Protein–RNA interactions for Protein: Q9ULL8

SHROOM4, Protein Shroom4, humanhuman

Predictions only

Length 1,493 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM4Q9ULL8 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC2.7□□□□□ -1.98
SHROOM4Q9ULL8 AC073910.1-201ENST00000445047 438 ntBASIC2.7□□□□□ -1.98
SHROOM4Q9ULL8 RNU6-559P-201ENST00000516151 98 ntBASIC2.7□□□□□ -1.98
SHROOM4Q9ULL8 AL359075.3-201ENST00000613288 217 ntBASIC2.7□□□□□ -1.98
SHROOM4Q9ULL8 AC073323.1-201ENST00000419832 451 ntTSL 2 BASIC2.69□□□□□ -1.98
SHROOM4Q9ULL8 Y_RNA.653-201ENST00000459091 95 ntBASIC2.69□□□□□ -1.98
SHROOM4Q9ULL8 AC108037.1-201ENST00000514103 423 ntTSL 3 BASIC2.69□□□□□ -1.98
SHROOM4Q9ULL8 CDKN3-212ENST00000620759 196 ntTSL 5 BASIC2.69□□□□□ -1.98
SHROOM4Q9ULL8 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC2.69□□□□□ -1.98
SHROOM4Q9ULL8 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC2.68□□□□□ -1.98
SHROOM4Q9ULL8 RNU6-1283P-201ENST00000365314 105 ntBASIC2.68□□□□□ -1.98
SHROOM4Q9ULL8 AL035258.1-201ENST00000439450 439 ntTSL 3 BASIC2.68□□□□□ -1.98
SHROOM4Q9ULL8 AL163195.1-201ENST00000496941 348 ntBASIC2.68□□□□□ -1.98
SHROOM4Q9ULL8 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
SHROOM4Q9ULL8 PLD1-217ENST00000627725 174 ntTSL 5 BASIC2.68□□□□□ -1.98
SHROOM4Q9ULL8 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC2.68□□□□□ -1.98
SHROOM4Q9ULL8 SNORA69.1-201ENST00000390904 137 ntBASIC2.67□□□□□ -1.98
SHROOM4Q9ULL8 MTCYBP4-201ENST00000401524 249 ntBASIC2.67□□□□□ -1.98
SHROOM4Q9ULL8 MIR1267-201ENST00000408723 78 ntBASIC2.67□□□□□ -1.98
SHROOM4Q9ULL8 RNA5SP475-201ENST00000410568 110 ntBASIC2.67□□□□□ -1.98
SHROOM4Q9ULL8 snoU13.9-201ENST00000458927 103 ntBASIC2.67□□□□□ -1.98
SHROOM4Q9ULL8 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC2.67□□□□□ -1.98
SHROOM4Q9ULL8 AC004223.1-201ENST00000479840 271 ntBASIC2.67□□□□□ -1.98
SHROOM4Q9ULL8 RNU6-1213P-201ENST00000517075 94 ntBASIC2.67□□□□□ -1.98
SHROOM4Q9ULL8 AC022868.1-201ENST00000517767 391 ntBASIC2.67□□□□□ -1.98
SHROOM4Q9ULL8 AC144568.1-201ENST00000520139 137 ntBASIC2.67□□□□□ -1.98
SHROOM4Q9ULL8 AC104260.1-201ENST00000616660 539 ntBASIC2.67□□□□□ -1.98
SHROOM4Q9ULL8 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC2.67□□□□□ -1.98
SHROOM4Q9ULL8 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC2.66□□□□□ -1.98
SHROOM4Q9ULL8 RNU6-310P-201ENST00000384655 107 ntBASIC2.66□□□□□ -1.98
SHROOM4Q9ULL8 SNORA75.6-201ENST00000391318 127 ntBASIC2.66□□□□□ -1.98
