Protein–RNA interactions for Protein: Q9P232

CNTN3, Contactin-3, humanhuman

Predictions only

Length 1,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTN3Q9P232 ZNF705G-201ENST00000400156 3644 ntAPPRIS P1 TSL 2 BASIC3.46□□□□□ -1.86
CNTN3Q9P232 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
CNTN3Q9P232 RNU1-22P-201ENST00000363334 158 ntBASIC3.46□□□□□ -1.86
CNTN3Q9P232 DYNLT3P1-201ENST00000378574 347 ntBASIC3.46□□□□□ -1.86
CNTN3Q9P232 SNORA7.4-201ENST00000384249 137 ntBASIC3.46□□□□□ -1.86
CNTN3Q9P232 CYP2C59P-201ENST00000457790 269 ntBASIC3.46□□□□□ -1.86
CNTN3Q9P232 RPS29P21-201ENST00000496272 170 ntBASIC3.46□□□□□ -1.86
CNTN3Q9P232 Y_RNA.692-201ENST00000516627 105 ntBASIC3.46□□□□□ -1.86
CNTN3Q9P232 AC105245.1-201ENST00000581934 244 ntBASIC3.46□□□□□ -1.86
CNTN3Q9P232 AC023043.3-201ENST00000593113 385 ntBASIC3.46□□□□□ -1.86
CNTN3Q9P232 ADARB1-213ENST00000611195 159 ntTSL 5 BASIC3.46□□□□□ -1.86
CNTN3Q9P232 uc_338.25-201ENST00000613756 156 ntBASIC3.46□□□□□ -1.86
CNTN3Q9P232 MIR1248-201ENST00000629190 106 ntBASIC3.46□□□□□ -1.86
CNTN3Q9P232 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC3.46□□□□□ -1.86
CNTN3Q9P232 TAB3-203ENST00000378930 6255 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
CNTN3Q9P232 AC080128.1-201ENST00000474389 1917 ntBASIC3.46□□□□□ -1.86
CNTN3Q9P232 DDIAS-201ENST00000329143 3367 ntAPPRIS P2 TSL 1 (best) BASIC3.46□□□□□ -1.86
CNTN3Q9P232 PHF6-205ENST00000625464 4434 ntAPPRIS ALT1 TSL 5 BASIC3.45□□□□□ -1.86
CNTN3Q9P232 SUGT1-201ENST00000310528 14131 ntAPPRIS P3 TSL 1 (best) BASIC3.45□□□□□ -1.86
CNTN3Q9P232 FILIP1L-206ENST00000471562 2854 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
CNTN3Q9P232 RNY1P11-201ENST00000363759 113 ntBASIC3.45□□□□□ -1.86
CNTN3Q9P232 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC3.45□□□□□ -1.86
CNTN3Q9P232 RNU6-1064P-201ENST00000410626 104 ntBASIC3.45□□□□□ -1.86
CNTN3Q9P232 RNU2-52P-201ENST00000410680 190 ntBASIC3.45□□□□□ -1.86
CNTN3Q9P232 RNU2-32P-201ENST00000411193 191 ntBASIC3.45□□□□□ -1.86
CNTN3Q9P232 AC080013.2-201ENST00000460866 323 ntBASIC3.45□□□□□ -1.86
CNTN3Q9P232 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC3.45□□□□□ -1.86
CNTN3Q9P232 AC097462.1-201ENST00000514125 324 ntBASIC3.45□□□□□ -1.86
CNTN3Q9P232 SNORA4.4-201ENST00000515921 135 ntBASIC3.45□□□□□ -1.86
CNTN3Q9P232 RNU7-172P-201ENST00000517125 64 ntBASIC3.45□□□□□ -1.86
CNTN3Q9P232 MIR3199-1-201ENST00000582434 88 ntBASIC3.45□□□□□ -1.86
CNTN3Q9P232 MIR4325-201ENST00000583049 90 ntBASIC3.45□□□□□ -1.86
