Protein–RNA interactions for Protein: Q9Y2R2

PTPN22, Tyrosine-protein phosphatase non-receptor type 22, humanhuman

Predictions only

Length 807 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN22Q9Y2R2 DEFB131C-201ENST00000528817 165 ntBASIC3.03□□□□□ -1.92
PTPN22Q9Y2R2 AL713866.2-201ENST00000603579 219 ntBASIC3.03□□□□□ -1.92
PTPN22Q9Y2R2 AC069528.2-201ENST00000624849 1991 ntBASIC3.03□□□□□ -1.92
PTPN22Q9Y2R2 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC3.03□□□□□ -1.93
PTPN22Q9Y2R2 AC114316.2-202ENST00000502934 2957 ntTSL 2 BASIC3.02□□□□□ -1.93
PTPN22Q9Y2R2 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
PTPN22Q9Y2R2 U3.8-201ENST00000363675 217 ntBASIC3.02□□□□□ -1.93
PTPN22Q9Y2R2 RNU6ATAC19P-201ENST00000408096 110 ntBASIC3.02□□□□□ -1.93
PTPN22Q9Y2R2 RNU6-710P-201ENST00000410424 105 ntBASIC3.02□□□□□ -1.93
PTPN22Q9Y2R2 RN7SKP123-201ENST00000410732 291 ntBASIC3.02□□□□□ -1.93
PTPN22Q9Y2R2 MTATP6P29-201ENST00000415057 132 ntBASIC3.02□□□□□ -1.93
PTPN22Q9Y2R2 AC027124.2-201ENST00000428249 105 ntBASIC3.02□□□□□ -1.93
PTPN22Q9Y2R2 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC3.02□□□□□ -1.93
PTPN22Q9Y2R2 RNA5SP282-201ENST00000516355 108 ntBASIC3.02□□□□□ -1.93
PTPN22Q9Y2R2 AC100767.1-201ENST00000528178 123 ntBASIC3.02□□□□□ -1.93
PTPN22Q9Y2R2 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC3.02□□□□□ -1.93
PTPN22Q9Y2R2 MIR548AI-201ENST00000579940 88 ntBASIC3.02□□□□□ -1.93
PTPN22Q9Y2R2 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC3.02□□□□□ -1.93
PTPN22Q9Y2R2 AC026523.1-201ENST00000617221 490 ntTSL 5 BASIC3.02□□□□□ -1.93
PTPN22Q9Y2R2 AL353997.5-201ENST00000618886 171 ntBASIC3.02□□□□□ -1.93
PTPN22Q9Y2R2 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
PTPN22Q9Y2R2 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC3.02□□□□□ -1.93
PTPN22Q9Y2R2 MINDY3-202ENST00000378036 2452 ntTSL 2 BASIC3.01□□□□□ -1.93
PTPN22Q9Y2R2 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
PTPN22Q9Y2R2 RNU6-763P-201ENST00000390865 106 ntBASIC3.01□□□□□ -1.93
PTPN22Q9Y2R2 RNU6-220P-201ENST00000390919 107 ntBASIC3.01□□□□□ -1.93
PTPN22Q9Y2R2 AL031003.1-201ENST00000404229 172 ntBASIC3.01□□□□□ -1.93
PTPN22Q9Y2R2 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC3.01□□□□□ -1.93
PTPN22Q9Y2R2 AL161788.1-201ENST00000441805 169 ntBASIC3.01□□□□□ -1.93
PTPN22Q9Y2R2 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC3.01□□□□□ -1.93
PTPN22Q9Y2R2 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC3.01□□□□□ -1.93
