Protein–RNA interactions for Protein: O43707

ACTN4, Alpha-actinin-4, humanhuman

Known RBP Predictions only

Length 911 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4O43707 PRRG1-202ENST00000449135 4481 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
ACTN4O43707 CLHC1-201ENST00000401408 2248 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
ACTN4O43707 PCLO-206ENST00000437081 3786 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
ACTN4O43707 KIF21A-203ENST00000541463 4866 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
ACTN4O43707 OR56A3-203ENST00000641160 4438 ntAPPRIS P1 BASIC4.01□□□□□ -1.77
ACTN4O43707 MCF2-210ENST00000536274 3461 ntAPPRIS ALT2 TSL 2 BASIC4.01□□□□□ -1.77
ACTN4O43707 RNA5SP51-201ENST00000364750 119 ntBASIC4.01□□□□□ -1.77
ACTN4O43707 HSPE1P26-201ENST00000405341 275 ntBASIC4.01□□□□□ -1.77
ACTN4O43707 FTH1P12-201ENST00000432137 551 ntBASIC4.01□□□□□ -1.77
ACTN4O43707 AC113410.1-201ENST00000505029 247 ntBASIC4.01□□□□□ -1.77
ACTN4O43707 RNU6-795P-201ENST00000516323 103 ntBASIC4.01□□□□□ -1.77
ACTN4O43707 RNU7-25P-201ENST00000516544 62 ntBASIC4.01□□□□□ -1.77
ACTN4O43707 RNU6-856P-201ENST00000516959 98 ntBASIC4.01□□□□□ -1.77
ACTN4O43707 RNU6-341P-201ENST00000516973 96 ntBASIC4.01□□□□□ -1.77
ACTN4O43707 AC026333.2-201ENST00000542164 106 ntBASIC4.01□□□□□ -1.77
ACTN4O43707 MIR4778-201ENST00000577635 80 ntBASIC4.01□□□□□ -1.77
ACTN4O43707 MIR3160-1-201ENST00000577972 85 ntBASIC4.01□□□□□ -1.77
ACTN4O43707 MIR3683-201ENST00000580847 82 ntBASIC4.01□□□□□ -1.77
ACTN4O43707 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC4.01□□□□□ -1.77
ACTN4O43707 ADGRL2-207ENST00000370723 5254 ntTSL 5 BASIC4.01□□□□□ -1.77
ACTN4O43707 DOCK7-204ENST00000454575 6985 ntAPPRIS ALT2 TSL 1 (best) BASIC4.01□□□□□ -1.77
ACTN4O43707 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC4□□□□□ -1.77
ACTN4O43707 TFEC-201ENST00000265440 6628 ntTSL 1 (best) BASIC4□□□□□ -1.77
ACTN4O43707 KCNJ16-203ENST00000392671 3981 ntAPPRIS P1 TSL 2 BASIC4□□□□□ -1.77
ACTN4O43707 GPRC6A-202ENST00000368549 2622 ntTSL 1 (best) BASIC4□□□□□ -1.77
ACTN4O43707 FER-201ENST00000281092 12119 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
ACTN4O43707 RNU1-105P-201ENST00000363470 161 ntBASIC4□□□□□ -1.77
ACTN4O43707 MIR522-201ENST00000385071 87 ntBASIC4□□□□□ -1.77
ACTN4O43707 RNU6-279P-201ENST00000391297 101 ntBASIC4□□□□□ -1.77
ACTN4O43707 PVALB-202ENST00000404171 422 ntTSL 2 BASIC4□□□□□ -1.77
ACTN4O43707 AC004941.2-201ENST00000427009 228 ntBASIC4□□□□□ -1.77
ACTN4O43707 AC244505.4-201ENST00000434905 287 ntBASIC4□□□□□ -1.77
ACTN4O43707 AC099677.2-201ENST00000436385 175 ntBASIC4□□□□□ -1.77
ACTN4O43707 SSXP5-201ENST00000443473 287 ntBASIC4□□□□□ -1.77
ACTN4O43707 HMGN2P7-201ENST00000456186 273 ntBASIC4□□□□□ -1.77
ACTN4O43707 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC4□□□□□ -1.77
ACTN4O43707 RNU2-35P-201ENST00000516446 142 ntBASIC4□□□□□ -1.77
ACTN4O43707 AL358944.1-201ENST00000528537 144 ntBASIC4□□□□□ -1.77
ACTN4O43707 DLEU2_5.2-201ENST00000610606 84 ntBASIC4□□□□□ -1.77
ACTN4O43707 RNVU1-4-201ENST00000612985 164 ntBASIC4□□□□□ -1.77
ACTN4O43707 AC012531.4-201ENST00000616509 177 ntBASIC4□□□□□ -1.77
ACTN4O43707 MIR6079-201ENST00000635807 62 ntBASIC4□□□□□ -1.77
ACTN4O43707 FIGNL1-203ENST00000419119 3700 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
ACTN4O43707 NUFIP2-201ENST00000225388 10850 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
ACTN4O43707 AC093908.1-201ENST00000623125 8092 ntBASIC3.99□□□□□ -1.77
ACTN4O43707 PTPN22-207ENST00000528414 3424 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
ACTN4O43707 CCDC141-202ENST00000409284 6960 ntAPPRIS P2 TSL 1 (best) BASIC3.99□□□□□ -1.77
ACTN4O43707 ZNF804B-202ENST00000611114 3968 ntTSL 5 BASIC3.99□□□□□ -1.77
ACTN4O43707 RNU6-1125P-201ENST00000363601 107 ntBASIC3.99□□□□□ -1.77
