Protein–RNA interactions for Protein: Q9Y6Q1

CAPN6, Calpain-6, humanhuman

Predictions only

Length 641 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN6Q9Y6Q1 RPL30P4-201ENST00000429309 333 ntBASIC3.12□□□□□ -1.91
CAPN6Q9Y6Q1 RNA5SP153-201ENST00000516498 76 ntBASIC3.12□□□□□ -1.91
CAPN6Q9Y6Q1 RNU6-711P-201ENST00000517255 106 ntBASIC3.12□□□□□ -1.91
CAPN6Q9Y6Q1 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC3.12□□□□□ -1.91
CAPN6Q9Y6Q1 LINC02164-201ENST00000566684 272 ntTSL 3 BASIC3.12□□□□□ -1.91
CAPN6Q9Y6Q1 MIR2681-201ENST00000581814 105 ntBASIC3.12□□□□□ -1.91
CAPN6Q9Y6Q1 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC3.12□□□□□ -1.91
CAPN6Q9Y6Q1 uc_338.4-201ENST00000616635 176 ntBASIC3.12□□□□□ -1.91
CAPN6Q9Y6Q1 U6.95-201ENST00000636931 70 ntBASIC3.12□□□□□ -1.91
CAPN6Q9Y6Q1 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
CAPN6Q9Y6Q1 TRDN-201ENST00000334268 4770 ntAPPRIS P3 TSL 1 (best) BASIC3.12□□□□□ -1.91
CAPN6Q9Y6Q1 FOXP2-211ENST00000408937 6443 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
CAPN6Q9Y6Q1 AC091564.4-201ENST00000533934 2194 ntBASIC3.11□□□□□ -1.91
CAPN6Q9Y6Q1 CADM2-AS1-201ENST00000476021 2656 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
CAPN6Q9Y6Q1 SLC27A2-203ENST00000544960 2025 ntTSL 2 BASIC3.11□□□□□ -1.91
CAPN6Q9Y6Q1 MIR22-201ENST00000362190 85 ntBASIC3.11□□□□□ -1.91
CAPN6Q9Y6Q1 RNU1-72P-201ENST00000362976 153 ntBASIC3.11□□□□□ -1.91
CAPN6Q9Y6Q1 Y_RNA.203-201ENST00000364106 102 ntBASIC3.11□□□□□ -1.91
CAPN6Q9Y6Q1 CYCSP35-201ENST00000451978 304 ntBASIC3.11□□□□□ -1.91
CAPN6Q9Y6Q1 RN7SL499P-201ENST00000481141 276 ntBASIC3.11□□□□□ -1.91
CAPN6Q9Y6Q1 SNORD77.4-201ENST00000516158 81 ntBASIC3.11□□□□□ -1.91
CAPN6Q9Y6Q1 RNU2-34P-201ENST00000516534 121 ntBASIC3.11□□□□□ -1.91
CAPN6Q9Y6Q1 RPL23AP91-201ENST00000569211 455 ntBASIC3.11□□□□□ -1.91
CAPN6Q9Y6Q1 AC012254.1-201ENST00000592747 200 ntTSL 3 BASIC3.11□□□□□ -1.91
CAPN6Q9Y6Q1 FPGT-TNNI3K-202ENST00000370895 7566 ntTSL 2 BASIC3.11□□□□□ -1.91
CAPN6Q9Y6Q1 AC103988.1-201ENST00000566382 2177 ntBASIC3.11□□□□□ -1.91
CAPN6Q9Y6Q1 AC138915.1-201ENST00000565427 1685 ntBASIC3.11□□□□□ -1.91
CAPN6Q9Y6Q1 RNF6-201ENST00000346166 3282 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
CAPN6Q9Y6Q1 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
CAPN6Q9Y6Q1 NOX4-202ENST00000343727 3347 ntTSL 2 BASIC3.1□□□□□ -1.91
CAPN6Q9Y6Q1 PVALB-202ENST00000404171 422 ntTSL 2 BASIC3.1□□□□□ -1.91
CAPN6Q9Y6Q1 AL158147.1-201ENST00000443970 75 ntBASIC3.1□□□□□ -1.91
