Protein–RNA interactions for Protein: O14627

CDX4, Homeobox protein CDX-4, humanhuman

Predicted RBP Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDX4O14627 MIR4753-201ENST00000585119 83 ntBASIC1.55□□□□□ -2.16
CDX4O14627 AL355297.3-201ENST00000604082 446 ntBASIC1.55□□□□□ -2.16
CDX4O14627 AC240442.1-201ENST00000616055 283 ntBASIC1.55□□□□□ -2.16
CDX4O14627 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC1.55□□□□□ -2.16
CDX4O14627 ZNF209P-201ENST00000593450 2304 ntBASIC1.55□□□□□ -2.16
CDX4O14627 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC1.54□□□□□ -2.16
CDX4O14627 Y_RNA.26-201ENST00000362539 101 ntBASIC1.54□□□□□ -2.16
CDX4O14627 Y_RNA.179-201ENST00000363844 90 ntBASIC1.54□□□□□ -2.16
CDX4O14627 RNU4-13P-201ENST00000364019 141 ntBASIC1.54□□□□□ -2.16
CDX4O14627 RNA5SP138-201ENST00000365098 114 ntBASIC1.54□□□□□ -2.16
CDX4O14627 RNU6-806P-201ENST00000365147 105 ntBASIC1.54□□□□□ -2.16
CDX4O14627 SNORD114-22-201ENST00000365423 72 ntBASIC1.54□□□□□ -2.16
CDX4O14627 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC1.54□□□□□ -2.16
CDX4O14627 RNU6-793P-201ENST00000384233 104 ntBASIC1.54□□□□□ -2.16
CDX4O14627 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC1.54□□□□□ -2.16
CDX4O14627 AL033519.2-201ENST00000403958 392 ntBASIC1.54□□□□□ -2.16
CDX4O14627 AL158823.1-201ENST00000418441 478 ntBASIC1.54□□□□□ -2.16
CDX4O14627 BX510359.4-201ENST00000423750 193 ntBASIC1.54□□□□□ -2.16
CDX4O14627 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC1.54□□□□□ -2.16
CDX4O14627 RNU2-34P-201ENST00000516534 121 ntBASIC1.54□□□□□ -2.16
CDX4O14627 RN7SKP49-201ENST00000516675 260 ntBASIC1.54□□□□□ -2.16
CDX4O14627 RNU6-897P-201ENST00000517135 105 ntBASIC1.54□□□□□ -2.16
CDX4O14627 AP005660.1-201ENST00000522972 293 ntBASIC1.54□□□□□ -2.16
CDX4O14627 AC090398.1-202ENST00000580403 457 ntTSL 2 BASIC1.54□□□□□ -2.16
CDX4O14627 AL121655.1-201ENST00000605811 308 ntBASIC1.54□□□□□ -2.16
CDX4O14627 AL773524.1-201ENST00000614065 229 ntBASIC1.54□□□□□ -2.16
CDX4O14627 Y_RNA.105-201ENST00000363182 111 ntBASIC1.53□□□□□ -2.16
CDX4O14627 Y_RNA.143-201ENST00000363520 106 ntBASIC1.53□□□□□ -2.16
CDX4O14627 RNU6-961P-201ENST00000363893 105 ntBASIC1.53□□□□□ -2.16
CDX4O14627 Y_RNA.222-201ENST00000364264 102 ntBASIC1.53□□□□□ -2.16
CDX4O14627 SNORD87-201ENST00000364849 89 ntBASIC1.53□□□□□ -2.16
CDX4O14627 RNU6-53P-201ENST00000365367 106 ntBASIC1.53□□□□□ -2.16
CDX4O14627 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC1.53□□□□□ -2.16
CDX4O14627 RNU6-574P-201ENST00000384265 107 ntBASIC1.53□□□□□ -2.16
CDX4O14627 MIR517C-201ENST00000385103 95 ntBASIC1.53□□□□□ -2.16
CDX4O14627 SNORD78.2-201ENST00000391076 69 ntBASIC1.53□□□□□ -2.16
CDX4O14627 RNU6-1109P-201ENST00000391187 107 ntBASIC1.53□□□□□ -2.16
CDX4O14627 MIR1283-1-201ENST00000408494 87 ntBASIC1.53□□□□□ -2.16
CDX4O14627 MIR1283-2-201ENST00000408621 87 ntBASIC1.53□□□□□ -2.16
CDX4O14627 SDAD1P3-201ENST00000427380 333 ntBASIC1.53□□□□□ -2.16
CDX4O14627 DYNLT3P2-201ENST00000442517 295 ntBASIC1.53□□□□□ -2.16
CDX4O14627 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC1.53□□□□□ -2.16
CDX4O14627 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC1.53□□□□□ -2.16
CDX4O14627 AC067942.3-201ENST00000512025 362 ntBASIC1.53□□□□□ -2.16
CDX4O14627 RNY3P15-201ENST00000516297 97 ntBASIC1.53□□□□□ -2.16
CDX4O14627 RNA5SP220-201ENST00000516298 104 ntBASIC1.53□□□□□ -2.16
CDX4O14627 Y_RNA.683-201ENST00000516508 93 ntBASIC1.53□□□□□ -2.16
CDX4O14627 RNU1-92P-201ENST00000517017 135 ntBASIC1.53□□□□□ -2.16
CDX4O14627 RNU1-117P-201ENST00000517041 158 ntBASIC1.53□□□□□ -2.16