SHROOM4Q9ULL8 Y_RNA.646-201ENST00000410980 101 ntBASIC2.66□□□□□ -1.98
SHROOM4Q9ULL8 TOMM22P2-201ENST00000430735 237 ntBASIC2.66□□□□□ -1.98
SHROOM4Q9ULL8 UQCRBP2-201ENST00000447827 297 ntBASIC2.66□□□□□ -1.98
SHROOM4Q9ULL8 RPL30P15-201ENST00000457129 321 ntBASIC2.66□□□□□ -1.98
SHROOM4Q9ULL8 SNORD65B-201ENST00000459126 73 ntBASIC2.66□□□□□ -1.98
SHROOM4Q9ULL8 RNU6-470P-201ENST00000515954 104 ntBASIC2.66□□□□□ -1.98
SHROOM4Q9ULL8 AC022432.1-201ENST00000595739 310 ntBASIC2.66□□□□□ -1.98
SHROOM4Q9ULL8 MIR1244-1-201ENST00000612829 85 ntBASIC2.66□□□□□ -1.98
SHROOM4Q9ULL8 MIR1244-3-201ENST00000635744 85 ntBASIC2.66□□□□□ -1.98
SHROOM4Q9ULL8 MIR1244-2-201ENST00000636449 85 ntBASIC2.66□□□□□ -1.98
SHROOM4Q9ULL8 MIR1244-4-202ENST00000636813 85 ntBASIC2.66□□□□□ -1.98
SHROOM4Q9ULL8 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC2.66□□□□□ -1.98
SHROOM4Q9ULL8 Y_RNA.474-201ENST00000384341 102 ntBASIC2.65□□□□□ -1.98
SHROOM4Q9ULL8 RNU6-1001P-201ENST00000411265 100 ntBASIC2.65□□□□□ -1.98
SHROOM4Q9ULL8 AC016909.1-201ENST00000415916 166 ntBASIC2.65□□□□□ -1.98
SHROOM4Q9ULL8 COX6CP10-201ENST00000416832 224 ntBASIC2.65□□□□□ -1.98
SHROOM4Q9ULL8 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC2.65□□□□□ -1.98
SHROOM4Q9ULL8 AC093019.1-201ENST00000443135 252 ntBASIC2.65□□□□□ -1.98
SHROOM4Q9ULL8 RPL26P26-201ENST00000480251 434 ntBASIC2.65□□□□□ -1.98
SHROOM4Q9ULL8 MIR3684-201ENST00000579779 74 ntBASIC2.65□□□□□ -1.98
SHROOM4Q9ULL8 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC2.65□□□□□ -1.99
SHROOM4Q9ULL8 JTBP1-201ENST00000441314 247 ntBASIC2.65□□□□□ -1.99
SHROOM4Q9ULL8 MIR4801-201ENST00000582704 82 ntBASIC2.65□□□□□ -1.99
SHROOM4Q9ULL8 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC2.64□□□□□ -1.99
SHROOM4Q9ULL8 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC2.64□□□□□ -1.99
SHROOM4Q9ULL8 RPL31P63-201ENST00000422565 375 ntBASIC2.64□□□□□ -1.99
SHROOM4Q9ULL8 AC010598.1-201ENST00000510378 103 ntBASIC2.64□□□□□ -1.99
SHROOM4Q9ULL8 AC006435.5-201ENST00000624486 112 ntBASIC2.64□□□□□ -1.99
SHROOM4Q9ULL8 RNU6-874P-201ENST00000362390 105 ntBASIC2.63□□□□□ -1.99
SHROOM4Q9ULL8 RNU6-950P-201ENST00000384651 107 ntBASIC2.63□□□□□ -1.99
SHROOM4Q9ULL8 RNU6-1186P-201ENST00000410429 97 ntBASIC2.63□□□□□ -1.99
SHROOM4Q9ULL8 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC2.63□□□□□ -1.99
SHROOM4Q9ULL8 snoU13.27-201ENST00000459278 104 ntBASIC2.63□□□□□ -1.99
SHROOM4Q9ULL8 AC027575.1-201ENST00000481064 460 ntBASIC2.63□□□□□ -1.99