PTPN22Q9Y2R2 MIR5006-201ENST00000583027 110 ntBASIC3.01□□□□□ -1.93
PTPN22Q9Y2R2 ZNF861P-201ENST00000588126 639 ntBASIC3.01□□□□□ -1.93
PTPN22Q9Y2R2 AL355297.2-201ENST00000604792 129 ntBASIC3.01□□□□□ -1.93
PTPN22Q9Y2R2 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC3.01□□□□□ -1.93
PTPN22Q9Y2R2 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC3.01□□□□□ -1.93
PTPN22Q9Y2R2 LCOR-205ENST00000421806 16004 ntTSL 3 BASIC3□□□□□ -1.93
PTPN22Q9Y2R2 RNU6-801P-201ENST00000364087 105 ntBASIC3□□□□□ -1.93
PTPN22Q9Y2R2 SNORA18.2-201ENST00000383865 132 ntBASIC3□□□□□ -1.93
PTPN22Q9Y2R2 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC3□□□□□ -1.93
PTPN22Q9Y2R2 AL356320.1-201ENST00000429616 163 ntBASIC3□□□□□ -1.93
PTPN22Q9Y2R2 RNA5SP320-201ENST00000516263 124 ntBASIC3□□□□□ -1.93
PTPN22Q9Y2R2 RNU6-107P-201ENST00000516643 102 ntBASIC3□□□□□ -1.93
PTPN22Q9Y2R2 RNU2-44P-201ENST00000516795 194 ntBASIC3□□□□□ -1.93
PTPN22Q9Y2R2 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC3□□□□□ -1.93
PTPN22Q9Y2R2 AC107958.3-201ENST00000553410 431 ntTSL 3 BASIC3□□□□□ -1.93
PTPN22Q9Y2R2 ZNRD1-AS1_2.5-201ENST00000614729 76 ntBASIC3□□□□□ -1.93
PTPN22Q9Y2R2 U4.3-201ENST00000621047 82 ntBASIC3□□□□□ -1.93
PTPN22Q9Y2R2 AC131280.1-202ENST00000624067 4211 ntBASIC3□□□□□ -1.93
PTPN22Q9Y2R2 MBNL3-205ENST00000370857 8760 ntTSL 5 BASIC2.99□□□□□ -1.93
PTPN22Q9Y2R2 RNF219-AS1-214ENST00000607862 6001 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
PTPN22Q9Y2R2 Y_RNA.4-201ENST00000362333 112 ntBASIC2.99□□□□□ -1.93
PTPN22Q9Y2R2 SNORD114-1-201ENST00000362705 72 ntBASIC2.99□□□□□ -1.93
PTPN22Q9Y2R2 SNORA38-201ENST00000363946 132 ntBASIC2.99□□□□□ -1.93
PTPN22Q9Y2R2 RNU6-324P-201ENST00000363957 106 ntBASIC2.99□□□□□ -1.93
PTPN22Q9Y2R2 RNU4-84P-201ENST00000364200 139 ntBASIC2.99□□□□□ -1.93
PTPN22Q9Y2R2 SNORD87-201ENST00000364849 89 ntBASIC2.99□□□□□ -1.93
PTPN22Q9Y2R2 Y_RNA.368-201ENST00000365547 113 ntBASIC2.99□□□□□ -1.93
PTPN22Q9Y2R2 Y_RNA.412-201ENST00000384001 104 ntBASIC2.99□□□□□ -1.93
PTPN22Q9Y2R2 RNU6-1081P-201ENST00000384537 107 ntBASIC2.99□□□□□ -1.93
PTPN22Q9Y2R2 RNU6-381P-201ENST00000391259 108 ntBASIC2.99□□□□□ -1.93
PTPN22Q9Y2R2 AL590004.2-201ENST00000404787 371 ntBASIC2.99□□□□□ -1.93
PTPN22Q9Y2R2 AL355497.1-201ENST00000406262 551 ntBASIC2.99□□□□□ -1.93
PTPN22Q9Y2R2 SNORD88.1-201ENST00000408684 91 ntBASIC2.99□□□□□ -1.93
PTPN22Q9Y2R2 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC2.99□□□□□ -1.93
PTPN22Q9Y2R2 AC104389.3-201ENST00000445629 235 ntBASIC2.99□□□□□ -1.93
PTPN22Q9Y2R2 VTRNA2-2P-201ENST00000516091 103 ntBASIC2.99□□□□□ -1.93
