Protein–RNA interactions for Protein: Q9H649

NSUN3, tRNA (cytosine(34)-C(5))-methyltransferase, mitochondrial, humanhuman

Known RBP Predictions only

Length 340 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NSUN3Q9H649 AL160236.1-201ENST00000556317 195 ntBASIC3.19□□□□□ -1.9
NSUN3Q9H649 AC141273.1-201ENST00000565300 479 ntTSL 5 BASIC3.19□□□□□ -1.9
NSUN3Q9H649 AC131055.1-201ENST00000584626 316 ntBASIC3.19□□□□□ -1.9
NSUN3Q9H649 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC3.19□□□□□ -1.9
NSUN3Q9H649 AL138880.2-201ENST00000616214 239 ntBASIC3.19□□□□□ -1.9
NSUN3Q9H649 AC073476.4-201ENST00000628409 72 ntBASIC3.19□□□□□ -1.9
NSUN3Q9H649 CADM2-AS1-201ENST00000476021 2656 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
NSUN3Q9H649 TMEM232-201ENST00000455884 2501 ntAPPRIS P2 TSL 2 BASIC3.19□□□□□ -1.9
NSUN3Q9H649 LRRTM2-201ENST00000274711 6017 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
NSUN3Q9H649 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC3.18□□□□□ -1.9
NSUN3Q9H649 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC3.18□□□□□ -1.9
NSUN3Q9H649 SNORD73B-201ENST00000364394 72 ntBASIC3.18□□□□□ -1.9
NSUN3Q9H649 RNU6-106P-201ENST00000384405 107 ntBASIC3.18□□□□□ -1.9
NSUN3Q9H649 RNU6-19P-201ENST00000384718 107 ntBASIC3.18□□□□□ -1.9
NSUN3Q9H649 MIR548A1-201ENST00000385041 97 ntBASIC3.18□□□□□ -1.9
NSUN3Q9H649 RNU1-101P-201ENST00000391171 127 ntBASIC3.18□□□□□ -1.9
NSUN3Q9H649 MIR873-201ENST00000401120 77 ntBASIC3.18□□□□□ -1.9
NSUN3Q9H649 SNORA79-201ENST00000408376 140 ntBASIC3.18□□□□□ -1.9
NSUN3Q9H649 RNY4P30-201ENST00000410216 95 ntBASIC3.18□□□□□ -1.9
NSUN3Q9H649 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC3.18□□□□□ -1.9
NSUN3Q9H649 AC090515.1-201ENST00000465295 476 ntBASIC3.18□□□□□ -1.9
NSUN3Q9H649 SRIP1-201ENST00000489235 288 ntBASIC3.18□□□□□ -1.9
NSUN3Q9H649 NEDD4-208ENST00000508342 7235 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
NSUN3Q9H649 SNORA64.4-201ENST00000516632 81 ntBASIC3.18□□□□□ -1.9
NSUN3Q9H649 AC026462.2-201ENST00000565771 286 ntTSL 2 BASIC3.18□□□□□ -1.9
NSUN3Q9H649 AL121890.5-201ENST00000620848 304 ntBASIC3.18□□□□□ -1.9
NSUN3Q9H649 MIR3199-2-201ENST00000636243 86 ntBASIC3.18□□□□□ -1.9
NSUN3Q9H649 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC3.18□□□□□ -1.9
NSUN3Q9H649 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC3.18□□□□□ -1.9
NSUN3Q9H649 STAU2-201ENST00000355780 4061 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
NSUN3Q9H649 MARCH7-202ENST00000409175 2402 ntAPPRIS P1 TSL 2 BASIC3.18□□□□□ -1.9
