Protein–RNA interactions for Protein: Q9UPP1

PHF8, Histone lysine demethylase PHF8, humanhuman

Predictions only

Length 1,060 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHF8Q9UPP1 NCOA1-201ENST00000288599 6952 ntAPPRIS ALT2 TSL 1 (best) BASIC4.83□□□□□ -1.64
PHF8Q9UPP1 MBNL1-224ENST00000545754 5147 ntTSL 5 BASIC4.82□□□□□ -1.64
PHF8Q9UPP1 Y_RNA.290-201ENST00000364879 114 ntBASIC4.82□□□□□ -1.64
PHF8Q9UPP1 MIR1289-1-201ENST00000408836 144 ntBASIC4.82□□□□□ -1.64
PHF8Q9UPP1 RNU6ATAC12P-201ENST00000516542 115 ntBASIC4.82□□□□□ -1.64
PHF8Q9UPP1 RNA5SP367-201ENST00000516557 118 ntBASIC4.82□□□□□ -1.64
PHF8Q9UPP1 MIR5004-201ENST00000579078 107 ntBASIC4.82□□□□□ -1.64
PHF8Q9UPP1 AC073413.2-201ENST00000604332 360 ntBASIC4.82□□□□□ -1.64
PHF8Q9UPP1 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC4.82□□□□□ -1.64
PHF8Q9UPP1 RNF17-201ENST00000255324 5119 ntAPPRIS P1 TSL 2 BASIC4.82□□□□□ -1.64
PHF8Q9UPP1 AC002546.1-201ENST00000588041 2504 ntBASIC4.82□□□□□ -1.64
PHF8Q9UPP1 ZNF271P-202ENST00000465539 1970 ntBASIC4.82□□□□□ -1.64
PHF8Q9UPP1 ANP32E-209ENST00000616917 2989 ntTSL 2 BASIC4.81□□□□□ -1.64
PHF8Q9UPP1 IBTK-209ENST00000510291 4109 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
PHF8Q9UPP1 AC018630.2-201ENST00000534866 2403 ntBASIC4.81□□□□□ -1.64
PHF8Q9UPP1 Y_RNA.510-201ENST00000384511 114 ntBASIC4.81□□□□□ -1.64
PHF8Q9UPP1 RN7SKP111-201ENST00000410349 271 ntBASIC4.81□□□□□ -1.64
PHF8Q9UPP1 RPS15AP28-201ENST00000435088 386 ntBASIC4.81□□□□□ -1.64
PHF8Q9UPP1 AC099677.2-201ENST00000436385 175 ntBASIC4.81□□□□□ -1.64
PHF8Q9UPP1 AC025750.2-201ENST00000442609 450 ntBASIC4.81□□□□□ -1.64
PHF8Q9UPP1 S100A11P2-201ENST00000467589 312 ntBASIC4.81□□□□□ -1.64
PHF8Q9UPP1 UBE2DNL-203ENST00000474922 222 ntBASIC4.81□□□□□ -1.64
PHF8Q9UPP1 SNORA31.21-201ENST00000517180 77 ntBASIC4.81□□□□□ -1.64
PHF8Q9UPP1 AC011824.2-201ENST00000579896 579 ntTSL 4 BASIC4.81□□□□□ -1.64
PHF8Q9UPP1 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
PHF8Q9UPP1 LLPH-201ENST00000266604 7746 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
PHF8Q9UPP1 TAB3-203ENST00000378930 6255 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
PHF8Q9UPP1 AL356274.2-201ENST00000624379 3752 ntBASIC4.81□□□□□ -1.64
PHF8Q9UPP1 ATP2C1-202ENST00000359644 3401 ntAPPRIS P3 TSL 1 (best) BASIC4.81□□□□□ -1.64
PHF8Q9UPP1 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC4.8□□□□□ -1.64
PHF8Q9UPP1 ENOX2-202ENST00000370927 3788 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
PHF8Q9UPP1 AL157396.1-201ENST00000630034 8444 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
