Protein–RNA interactions for Protein: Q9Y3Q4

HCN4, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 4, humanhuman

Predictions only

Length 1,203 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCN4Q9Y3Q4 AC063976.4-201ENST00000421971 163 ntBASIC3.66□□□□□ -1.82
HCN4Q9Y3Q4 U91324.1-201ENST00000442864 447 ntTSL 5 BASIC3.66□□□□□ -1.82
HCN4Q9Y3Q4 RPS4XP11-201ENST00000446897 772 ntBASIC3.66□□□□□ -1.82
HCN4Q9Y3Q4 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC3.66□□□□□ -1.82
HCN4Q9Y3Q4 AC133485.4-201ENST00000561835 220 ntBASIC3.66□□□□□ -1.82
HCN4Q9Y3Q4 AC138907.4-201ENST00000570107 226 ntBASIC3.66□□□□□ -1.82
HCN4Q9Y3Q4 MIR3613-201ENST00000579844 87 ntBASIC3.66□□□□□ -1.82
HCN4Q9Y3Q4 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC3.66□□□□□ -1.82
HCN4Q9Y3Q4 AC108081.1-201ENST00000604358 221 ntBASIC3.66□□□□□ -1.82
HCN4Q9Y3Q4 BCLAF1-213ENST00000530767 4186 ntAPPRIS ALT2 TSL 1 (best) BASIC3.66□□□□□ -1.82
HCN4Q9Y3Q4 AC103988.1-201ENST00000566382 2177 ntBASIC3.66□□□□□ -1.82
HCN4Q9Y3Q4 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC3.66□□□□□ -1.82
HCN4Q9Y3Q4 SYNE1-207ENST00000367255 27748 ntAPPRIS P4 TSL 1 (best) BASIC3.65□□□□□ -1.82
HCN4Q9Y3Q4 RNF17-201ENST00000255324 5119 ntAPPRIS P1 TSL 2 BASIC3.65□□□□□ -1.82
HCN4Q9Y3Q4 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC3.65□□□□□ -1.82
HCN4Q9Y3Q4 RAPGEF6-202ENST00000308008 4176 ntTSL 1 (best) BASIC3.65□□□□□ -1.82
HCN4Q9Y3Q4 RNF38-210ENST00000611646 5185 ntTSL 5 BASIC3.65□□□□□ -1.82
HCN4Q9Y3Q4 SLCO1B3-201ENST00000261196 2840 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.82
HCN4Q9Y3Q4 Y_RNA.91-201ENST00000363042 107 ntBASIC3.65□□□□□ -1.83
HCN4Q9Y3Q4 RNU6-647P-201ENST00000364243 107 ntBASIC3.65□□□□□ -1.83
HCN4Q9Y3Q4 RNU6-1138P-201ENST00000365359 106 ntBASIC3.65□□□□□ -1.83
HCN4Q9Y3Q4 RNU1-101P-201ENST00000391171 127 ntBASIC3.65□□□□□ -1.83
HCN4Q9Y3Q4 AC093663.1-201ENST00000497190 394 ntBASIC3.65□□□□□ -1.83
HCN4Q9Y3Q4 AC097462.1-201ENST00000514125 324 ntBASIC3.65□□□□□ -1.83
HCN4Q9Y3Q4 RNA5SP356-201ENST00000515972 94 ntBASIC3.65□□□□□ -1.83
HCN4Q9Y3Q4 MIR4662B-201ENST00000579498 81 ntBASIC3.65□□□□□ -1.83
HCN4Q9Y3Q4 MIR4425-201ENST00000580572 84 ntBASIC3.65□□□□□ -1.83
HCN4Q9Y3Q4 UCA1.1-201ENST00000620952 75 ntBASIC3.65□□□□□ -1.83
HCN4Q9Y3Q4 MIR1248-201ENST00000629190 106 ntBASIC3.65□□□□□ -1.83
HCN4Q9Y3Q4 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC3.65□□□□□ -1.83
HCN4Q9Y3Q4 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC3.64□□□□□ -1.83
HCN4Q9Y3Q4 MMS22L-202ENST00000369251 3949 ntTSL 2 BASIC3.64□□□□□ -1.83