NSUN3Q9H649 LEPR-202ENST00000349533 8227 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
NSUN3Q9H649 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC3.17□□□□□ -1.9
NSUN3Q9H649 SLC27A2-203ENST00000544960 2025 ntTSL 2 BASIC3.17□□□□□ -1.9
NSUN3Q9H649 GMFB-208ENST00000554908 6721 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
NSUN3Q9H649 EXOC6-203ENST00000371552 3564 ntTSL 5 BASIC3.17□□□□□ -1.9
NSUN3Q9H649 SNORD56.3-201ENST00000363507 71 ntBASIC3.17□□□□□ -1.9
NSUN3Q9H649 RNU6-674P-201ENST00000363831 107 ntBASIC3.17□□□□□ -1.9
NSUN3Q9H649 RNU6-309P-201ENST00000364573 106 ntBASIC3.17□□□□□ -1.9
NSUN3Q9H649 DYNLT3P1-201ENST00000378574 347 ntBASIC3.17□□□□□ -1.9
NSUN3Q9H649 RNU6-905P-201ENST00000384434 107 ntBASIC3.17□□□□□ -1.9
NSUN3Q9H649 RNU6-748P-201ENST00000384648 107 ntBASIC3.17□□□□□ -1.9
NSUN3Q9H649 RNA5SP496-201ENST00000391240 109 ntBASIC3.17□□□□□ -1.9
NSUN3Q9H649 U6atac.2-201ENST00000408644 118 ntBASIC3.17□□□□□ -1.9
NSUN3Q9H649 MIR1185-2-201ENST00000408687 86 ntBASIC3.17□□□□□ -1.9
NSUN3Q9H649 RNA5SP293-201ENST00000410527 113 ntBASIC3.17□□□□□ -1.9
NSUN3Q9H649 AC087499.2-201ENST00000432861 149 ntBASIC3.17□□□□□ -1.9
NSUN3Q9H649 RPS3P1-201ENST00000456781 192 ntBASIC3.17□□□□□ -1.9
NSUN3Q9H649 Y_RNA.649-201ENST00000459077 103 ntBASIC3.17□□□□□ -1.9
NSUN3Q9H649 RNU6-437P-201ENST00000459408 95 ntBASIC3.17□□□□□ -1.9
NSUN3Q9H649 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC3.17□□□□□ -1.9
NSUN3Q9H649 RN7SKP19-201ENST00000516016 252 ntBASIC3.17□□□□□ -1.9
NSUN3Q9H649 RNU1-143P-201ENST00000516296 146 ntBASIC3.17□□□□□ -1.9
NSUN3Q9H649 Y_RNA.690-201ENST00000516603 95 ntBASIC3.17□□□□□ -1.9
NSUN3Q9H649 POLR3GP1-201ENST00000594073 261 ntBASIC3.17□□□□□ -1.9
NSUN3Q9H649 RNU6-91P-201ENST00000607774 107 ntBASIC3.17□□□□□ -1.9
NSUN3Q9H649 U1.23-201ENST00000610293 146 ntBASIC3.17□□□□□ -1.9
NSUN3Q9H649 RNU1-68P-201ENST00000615382 146 ntBASIC3.17□□□□□ -1.9
NSUN3Q9H649 MIR6076-201ENST00000617521 113 ntBASIC3.17□□□□□ -1.9
NSUN3Q9H649 U1.39-201ENST00000621562 146 ntBASIC3.17□□□□□ -1.9
NSUN3Q9H649 ROCK1P1-203ENST00000608049 2457 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
NSUN3Q9H649 AC008505.1-204ENST00000637363 2714 ntTSL 5 BASIC3.16□□□□□ -1.9
NSUN3Q9H649 OR2L2-203ENST00000642011 4225 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
NSUN3Q9H649 AC096644.4-201ENST00000563417 2912 ntBASIC3.16□□□□□ -1.9
NSUN3Q9H649 RNU6-647P-201ENST00000364243 107 ntBASIC3.16□□□□□ -1.9
NSUN3Q9H649 Y_RNA.432-201ENST00000384087 111 ntBASIC3.16□□□□□ -1.9