PHF8Q9UPP1 AL033397.1-201ENST00000502390 3653 ntTSL 2 BASIC4.8□□□□□ -1.64
PHF8Q9UPP1 RNU1-96P-201ENST00000364163 162 ntBASIC4.8□□□□□ -1.64
PHF8Q9UPP1 Y_RNA.244-201ENST00000364484 109 ntBASIC4.8□□□□□ -1.64
PHF8Q9UPP1 SNORA4.2-201ENST00000365313 147 ntBASIC4.8□□□□□ -1.64
PHF8Q9UPP1 RNU6-1276P-201ENST00000365372 104 ntBASIC4.8□□□□□ -1.64
PHF8Q9UPP1 RNU6-1296P-201ENST00000383879 107 ntBASIC4.8□□□□□ -1.64
PHF8Q9UPP1 MIR1183-201ENST00000408856 89 ntBASIC4.8□□□□□ -1.64
PHF8Q9UPP1 AC010731.3-201ENST00000415029 566 ntTSL 4 BASIC4.8□□□□□ -1.64
PHF8Q9UPP1 AL445490.2-201ENST00000440492 441 ntTSL 3 BASIC4.8□□□□□ -1.64
PHF8Q9UPP1 AC233266.1-201ENST00000454518 96 ntBASIC4.8□□□□□ -1.64
PHF8Q9UPP1 SCGB1D5P-201ENST00000515134 247 ntBASIC4.8□□□□□ -1.64
PHF8Q9UPP1 RNU2-13P-201ENST00000515909 113 ntBASIC4.8□□□□□ -1.64
PHF8Q9UPP1 RNU7-123P-201ENST00000515911 60 ntBASIC4.8□□□□□ -1.64
PHF8Q9UPP1 AL358944.1-201ENST00000528537 144 ntBASIC4.8□□□□□ -1.64
PHF8Q9UPP1 AC026462.2-201ENST00000565771 286 ntTSL 2 BASIC4.8□□□□□ -1.64
PHF8Q9UPP1 AC022217.4-201ENST00000604389 163 ntBASIC4.8□□□□□ -1.64
PHF8Q9UPP1 AC242852.1-201ENST00000612151 96 ntBASIC4.8□□□□□ -1.64
PHF8Q9UPP1 AC244015.1-201ENST00000622301 99 ntBASIC4.8□□□□□ -1.64
PHF8Q9UPP1 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC4.8□□□□□ -1.64
PHF8Q9UPP1 PLAG1-201ENST00000316981 7322 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
PHF8Q9UPP1 Y_RNA.221-201ENST00000364248 96 ntBASIC4.79□□□□□ -1.64
PHF8Q9UPP1 RNU6-1104P-201ENST00000384723 104 ntBASIC4.79□□□□□ -1.64
PHF8Q9UPP1 RNU6-972P-201ENST00000391208 107 ntBASIC4.79□□□□□ -1.64
PHF8Q9UPP1 RNU1-131P-201ENST00000458943 161 ntBASIC4.79□□□□□ -1.64
PHF8Q9UPP1 SNORA4.4-201ENST00000515921 135 ntBASIC4.79□□□□□ -1.64
PHF8Q9UPP1 RNU6-579P-201ENST00000516879 102 ntBASIC4.79□□□□□ -1.64
PHF8Q9UPP1 AC007229.1-201ENST00000590455 412 ntBASIC4.79□□□□□ -1.64
PHF8Q9UPP1 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC4.79□□□□□ -1.64
PHF8Q9UPP1 SLC16A10-201ENST00000368850 10051 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
PHF8Q9UPP1 POSTN-202ENST00000379743 3196 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
PHF8Q9UPP1 DMD-229ENST00000619831 13734 ntAPPRIS ALT2 TSL 5 BASIC4.79□□□□□ -1.64
PHF8Q9UPP1 ERBB4-203ENST00000402597 11699 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
PHF8Q9UPP1 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
PHF8Q9UPP1 TMEM232-201ENST00000455884 2501 ntAPPRIS P2 TSL 2 BASIC4.78□□□□□ -1.64