CAPN6Q9Y6Q1 RNU6-965P-201ENST00000516721 96 ntBASIC3.1□□□□□ -1.91
CAPN6Q9Y6Q1 SCARNA11.3-201ENST00000517276 130 ntBASIC3.1□□□□□ -1.91
CAPN6Q9Y6Q1 AC024270.4-201ENST00000570202 421 ntTSL 3 BASIC3.1□□□□□ -1.91
CAPN6Q9Y6Q1 AC131055.1-201ENST00000584626 316 ntBASIC3.1□□□□□ -1.91
CAPN6Q9Y6Q1 AC118755.2-201ENST00000584676 212 ntTSL 3 BASIC3.1□□□□□ -1.91
CAPN6Q9Y6Q1 AL020997.2-201ENST00000602607 184 ntBASIC3.1□□□□□ -1.91
CAPN6Q9Y6Q1 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC3.1□□□□□ -1.91
CAPN6Q9Y6Q1 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
CAPN6Q9Y6Q1 AC110079.1-202ENST00000635213 138 ntBASIC3.1□□□□□ -1.91
CAPN6Q9Y6Q1 ZNF705G-201ENST00000400156 3644 ntAPPRIS P1 TSL 2 BASIC3.09□□□□□ -1.91
CAPN6Q9Y6Q1 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC3.09□□□□□ -1.91
CAPN6Q9Y6Q1 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
CAPN6Q9Y6Q1 RNU1-22P-201ENST00000363334 158 ntBASIC3.09□□□□□ -1.91
CAPN6Q9Y6Q1 Y_RNA.280-201ENST00000364765 112 ntBASIC3.09□□□□□ -1.91
CAPN6Q9Y6Q1 Y_RNA.634-201ENST00000364811 113 ntBASIC3.09□□□□□ -1.91
CAPN6Q9Y6Q1 SNORD18B-201ENST00000365659 72 ntBASIC3.09□□□□□ -1.91
CAPN6Q9Y6Q1 AL031121.1-201ENST00000406553 254 ntBASIC3.09□□□□□ -1.91
CAPN6Q9Y6Q1 RNU4-47P-201ENST00000410876 114 ntBASIC3.09□□□□□ -1.91
CAPN6Q9Y6Q1 MLLT10P1-201ENST00000418346 262 ntBASIC3.09□□□□□ -1.91
CAPN6Q9Y6Q1 LINC01402-201ENST00000422226 279 ntTSL 3 BASIC3.09□□□□□ -1.91
CAPN6Q9Y6Q1 AC005326.1-201ENST00000429197 123 ntBASIC3.09□□□□□ -1.91
CAPN6Q9Y6Q1 RPL39P40-201ENST00000445481 146 ntBASIC3.09□□□□□ -1.91
CAPN6Q9Y6Q1 RPS4XP11-201ENST00000446897 772 ntBASIC3.09□□□□□ -1.91
CAPN6Q9Y6Q1 AC245102.2-201ENST00000448956 180 ntBASIC3.09□□□□□ -1.91
CAPN6Q9Y6Q1 RPL27AP5-201ENST00000469428 449 ntBASIC3.09□□□□□ -1.91
CAPN6Q9Y6Q1 AC097462.1-201ENST00000514125 324 ntBASIC3.09□□□□□ -1.91
CAPN6Q9Y6Q1 RNU5E-3P-201ENST00000515913 68 ntBASIC3.09□□□□□ -1.91
CAPN6Q9Y6Q1 RNU6-589P-201ENST00000516485 107 ntBASIC3.09□□□□□ -1.91
CAPN6Q9Y6Q1 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC3.09□□□□□ -1.91
CAPN6Q9Y6Q1 AC133485.4-201ENST00000561835 220 ntBASIC3.09□□□□□ -1.91
CAPN6Q9Y6Q1 AC026462.2-201ENST00000565771 286 ntTSL 2 BASIC3.09□□□□□ -1.91
CAPN6Q9Y6Q1 AC138907.4-201ENST00000570107 226 ntBASIC3.09□□□□□ -1.91
CAPN6Q9Y6Q1 MIR3121-201ENST00000579680 77 ntBASIC3.09□□□□□ -1.91
CAPN6Q9Y6Q1 AC024610.1-201ENST00000582685 323 ntTSL 3 BASIC3.09□□□□□ -1.91
CAPN6Q9Y6Q1 MIR4438-201ENST00000585271 93 ntBASIC3.09□□□□□ -1.91