CDX4O14627 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC1.53□□□□□ -2.16
CDX4O14627 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC1.53□□□□□ -2.16
CDX4O14627 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC1.53□□□□□ -2.16
CDX4O14627 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC1.53□□□□□ -2.16
CDX4O14627 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC1.53□□□□□ -2.16
CDX4O14627 MIR3618-201ENST00000580330 88 ntBASIC1.53□□□□□ -2.16
CDX4O14627 AL157834.3-201ENST00000615543 103 ntBASIC1.53□□□□□ -2.16
CDX4O14627 Y_RNA.47-201ENST00000362697 108 ntBASIC1.52□□□□□ -2.17
CDX4O14627 Y_RNA.64-201ENST00000362845 102 ntBASIC1.52□□□□□ -2.17
CDX4O14627 Y_RNA.152-201ENST00000363578 100 ntBASIC1.52□□□□□ -2.17
CDX4O14627 RNA5SP493-201ENST00000364115 91 ntBASIC1.52□□□□□ -2.17
CDX4O14627 SNORA63.7-201ENST00000365579 123 ntBASIC1.52□□□□□ -2.17
CDX4O14627 Y_RNA.415-201ENST00000384012 112 ntBASIC1.52□□□□□ -2.17
CDX4O14627 MIR1323-201ENST00000408090 73 ntBASIC1.52□□□□□ -2.17
CDX4O14627 RNA5SP338-201ENST00000410495 85 ntBASIC1.52□□□□□ -2.17
CDX4O14627 RNA5SP504-201ENST00000410676 117 ntBASIC1.52□□□□□ -2.17
CDX4O14627 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC1.52□□□□□ -2.17
CDX4O14627 AC244636.1-201ENST00000421152 228 ntBASIC1.52□□□□□ -2.17
CDX4O14627 AJ239322.2-201ENST00000421696 575 ntTSL 5 BASIC1.52□□□□□ -2.17
CDX4O14627 AC139712.2-201ENST00000424302 339 ntBASIC1.52□□□□□ -2.17
CDX4O14627 AC073910.1-201ENST00000445047 438 ntBASIC1.52□□□□□ -2.17
CDX4O14627 FCF1P4-201ENST00000448326 183 ntBASIC1.52□□□□□ -2.17
CDX4O14627 PCNPP5-201ENST00000452246 481 ntBASIC1.52□□□□□ -2.17
CDX4O14627 AC098869.1-201ENST00000481627 292 ntBASIC1.52□□□□□ -2.17
CDX4O14627 SNORA40.9-201ENST00000515895 93 ntBASIC1.52□□□□□ -2.17
CDX4O14627 RNU6-408P-201ENST00000515910 100 ntBASIC1.52□□□□□ -2.17
CDX4O14627 RNU6-344P-201ENST00000516635 111 ntBASIC1.52□□□□□ -2.17
CDX4O14627 RNA5SP480-201ENST00000516840 109 ntBASIC1.52□□□□□ -2.17
CDX4O14627 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC1.52□□□□□ -2.17
CDX4O14627 AC005786.1-201ENST00000588553 154 ntBASIC1.52□□□□□ -2.17
CDX4O14627 AL078603.1-201ENST00000603824 313 ntBASIC1.52□□□□□ -2.17
CDX4O14627 CENPF-206ENST00000614578 528 ntTSL 5 BASIC1.52□□□□□ -2.17
CDX4O14627 GS1-279B7.1-204ENST00000641809 378 ntBASIC1.52□□□□□ -2.17
CDX4O14627 Y_RNA.19-201ENST00000362462 99 ntBASIC1.51□□□□□ -2.17
CDX4O14627 RNU1-62P-201ENST00000362599 164 ntBASIC1.51□□□□□ -2.17
CDX4O14627 RNU6-545P-201ENST00000362681 104 ntBASIC1.51□□□□□ -2.17
CDX4O14627 Y_RNA.176-201ENST00000363815 109 ntBASIC1.51□□□□□ -2.17
CDX4O14627 RNU6-770P-201ENST00000363929 105 ntBASIC1.51□□□□□ -2.17
CDX4O14627 RNY1-201ENST00000364228 113 ntBASIC1.51□□□□□ -2.17
CDX4O14627 Y_RNA.439-201ENST00000384119 94 ntBASIC1.51□□□□□ -2.17
CDX4O14627 Y_RNA.574-201ENST00000384766 95 ntBASIC1.51□□□□□ -2.17
CDX4O14627 RNU6-121P-201ENST00000410525 99 ntBASIC1.51□□□□□ -2.17
CDX4O14627 RN7SKP101-201ENST00000411376 320 ntBASIC1.51□□□□□ -2.17
CDX4O14627 ELOCP21-201ENST00000412558 336 ntBASIC1.51□□□□□ -2.17
CDX4O14627 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC1.51□□□□□ -2.17
CDX4O14627 LINC01594-201ENST00000445083 611 ntTSL 5 BASIC1.51□□□□□ -2.17
CDX4O14627 AL357134.1-201ENST00000445848 426 ntBASIC1.51□□□□□ -2.17
CDX4O14627 UQCRBP2-201ENST00000447827 297 ntBASIC1.51□□□□□ -2.17
CDX4O14627 RPL26P26-201ENST00000480251 434 ntBASIC1.51□□□□□ -2.17
CDX4O14627 AC108516.1-201ENST00000503666 257 ntTSL 2 BASIC1.51□□□□□ -2.17
CDX4O14627 HMGB3P17-201ENST00000504195 649 ntBASIC1.51□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 98 ms