SHROOM4Q9ULL8 AC022493.2-201ENST00000506122 481 ntBASIC2.63□□□□□ -1.99
SHROOM4Q9ULL8 RNA5SP437-201ENST00000517249 129 ntBASIC2.63□□□□□ -1.99
SHROOM4Q9ULL8 AC080078.3-201ENST00000605407 463 ntBASIC2.63□□□□□ -1.99
SHROOM4Q9ULL8 U6.73-201ENST00000619194 103 ntBASIC2.63□□□□□ -1.99
SHROOM4Q9ULL8 AC095038.3-201ENST00000634439 195 ntBASIC2.63□□□□□ -1.99
SHROOM4Q9ULL8 RNU11-5P-201ENST00000391216 129 ntBASIC2.62□□□□□ -1.99
SHROOM4Q9ULL8 ELOCP21-201ENST00000412558 336 ntBASIC2.62□□□□□ -1.99
SHROOM4Q9ULL8 RNU7-99P-201ENST00000516271 62 ntBASIC2.62□□□□□ -1.99
SHROOM4Q9ULL8 MIR4285-201ENST00000581001 85 ntBASIC2.62□□□□□ -1.99
SHROOM4Q9ULL8 LUZP6-201ENST00000589735 177 ntAPPRIS P1 BASIC2.62□□□□□ -1.99
SHROOM4Q9ULL8 AL161722.3-201ENST00000605789 2983 ntBASIC2.62□□□□□ -1.99
SHROOM4Q9ULL8 RNU6-1310P-201ENST00000384153 107 ntBASIC2.61□□□□□ -1.99
SHROOM4Q9ULL8 RNU6-1297P-201ENST00000384415 104 ntBASIC2.61□□□□□ -1.99
SHROOM4Q9ULL8 RN7SKP51-201ENST00000410781 304 ntBASIC2.61□□□□□ -1.99
SHROOM4Q9ULL8 RNU6-1304P-201ENST00000411374 106 ntBASIC2.61□□□□□ -1.99
SHROOM4Q9ULL8 RNA5SP61-201ENST00000516453 100 ntBASIC2.61□□□□□ -1.99
SHROOM4Q9ULL8 RNU7-4P-201ENST00000516961 62 ntBASIC2.61□□□□□ -1.99
SHROOM4Q9ULL8 AC104211.3-201ENST00000518861 270 ntTSL 3 BASIC2.61□□□□□ -1.99
SHROOM4Q9ULL8 FRG2DP-202ENST00000566967 323 ntBASIC2.61□□□□□ -1.99
SHROOM4Q9ULL8 AC125232.2-201ENST00000592457 143 ntBASIC2.61□□□□□ -1.99
SHROOM4Q9ULL8 MIR424-201ENST00000362227 98 ntBASIC2.6□□□□□ -1.99
SHROOM4Q9ULL8 MIR222-201ENST00000384992 110 ntBASIC2.6□□□□□ -1.99
SHROOM4Q9ULL8 CEP57L1P1-201ENST00000430943 1201 ntBASIC2.6□□□□□ -1.99
SHROOM4Q9ULL8 HSPE1P21-201ENST00000438283 308 ntBASIC2.6□□□□□ -1.99
SHROOM4Q9ULL8 U8.22-201ENST00000459141 133 ntBASIC2.6□□□□□ -1.99
SHROOM4Q9ULL8 AC018448.1-201ENST00000552843 316 ntBASIC2.6□□□□□ -1.99
SHROOM4Q9ULL8 AC138058.1-201ENST00000620572 449 ntTSL 3 BASIC2.6□□□□□ -1.99
SHROOM4Q9ULL8 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
SHROOM4Q9ULL8 AC100821.1-201ENST00000523153 2479 ntBASIC2.6□□□□□ -1.99
SHROOM4Q9ULL8 Y_RNA.36-201ENST00000362602 112 ntBASIC2.59□□□□□ -1.99
SHROOM4Q9ULL8 RNU1-78P-201ENST00000391248 165 ntBASIC2.59□□□□□ -1.99
SHROOM4Q9ULL8 Y_RNA.605-201ENST00000410577 105 ntBASIC2.59□□□□□ -1.99
SHROOM4Q9ULL8 MTND4P28-201ENST00000426217 387 ntBASIC2.59□□□□□ -1.99
SHROOM4Q9ULL8 RNU7-94P-201ENST00000459576 63 ntBASIC2.59□□□□□ -1.99
SHROOM4Q9ULL8 AC016925.2-201ENST00000605108 242 ntBASIC2.59□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 101.3 ms