ACTN4O43707 Y_RNA.155-201ENST00000363632 101 ntBASIC3.99□□□□□ -1.77
ACTN4O43707 RNA5SP479-201ENST00000364858 117 ntBASIC3.99□□□□□ -1.77
ACTN4O43707 RNU6-442P-201ENST00000383968 104 ntBASIC3.99□□□□□ -1.77
ACTN4O43707 LINC02337-201ENST00000401043 374 ntTSL 3 BASIC3.99□□□□□ -1.77
ACTN4O43707 AL451046.2-201ENST00000403074 277 ntBASIC3.99□□□□□ -1.77
ACTN4O43707 MIR1193-201ENST00000408109 78 ntBASIC3.99□□□□□ -1.77
ACTN4O43707 RNU6-938P-201ENST00000411285 103 ntBASIC3.99□□□□□ -1.77
ACTN4O43707 AC068295.1-201ENST00000413056 153 ntTSL 3 BASIC3.99□□□□□ -1.77
ACTN4O43707 RN7SL594P-201ENST00000470590 287 ntBASIC3.99□□□□□ -1.77
ACTN4O43707 SNORA70.18-201ENST00000516696 98 ntBASIC3.99□□□□□ -1.77
ACTN4O43707 SNORD36C-201ENST00000516733 66 ntBASIC3.99□□□□□ -1.77
ACTN4O43707 AC091544.4-201ENST00000555268 342 ntBASIC3.99□□□□□ -1.77
ACTN4O43707 MIR5047-201ENST00000579212 100 ntBASIC3.99□□□□□ -1.77
ACTN4O43707 AC012531.5-201ENST00000611375 151 ntBASIC3.99□□□□□ -1.77
ACTN4O43707 AC006441.5-201ENST00000612680 209 ntBASIC3.99□□□□□ -1.77
ACTN4O43707 Xist_exon1.1-201ENST00000618930 85 ntBASIC3.99□□□□□ -1.77
ACTN4O43707 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC3.99□□□□□ -1.77
ACTN4O43707 hsa-mir-4776-1.1-201ENST00000636364 80 ntBASIC3.99□□□□□ -1.77
ACTN4O43707 Clostridiales-1.3-201ENST00000637703 147 ntBASIC3.99□□□□□ -1.77
ACTN4O43707 GEN1-201ENST00000317402 9854 ntAPPRIS P1 TSL 2 BASIC3.99□□□□□ -1.77
ACTN4O43707 CENPJ-205ENST00000545981 4299 ntTSL 2 BASIC3.98□□□□□ -1.77
ACTN4O43707 ADAM28-201ENST00000265769 7052 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
ACTN4O43707 PCAT4-201ENST00000504263 2091 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
ACTN4O43707 SNORD9-201ENST00000362566 104 ntBASIC3.98□□□□□ -1.77
ACTN4O43707 RNU6-170P-201ENST00000362832 104 ntBASIC3.98□□□□□ -1.77
ACTN4O43707 RNU6-743P-201ENST00000364151 106 ntBASIC3.98□□□□□ -1.77
ACTN4O43707 Y_RNA.351-201ENST00000365436 96 ntBASIC3.98□□□□□ -1.77
ACTN4O43707 RNU6-1083P-201ENST00000384022 107 ntBASIC3.98□□□□□ -1.77
ACTN4O43707 RNU6-787P-201ENST00000384032 107 ntBASIC3.98□□□□□ -1.77
ACTN4O43707 Y_RNA.440-201ENST00000384120 114 ntBASIC3.98□□□□□ -1.77
ACTN4O43707 AC096949.1-201ENST00000412047 152 ntBASIC3.98□□□□□ -1.77
ACTN4O43707 AC060773.1-201ENST00000421698 310 ntBASIC3.98□□□□□ -1.77
ACTN4O43707 AL445646.1-201ENST00000431784 216 ntBASIC3.98□□□□□ -1.77
ACTN4O43707 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC3.98□□□□□ -1.77
ACTN4O43707 SNORA18.7-201ENST00000516910 131 ntBASIC3.98□□□□□ -1.77
ACTN4O43707 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC3.98□□□□□ -1.77
ACTN4O43707 MIR4694-201ENST00000578534 80 ntBASIC3.98□□□□□ -1.77
ACTN4O43707 FAS-AS1.2-201ENST00000620386 170 ntBASIC3.98□□□□□ -1.77
ACTN4O43707 AC006111.3-201ENST00000622137 383 ntBASIC3.98□□□□□ -1.77
ACTN4O43707 RNF17-201ENST00000255324 5119 ntAPPRIS P1 TSL 2 BASIC3.98□□□□□ -1.77
ACTN4O43707 ELF1-201ENST00000239882 3566 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
ACTN4O43707 CKAP5-201ENST00000312055 6532 ntTSL 5 BASIC3.97□□□□□ -1.77
ACTN4O43707 SNORD14E-201ENST00000364009 85 ntBASIC3.97□□□□□ -1.77
ACTN4O43707 Y_RNA.547-201ENST00000384654 119 ntBASIC3.97□□□□□ -1.77
ACTN4O43707 ATP5A1P2-201ENST00000412323 255 ntBASIC3.97□□□□□ -1.77
ACTN4O43707 RNU7-80P-201ENST00000459562 61 ntBASIC3.97□□□□□ -1.77
ACTN4O43707 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC3.97□□□□□ -1.77
ACTN4O43707 MIR4425-201ENST00000580572 84 ntBASIC3.97□□□□□ -1.77
ACTN4O43707 CR392039.5-201ENST00000623201 510 ntBASIC3.97□□□□□ -1.77
ACTN4O43707 WDR72-201ENST00000360509 5887 ntAPPRIS P2 TSL 1 (best) BASIC3.97□□□□□ -1.77
ACTN4O43707 CCSER2-201ENST00000224756 7664 ntAPPRIS P1 TSL 5 BASIC3.96□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 107 ms