PHF8Q9UPP1 MIR448-201ENST00000362131 111 ntBASIC4.78□□□□□ -1.64
PHF8Q9UPP1 RNU6-1099P-201ENST00000363533 107 ntBASIC4.78□□□□□ -1.64
PHF8Q9UPP1 RNU1-133P-201ENST00000364867 167 ntBASIC4.78□□□□□ -1.64
PHF8Q9UPP1 MIR802-201ENST00000390235 94 ntBASIC4.78□□□□□ -1.64
PHF8Q9UPP1 AC096949.1-201ENST00000412047 152 ntBASIC4.78□□□□□ -1.64
PHF8Q9UPP1 HMGN2P18-201ENST00000450680 270 ntBASIC4.78□□□□□ -1.64
PHF8Q9UPP1 RNU6-586P-201ENST00000517265 104 ntBASIC4.78□□□□□ -1.64
PHF8Q9UPP1 MIR3683-201ENST00000580847 82 ntBASIC4.78□□□□□ -1.64
PHF8Q9UPP1 MIR4305-201ENST00000583252 102 ntBASIC4.78□□□□□ -1.64
PHF8Q9UPP1 U2.20-201ENST00000613956 192 ntBASIC4.78□□□□□ -1.64
PHF8Q9UPP1 SEC31A-215ENST00000505472 4159 ntTSL 5 BASIC4.78□□□□□ -1.64
PHF8Q9UPP1 IL6ST-205ENST00000381294 2574 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
PHF8Q9UPP1 ADAMTS9-AS1-207ENST00000594810 3609 ntTSL 4 BASIC4.78□□□□□ -1.64
PHF8Q9UPP1 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
PHF8Q9UPP1 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC4.77□□□□□ -1.65
PHF8Q9UPP1 RGPD1-202ENST00000409776 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC4.77□□□□□ -1.65
PHF8Q9UPP1 KIAA0825-203ENST00000513200 4942 ntTSL 5 BASIC4.77□□□□□ -1.65
PHF8Q9UPP1 MIR126-201ENST00000362291 85 ntBASIC4.77□□□□□ -1.65
PHF8Q9UPP1 MIR548O-201ENST00000408583 114 ntBASIC4.77□□□□□ -1.65
PHF8Q9UPP1 AC009238.1-201ENST00000442165 424 ntBASIC4.77□□□□□ -1.65
PHF8Q9UPP1 AC009237.6-201ENST00000446969 424 ntBASIC4.77□□□□□ -1.65
PHF8Q9UPP1 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC4.77□□□□□ -1.65
PHF8Q9UPP1 AC091826.1-201ENST00000514065 313 ntBASIC4.77□□□□□ -1.65
PHF8Q9UPP1 RNA5SP490-201ENST00000517141 136 ntBASIC4.77□□□□□ -1.65
PHF8Q9UPP1 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC4.77□□□□□ -1.65
PHF8Q9UPP1 MIR4778-201ENST00000577635 80 ntBASIC4.77□□□□□ -1.65
PHF8Q9UPP1 ATP8B4-201ENST00000284509 5676 ntAPPRIS P1 TSL 5 BASIC4.77□□□□□ -1.65
PHF8Q9UPP1 DOCK7-204ENST00000454575 6985 ntAPPRIS ALT2 TSL 1 (best) BASIC4.77□□□□□ -1.65
PHF8Q9UPP1 ERBIN-203ENST00000380938 4701 ntTSL 2 BASIC4.77□□□□□ -1.65
PHF8Q9UPP1 Z83843.1-201ENST00000604070 3685 ntBASIC4.77□□□□□ -1.65
PHF8Q9UPP1 DGKI-204ENST00000453654 12928 ntAPPRIS ALT2 TSL 1 (best) BASIC4.77□□□□□ -1.65
PHF8Q9UPP1 ZNF107-203ENST00000395391 6094 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
PHF8Q9UPP1 BCLAF1-214ENST00000531224 7263 ntAPPRIS P3 TSL 1 (best) BASIC4.76□□□□□ -1.65
PHF8Q9UPP1 CLHC1-201ENST00000401408 2248 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 100.6 ms