415916 166 ntBASIC1.61□□□□□ -2.15
HOXD4P09016 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC1.61□□□□□ -2.15
HOXD4P09016 AC244636.1-201ENST00000421152 228 ntBASIC1.61□□□□□ -2.15
HOXD4P09016 AL357134.1-201ENST00000445848 426 ntBASIC1.61□□□□□ -2.15
HOXD4P09016 RPL23AP6-201ENST00000446637 472 ntBASIC1.61□□□□□ -2.15
HOXD4P09016 LINC01399-202ENST00000458450 244 ntBASIC1.61□□□□□ -2.15
HOXD4P09016 RNU6-221P-201ENST00000459541 99 ntBASIC1.61□□□□□ -2.15
HOXD4P09016 AC025465.3-201ENST00000510570 311 ntBASIC1.61□□□□□ -2.15
HOXD4P09016 RNY3P15-201ENST00000516297 97 ntBASIC1.61□□□□□ -2.15
HOXD4P09016 RNU6-948P-201ENST00000516374 107 ntBASIC1.61□□□□□ -2.15
HOXD4P09016 RNU2-34P-201ENST00000516534 121 ntBASIC1.61□□□□□ -2.15
HOXD4P09016 RNU6-856P-201ENST00000516959 98 ntBASIC1.61□□□□□ -2.15
HOXD4P09016 AC024614.2-201ENST00000577584 372 ntBASIC1.61□□□□□ -2.15
HOXD4P09016 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC1.61□□□□□ -2.15
HOXD4P09016 MIR376A1-201ENST00000616574 68 ntBASIC1.61□□□□□ -2.15
HOXD4P09016 AL590240.4-201ENST00000616908 390 ntBASIC1.61□□□□□ -2.15
HOXD4P09016 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC1.6□□□□□ -2.15
HOXD4P09016 RNU1-58P-201ENST00000362413 163 ntBASIC1.6□□□□□ -2.15
HOXD4P09016 RNU6-238P-201ENST00000363313 106 ntBASIC1.6□□□□□ -2.15
HOXD4P09016 Y_RNA.222-201ENST00000364264 102 ntBASIC1.6□□□□□ -2.15
HOXD4P09016 SNORA16.1-201ENST00000364597 132 ntBASIC1.6□□□□□ -2.15
HOXD4P09016 SNORA72.2-201ENST00000365028 127 ntBASIC1.6□□□□□ -2.15
HOXD4P09016 RNU6-1175P-201ENST00000365200 107 ntBASIC1.6□□□□□ -2.15
HOXD4P09016 RNU6-1310P-201ENST00000384153 107 ntBASIC1.6□□□□□ -2.15
HOXD4P09016 SNORD63-201ENST00000384262 68 ntBASIC1.6□□□□□ -2.15
HOXD4P09016 Y_RNA.462-201ENST00000384268 102 ntBASIC1.6□□□□□ -2.15
HOXD4P09016 RNU6-160P-201ENST00000384591 107 ntBASIC1.6□□□□□ -2.15
HOXD4P09016 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC1.6□□□□□ -2.15
HOXD4P09016 RNA5SP212-201ENST00000391223 107 ntBASIC1.6□□□□□ -2.15
HOXD4P09016 RNA5SP475-201ENST00000410568 110 ntBASIC1.6□□□□□ -2.15
HOXD4P09016 RNU6-321P-201ENST00000410912 106 ntBASIC1.6□□□□□ -2.15
HOXD4P09016 RPL21P38-201ENST00000418090 167 ntBASIC1.6□□□□□ -2.15
HOXD4P09016 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC1.6□□□□□ -2.15
HOXD4P09016 AL731563.1-201ENST00000442202 214 ntBASIC1.6□□□□□ -2.15
HOXD4P09016 DYNLT3P2-201ENST00000442517 295 ntBASIC1.6□□□□□ -2.15
HOXD4P09016 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC1.6□□□□□ -2.15
HOXD4P09016 RNU2-12P-201ENST00000517216 168 ntBASIC1.6□□□□□ -2.15
HOXD4P09016 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC1.6□□□□□ -2.15
HOXD4P09016 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC1.6□□□□□ -2.15
HOXD4P09016 PRR13P7-201ENST00000605538 430 ntBASIC1.6□□□□□ -2.15
HOXD4P09016 AL162730.1-201ENST00000605734 292 ntBASIC1.6□□□□□ -2.15
HOXD4P09016 U1.36-201ENST00000620684 176 ntBASIC1.6□□□□□ -2.15
HOXD4P09016 AC006001.4-201ENST00000622243 395 ntBASIC1.6□□□□□ -2.15
HOXD4P09016 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC1.6□□□□□ -2.15
HOXD4P09016 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC1.59□□□□□ -2.15
HOXD4P09016 RNU6-102P-201ENST00000384485 104 ntBASIC1.59□□□□□ -2.15
HOXD4P09016 Y_RNA.574-201ENST00000384766 95 ntBASIC1.59□□□□□ -2.15
HOXD4P09016 SNORD115-46-201ENST00000390982 71 ntBASIC1.59□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 148.5 ms