CNTN3Q9P232 MIR4438-201ENST00000585271 93 ntBASIC3.45□□□□□ -1.86
CNTN3Q9P232 AL929325.1-201ENST00000603096 117 ntBASIC3.45□□□□□ -1.86
CNTN3Q9P232 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC3.45□□□□□ -1.86
CNTN3Q9P232 KIAA1109-203ENST00000388738 15574 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
CNTN3Q9P232 CPD-202ENST00000543464 4007 ntTSL 2 BASIC3.44□□□□□ -1.86
CNTN3Q9P232 EVI5-201ENST00000370331 7403 ntAPPRIS P3 TSL 1 (best) BASIC3.44□□□□□ -1.86
CNTN3Q9P232 FAM35CP-201ENST00000554755 2470 ntBASIC3.44□□□□□ -1.86
CNTN3Q9P232 Y_RNA.120-201ENST00000363304 110 ntBASIC3.44□□□□□ -1.86
CNTN3Q9P232 RNU6-136P-201ENST00000384663 107 ntBASIC3.44□□□□□ -1.86
CNTN3Q9P232 RN7SKP220-201ENST00000410611 288 ntBASIC3.44□□□□□ -1.86
CNTN3Q9P232 RNU2-70P-201ENST00000410718 179 ntBASIC3.44□□□□□ -1.86
CNTN3Q9P232 AL031386.1-201ENST00000411940 142 ntTSL 5 BASIC3.44□□□□□ -1.86
CNTN3Q9P232 AL161788.1-201ENST00000441805 169 ntBASIC3.44□□□□□ -1.86
CNTN3Q9P232 MTCO1P44-201ENST00000441935 243 ntBASIC3.44□□□□□ -1.86
CNTN3Q9P232 AC245102.2-201ENST00000448956 180 ntBASIC3.44□□□□□ -1.86
CNTN3Q9P232 HMGN1P18-201ENST00000457642 277 ntBASIC3.44□□□□□ -1.86
CNTN3Q9P232 AC090515.1-201ENST00000465295 476 ntBASIC3.44□□□□□ -1.86
CNTN3Q9P232 SNORD77.4-201ENST00000516158 81 ntBASIC3.44□□□□□ -1.86
CNTN3Q9P232 RNU6-965P-201ENST00000516721 96 ntBASIC3.44□□□□□ -1.86
CNTN3Q9P232 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC3.44□□□□□ -1.86
CNTN3Q9P232 AC118755.2-201ENST00000584676 212 ntTSL 3 BASIC3.44□□□□□ -1.86
CNTN3Q9P232 AC005000.2-201ENST00000605468 310 ntBASIC3.44□□□□□ -1.86
CNTN3Q9P232 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC3.44□□□□□ -1.86
CNTN3Q9P232 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
CNTN3Q9P232 ZNF676-201ENST00000397121 2944 ntAPPRIS P1 TSL 2 BASIC3.44□□□□□ -1.86
CNTN3Q9P232 CNOT6L-201ENST00000504123 8843 ntAPPRIS P1 TSL 2 BASIC3.44□□□□□ -1.86
CNTN3Q9P232 MIR218-1-201ENST00000384999 110 ntBASIC3.43□□□□□ -1.86
CNTN3Q9P232 MIR95-201ENST00000385072 81 ntBASIC3.43□□□□□ -1.86
CNTN3Q9P232 RNU6-1328P-201ENST00000410938 106 ntBASIC3.43□□□□□ -1.86
CNTN3Q9P232 AC123900.1-201ENST00000420390 96 ntBASIC3.43□□□□□ -1.86
CNTN3Q9P232 EEF1B2P7-201ENST00000451177 676 ntBASIC3.43□□□□□ -1.86
CNTN3Q9P232 RNU7-107P-201ENST00000459121 61 ntBASIC3.43□□□□□ -1.86
CNTN3Q9P232 RNA5SP76-201ENST00000516277 87 ntBASIC3.43□□□□□ -1.86
CNTN3Q9P232 RPL23AP91-201ENST00000569211 455 ntBASIC3.43□□□□□ -1.86
CNTN3Q9P232 MIR4662B-201ENST00000579498 81 ntBASIC3.43□□□□□ -1.86