PTPN22Q9Y2R2 MIR3684-201ENST00000579779 74 ntBASIC2.99□□□□□ -1.93
PTPN22Q9Y2R2 AC090616.3-201ENST00000582184 217 ntBASIC2.99□□□□□ -1.93
PTPN22Q9Y2R2 AC013791.1-201ENST00000616619 62 ntBASIC2.99□□□□□ -1.93
PTPN22Q9Y2R2 FOXP2-211ENST00000408937 6443 ntTSL 1 (best) BASIC2.98□□□□□ -1.93
PTPN22Q9Y2R2 RGS18-201ENST00000367460 2150 ntAPPRIS P1 TSL 1 (best) BASIC2.98□□□□□ -1.93
PTPN22Q9Y2R2 SNORD114-7-201ENST00000362520 77 ntBASIC2.98□□□□□ -1.93
PTPN22Q9Y2R2 Y_RNA.164-201ENST00000363709 102 ntBASIC2.98□□□□□ -1.93
PTPN22Q9Y2R2 RNU6-275P-201ENST00000364910 107 ntBASIC2.98□□□□□ -1.93
PTPN22Q9Y2R2 RNU6-449P-201ENST00000383914 107 ntBASIC2.98□□□□□ -1.93
PTPN22Q9Y2R2 MIR27B-201ENST00000385129 97 ntBASIC2.98□□□□□ -1.93
PTPN22Q9Y2R2 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC2.98□□□□□ -1.93
PTPN22Q9Y2R2 AL135790.2-201ENST00000437701 267 ntBASIC2.98□□□□□ -1.93
PTPN22Q9Y2R2 AC090515.1-201ENST00000465295 476 ntBASIC2.98□□□□□ -1.93
PTPN22Q9Y2R2 RN7SKP164-201ENST00000516138 266 ntBASIC2.98□□□□□ -1.93
PTPN22Q9Y2R2 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC2.98□□□□□ -1.93
PTPN22Q9Y2R2 AC090115.4-201ENST00000609970 188 ntBASIC2.98□□□□□ -1.93
PTPN22Q9Y2R2 STX7-202ENST00000367941 15791 ntAPPRIS P1 TSL 1 (best) BASIC2.98□□□□□ -1.93
PTPN22Q9Y2R2 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC2.98□□□□□ -1.93
PTPN22Q9Y2R2 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC2.97□□□□□ -1.93
PTPN22Q9Y2R2 RNU6-103P-201ENST00000363686 107 ntBASIC2.97□□□□□ -1.93
PTPN22Q9Y2R2 Y_RNA.287-201ENST00000364853 94 ntBASIC2.97□□□□□ -1.93
PTPN22Q9Y2R2 RNU6-1130P-201ENST00000365434 107 ntBASIC2.97□□□□□ -1.93
PTPN22Q9Y2R2 SNORD116-18-201ENST00000383961 92 ntBASIC2.97□□□□□ -1.93
PTPN22Q9Y2R2 Y_RNA.400-201ENST00000383963 111 ntBASIC2.97□□□□□ -1.93
PTPN22Q9Y2R2 SNORA72.4-201ENST00000384174 132 ntBASIC2.97□□□□□ -1.93
PTPN22Q9Y2R2 MIR586-201ENST00000385035 97 ntBASIC2.97□□□□□ -1.93
PTPN22Q9Y2R2 RNU2-2P-201ENST00000410396 191 ntBASIC2.97□□□□□ -1.93
PTPN22Q9Y2R2 RNA5SP344-201ENST00000411081 104 ntBASIC2.97□□□□□ -1.93
PTPN22Q9Y2R2 AC007064.1-201ENST00000412238 351 ntBASIC2.97□□□□□ -1.93
PTPN22Q9Y2R2 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC2.97□□□□□ -1.93
PTPN22Q9Y2R2 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC2.97□□□□□ -1.93
PTPN22Q9Y2R2 U8.19-201ENST00000459095 133 ntBASIC2.97□□□□□ -1.93
PTPN22Q9Y2R2 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC2.97□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 273 ms