NSUN3Q9H649 MIR586-201ENST00000385035 97 ntBASIC3.16□□□□□ -1.9
NSUN3Q9H649 RNA5SP38-201ENST00000410750 119 ntBASIC3.16□□□□□ -1.9
NSUN3Q9H649 RNU2-55P-201ENST00000411146 174 ntBASIC3.16□□□□□ -1.9
NSUN3Q9H649 AL359195.1-201ENST00000416657 339 ntTSL 3 BASIC3.16□□□□□ -1.9
NSUN3Q9H649 AC245291.1-201ENST00000419501 328 ntBASIC3.16□□□□□ -1.9
NSUN3Q9H649 RPL39P40-201ENST00000445481 146 ntBASIC3.16□□□□□ -1.9
NSUN3Q9H649 RPS27P29-201ENST00000463110 252 ntBASIC3.16□□□□□ -1.9
NSUN3Q9H649 AC107626.1-201ENST00000471084 183 ntBASIC3.16□□□□□ -1.9
NSUN3Q9H649 RPL36AP21-201ENST00000490372 323 ntBASIC3.16□□□□□ -1.9
NSUN3Q9H649 RNU6-537P-201ENST00000517277 103 ntBASIC3.16□□□□□ -1.9
NSUN3Q9H649 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC3.16□□□□□ -1.9
NSUN3Q9H649 AL159152.1-201ENST00000635019 2587 ntBASIC3.16□□□□□ -1.9
NSUN3Q9H649 PRKACB-207ENST00000394838 4294 ntTSL 5 BASIC3.16□□□□□ -1.9
NSUN3Q9H649 IL6ST-205ENST00000381294 2574 ntTSL 1 (best) BASIC3.15□□□□□ -1.9
NSUN3Q9H649 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC3.15□□□□□ -1.9
NSUN3Q9H649 ZNF280D-204ENST00000558320 3666 ntTSL 1 (best) BASIC3.15□□□□□ -1.9
NSUN3Q9H649 RNU6-640P-201ENST00000363693 105 ntBASIC3.15□□□□□ -1.91
NSUN3Q9H649 RNU6-136P-201ENST00000384663 107 ntBASIC3.15□□□□□ -1.91
NSUN3Q9H649 SNORA12-201ENST00000391162 147 ntBASIC3.15□□□□□ -1.91
NSUN3Q9H649 RNU6-554P-201ENST00000410466 106 ntBASIC3.15□□□□□ -1.91
NSUN3Q9H649 RNU6-1077P-201ENST00000410506 102 ntBASIC3.15□□□□□ -1.91
NSUN3Q9H649 ANKRD20A9P-201ENST00000457997 2978 ntBASIC3.15□□□□□ -1.91
NSUN3Q9H649 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC3.15□□□□□ -1.91
NSUN3Q9H649 SNORD19.2-201ENST00000516978 73 ntBASIC3.15□□□□□ -1.91
NSUN3Q9H649 AC007218.2-201ENST00000636913 179 ntTSL 5 BASIC3.15□□□□□ -1.91
NSUN3Q9H649 CATSPERB-201ENST00000256343 3623 ntAPPRIS P2 TSL 1 (best) BASIC3.15□□□□□ -1.91
NSUN3Q9H649 N4BP2L2-211ENST00000504114 2513 ntTSL 5 BASIC3.15□□□□□ -1.91
NSUN3Q9H649 VSTM2A-OT1-201ENST00000456049 3031 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
NSUN3Q9H649 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
NSUN3Q9H649 SLC8A1-207ENST00000406785 20987 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
NSUN3Q9H649 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
NSUN3Q9H649 SNORA27.1-201ENST00000362604 124 ntBASIC3.14□□□□□ -1.91
NSUN3Q9H649 RNA5SP383-201ENST00000362934 120 ntBASIC3.14□□□□□ -1.91
NSUN3Q9H649 SNORD114-19-201ENST00000363072 75 ntBASIC3.14□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 90.2 ms