CNTN3Q9P232 AC097639.2-201ENST00000603159 172 ntBASIC3.43□□□□□ -1.86
CNTN3Q9P232 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC3.43□□□□□ -1.86
CNTN3Q9P232 ZNRD1-AS1_2.5-201ENST00000614729 76 ntBASIC3.43□□□□□ -1.86
CNTN3Q9P232 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC3.43□□□□□ -1.86
CNTN3Q9P232 HELZ-201ENST00000358691 13810 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
CNTN3Q9P232 BMP5-201ENST00000370830 3952 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
CNTN3Q9P232 WRN-201ENST00000298139 5215 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
CNTN3Q9P232 DPP10-205ENST00000410059 6278 ntAPPRIS ALT2 TSL 1 (best) BASIC3.43□□□□□ -1.86
CNTN3Q9P232 SAMD9-201ENST00000379958 6852 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
CNTN3Q9P232 MACF1-201ENST00000289893 19141 ntTSL 5 BASIC3.42□□□□□ -1.86
CNTN3Q9P232 FPGT-TNNI3K-202ENST00000370895 7566 ntTSL 2 BASIC3.42□□□□□ -1.86
CNTN3Q9P232 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
CNTN3Q9P232 RNU6-153P-201ENST00000364422 104 ntBASIC3.42□□□□□ -1.86
CNTN3Q9P232 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC3.42□□□□□ -1.86
CNTN3Q9P232 RNU11-5P-201ENST00000391216 129 ntBASIC3.42□□□□□ -1.86
CNTN3Q9P232 RPL39P40-201ENST00000445481 146 ntBASIC3.42□□□□□ -1.86
CNTN3Q9P232 RPS4XP11-201ENST00000446897 772 ntBASIC3.42□□□□□ -1.86
CNTN3Q9P232 LINC01766-201ENST00000453968 362 ntTSL 3 BASIC3.42□□□□□ -1.86
CNTN3Q9P232 RPS27P29-201ENST00000463110 252 ntBASIC3.42□□□□□ -1.86
CNTN3Q9P232 CKS1BP2-201ENST00000497342 240 ntBASIC3.42□□□□□ -1.86
CNTN3Q9P232 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC3.42□□□□□ -1.86
CNTN3Q9P232 AC023141.11-201ENST00000508864 202 ntBASIC3.42□□□□□ -1.86
CNTN3Q9P232 SCARNA20.6-201ENST00000517251 106 ntBASIC3.42□□□□□ -1.86
CNTN3Q9P232 NDUFA5P6-201ENST00000542110 379 ntBASIC3.42□□□□□ -1.86
CNTN3Q9P232 AC131055.1-201ENST00000584626 316 ntBASIC3.42□□□□□ -1.86
CNTN3Q9P232 AC073476.4-201ENST00000628409 72 ntBASIC3.42□□□□□ -1.86
CNTN3Q9P232 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
CNTN3Q9P232 LPP-220ENST00000617246 18220 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
CNTN3Q9P232 Y_RNA.111-201ENST00000363248 100 ntBASIC3.41□□□□□ -1.86
CNTN3Q9P232 SNORD56.3-201ENST00000363507 71 ntBASIC3.41□□□□□ -1.86
CNTN3Q9P232 Y_RNA.634-201ENST00000364811 113 ntBASIC3.41□□□□□ -1.86
CNTN3Q9P232 SNORD18B-201ENST00000365659 72 ntBASIC3.41□□□□□ -1.86
CNTN3Q9P232 SNORA48.2-201ENST00000390926 124 ntBASIC3.41□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 223 ms