HCN4Q9Y3Q4 RNU6-1209P-201ENST00000363655 107 ntBASIC3.64□□□□□ -1.83
HCN4Q9Y3Q4 MIR562-201ENST00000384894 95 ntBASIC3.64□□□□□ -1.83
HCN4Q9Y3Q4 U6atac.2-201ENST00000408644 118 ntBASIC3.64□□□□□ -1.83
HCN4Q9Y3Q4 Y_RNA.630-201ENST00000411370 108 ntBASIC3.64□□□□□ -1.83
HCN4Q9Y3Q4 MTCO1P44-201ENST00000441935 243 ntBASIC3.64□□□□□ -1.83
HCN4Q9Y3Q4 AC080013.2-201ENST00000460866 323 ntBASIC3.64□□□□□ -1.83
HCN4Q9Y3Q4 RNU7-172P-201ENST00000517125 64 ntBASIC3.64□□□□□ -1.83
HCN4Q9Y3Q4 RNU2-60P-201ENST00000517290 128 ntBASIC3.64□□□□□ -1.83
HCN4Q9Y3Q4 AC091544.4-201ENST00000555268 342 ntBASIC3.64□□□□□ -1.83
HCN4Q9Y3Q4 AC105245.1-201ENST00000581934 244 ntBASIC3.64□□□□□ -1.83
HCN4Q9Y3Q4 MIR3117-201ENST00000584034 78 ntBASIC3.64□□□□□ -1.83
HCN4Q9Y3Q4 MIR4438-201ENST00000585271 93 ntBASIC3.64□□□□□ -1.83
HCN4Q9Y3Q4 AL670379.3-201ENST00000605040 251 ntBASIC3.64□□□□□ -1.83
HCN4Q9Y3Q4 SNORA62.6-201ENST00000606322 83 ntBASIC3.64□□□□□ -1.83
HCN4Q9Y3Q4 AC027045.1-201ENST00000609065 202 ntTSL 5 BASIC3.64□□□□□ -1.83
HCN4Q9Y3Q4 RMST_8.1-201ENST00000610287 165 ntBASIC3.64□□□□□ -1.83
HCN4Q9Y3Q4 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC3.64□□□□□ -1.83
HCN4Q9Y3Q4 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC3.64□□□□□ -1.83
HCN4Q9Y3Q4 NEB-204ENST00000409198 20637 ntAPPRIS P3 TSL 5 BASIC3.64□□□□□ -1.83
HCN4Q9Y3Q4 FZD3-201ENST00000240093 13736 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
HCN4Q9Y3Q4 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC3.63□□□□□ -1.83
HCN4Q9Y3Q4 MTND5P32-201ENST00000560711 1802 ntBASIC3.63□□□□□ -1.83
HCN4Q9Y3Q4 ROCK1P1-203ENST00000608049 2457 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
HCN4Q9Y3Q4 TMEM232-201ENST00000455884 2501 ntAPPRIS P2 TSL 2 BASIC3.63□□□□□ -1.83
HCN4Q9Y3Q4 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC3.63□□□□□ -1.83
HCN4Q9Y3Q4 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC3.63□□□□□ -1.83
HCN4Q9Y3Q4 AC009969.1-201ENST00000438726 172 ntBASIC3.63□□□□□ -1.83
HCN4Q9Y3Q4 RNU6-1061P-201ENST00000516530 99 ntBASIC3.63□□□□□ -1.83
HCN4Q9Y3Q4 Y_RNA.690-201ENST00000516603 95 ntBASIC3.63□□□□□ -1.83
HCN4Q9Y3Q4 AC011604.1-201ENST00000545978 196 ntBASIC3.63□□□□□ -1.83
HCN4Q9Y3Q4 LINC02253-201ENST00000559321 448 ntTSL 2 BASIC3.63□□□□□ -1.83
HCN4Q9Y3Q4 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC3.63□□□□□ -1.83
HCN4Q9Y3Q4 Pinc.1-201ENST00000616452 154 ntBASIC3.63□□□□□ -1.83
HCN4Q9Y3Q4 ABCC9-206ENST00000621589 450 ntTSL 5 BASIC3.63□□□□□ -1.83
HCN4Q9Y3Q4 AC110079.1-202ENST00000635213 138 ntBASIC3.63□□□□□ -1.83