CAPN6Q9Y6Q1 AC090115.4-201ENST00000609970 188 ntBASIC3.09□□□□□ -1.91
CAPN6Q9Y6Q1 U6.105-201ENST00000637379 88 ntBASIC3.09□□□□□ -1.91
CAPN6Q9Y6Q1 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC3.09□□□□□ -1.91
CAPN6Q9Y6Q1 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC3.09□□□□□ -1.92
CAPN6Q9Y6Q1 PIK3C2G-206ENST00000538779 4963 ntTSL 5 BASIC3.09□□□□□ -1.92
CAPN6Q9Y6Q1 PHTF2-201ENST00000248550 4778 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
CAPN6Q9Y6Q1 CHD9-203ENST00000447540 11509 ntTSL 5 BASIC3.08□□□□□ -1.92
CAPN6Q9Y6Q1 TMEM232-201ENST00000455884 2501 ntAPPRIS P2 TSL 2 BASIC3.08□□□□□ -1.92
CAPN6Q9Y6Q1 Y_RNA.91-201ENST00000363042 107 ntBASIC3.08□□□□□ -1.92
CAPN6Q9Y6Q1 MIR183-201ENST00000384958 110 ntBASIC3.08□□□□□ -1.92
CAPN6Q9Y6Q1 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC3.08□□□□□ -1.92
CAPN6Q9Y6Q1 SNORA40.5-201ENST00000391061 128 ntBASIC3.08□□□□□ -1.92
CAPN6Q9Y6Q1 SNORA26-201ENST00000391286 122 ntBASIC3.08□□□□□ -1.92
CAPN6Q9Y6Q1 SNORD88.1-201ENST00000408684 91 ntBASIC3.08□□□□□ -1.92
CAPN6Q9Y6Q1 AP003025.1-201ENST00000421650 149 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
CAPN6Q9Y6Q1 HMGN2P18-201ENST00000450680 270 ntBASIC3.08□□□□□ -1.92
CAPN6Q9Y6Q1 SNORD11-201ENST00000459124 84 ntBASIC3.08□□□□□ -1.92
CAPN6Q9Y6Q1 RPS29P21-201ENST00000496272 170 ntBASIC3.08□□□□□ -1.92
CAPN6Q9Y6Q1 RNU7-172P-201ENST00000517125 64 ntBASIC3.08□□□□□ -1.92
CAPN6Q9Y6Q1 MIR5680-201ENST00000577577 84 ntBASIC3.08□□□□□ -1.92
CAPN6Q9Y6Q1 AC097639.2-201ENST00000603159 172 ntBASIC3.08□□□□□ -1.92
CAPN6Q9Y6Q1 MIR7112-201ENST00000616126 65 ntBASIC3.08□□□□□ -1.92
CAPN6Q9Y6Q1 MIR1248-201ENST00000629190 106 ntBASIC3.08□□□□□ -1.92
CAPN6Q9Y6Q1 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC3.08□□□□□ -1.92
CAPN6Q9Y6Q1 ZNF676-201ENST00000397121 2944 ntAPPRIS P1 TSL 2 BASIC3.08□□□□□ -1.92
CAPN6Q9Y6Q1 N4BP2L2-211ENST00000504114 2513 ntTSL 5 BASIC3.08□□□□□ -1.92
CAPN6Q9Y6Q1 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
CAPN6Q9Y6Q1 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC3.07□□□□□ -1.92
CAPN6Q9Y6Q1 Y_RNA.114-201ENST00000363265 113 ntBASIC3.07□□□□□ -1.92
CAPN6Q9Y6Q1 RNU6-755P-201ENST00000364400 103 ntBASIC3.07□□□□□ -1.92
CAPN6Q9Y6Q1 AC063976.3-201ENST00000426849 329 ntBASIC3.07□□□□□ -1.92
CAPN6Q9Y6Q1 AL023693.1-201ENST00000434255 216 ntTSL 5 BASIC3.07□□□□□ -1.92
CAPN6Q9Y6Q1 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC3.07□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 143.8 ms