HCN4Q9Y3Q4 MS4A1-212ENST00000534668 3475 ntAPPRIS P1 TSL 2 BASIC3.63□□□□□ -1.83
HCN4Q9Y3Q4 DMXL1-201ENST00000311085 11072 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
HCN4Q9Y3Q4 AL356274.2-201ENST00000624379 3752 ntBASIC3.63□□□□□ -1.83
HCN4Q9Y3Q4 KIAA1524-206ENST00000491772 3877 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
HCN4Q9Y3Q4 AC009487.2-201ENST00000420969 6821 ntBASIC3.62□□□□□ -1.83
HCN4Q9Y3Q4 MACF1-204ENST00000372915 23440 ntAPPRIS ALT2 TSL 5 BASIC3.62□□□□□ -1.83
HCN4Q9Y3Q4 SNORD58C-201ENST00000365223 64 ntBASIC3.62□□□□□ -1.83
HCN4Q9Y3Q4 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC3.62□□□□□ -1.83
HCN4Q9Y3Q4 RPS26P45-201ENST00000471748 340 ntBASIC3.62□□□□□ -1.83
HCN4Q9Y3Q4 OR9P1P-201ENST00000496431 281 ntBASIC3.62□□□□□ -1.83
HCN4Q9Y3Q4 AC008892.1-201ENST00000511861 384 ntTSL 3 BASIC3.62□□□□□ -1.83
HCN4Q9Y3Q4 MRPS36P2-201ENST00000512569 299 ntBASIC3.62□□□□□ -1.83
HCN4Q9Y3Q4 RNU7-149P-201ENST00000516739 59 ntBASIC3.62□□□□□ -1.83
HCN4Q9Y3Q4 RNA5SP170-201ENST00000517150 101 ntBASIC3.62□□□□□ -1.83
HCN4Q9Y3Q4 AC008056.1-201ENST00000553322 394 ntTSL 3 BASIC3.62□□□□□ -1.83
HCN4Q9Y3Q4 AC091178.2-201ENST00000584401 117 ntBASIC3.62□□□□□ -1.83
HCN4Q9Y3Q4 AC011461.1-201ENST00000592671 357 ntTSL 3 BASIC3.62□□□□□ -1.83
HCN4Q9Y3Q4 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC3.62□□□□□ -1.83
HCN4Q9Y3Q4 GABRG2-213ENST00000639046 3058 ntTSL 5 BASIC3.62□□□□□ -1.83
HCN4Q9Y3Q4 CEP170-202ENST00000366542 6828 ntAPPRIS P1 TSL 5 BASIC3.62□□□□□ -1.83
HCN4Q9Y3Q4 ADGRG2-206ENST00000360279 4702 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
HCN4Q9Y3Q4 WDR72-201ENST00000360509 5887 ntAPPRIS P2 TSL 1 (best) BASIC3.62□□□□□ -1.83
HCN4Q9Y3Q4 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
HCN4Q9Y3Q4 FIGNL1-203ENST00000419119 3700 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
HCN4Q9Y3Q4 SYTL2-230ENST00000634661 6672 ntTSL 5 BASIC3.61□□□□□ -1.83
HCN4Q9Y3Q4 AC108866.1-201ENST00000503073 2339 ntTSL 5 BASIC3.61□□□□□ -1.83
HCN4Q9Y3Q4 PRRG1-202ENST00000449135 4481 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
HCN4Q9Y3Q4 Z83843.1-201ENST00000604070 3685 ntBASIC3.61□□□□□ -1.83
HCN4Q9Y3Q4 RNU6-309P-201ENST00000364573 106 ntBASIC3.61□□□□□ -1.83
HCN4Q9Y3Q4 SPRR2E-201ENST00000368750 678 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
HCN4Q9Y3Q4 RNU6-147P-201ENST00000383983 107 ntBASIC3.61□□□□□ -1.83
HCN4Q9Y3Q4 MIR624-201ENST00000385217 97 ntBASIC3.61□□□□□ -1.83
HCN4Q9Y3Q4 RNU4-47P-201ENST00000410876 114 ntBASIC3.61□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 102.1 ms