Protein–RNA interactions for Protein: Q9BWW4

SSBP3, Single-stranded DNA-binding protein 3, humanhuman

Predicted RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3Q9BWW4 MTCO1P44-201ENST00000441935 243 ntBASIC2.7□□□□□ -1.98
SSBP3Q9BWW4 AC098820.1-201ENST00000453157 512 ntTSL 2 BASIC2.7□□□□□ -1.98
SSBP3Q9BWW4 HMGN1P18-201ENST00000457642 277 ntBASIC2.7□□□□□ -1.98
SSBP3Q9BWW4 SNORD77.4-201ENST00000516158 81 ntBASIC2.7□□□□□ -1.98
SSBP3Q9BWW4 MIR2276-201ENST00000516886 89 ntBASIC2.7□□□□□ -1.98
SSBP3Q9BWW4 RNU6-537P-201ENST00000517277 103 ntBASIC2.7□□□□□ -1.98
SSBP3Q9BWW4 RNU2-60P-201ENST00000517290 128 ntBASIC2.7□□□□□ -1.98
SSBP3Q9BWW4 AC015720.1-201ENST00000565251 277 ntBASIC2.7□□□□□ -1.98
SSBP3Q9BWW4 AC007598.2-201ENST00000569490 539 ntTSL 3 BASIC2.7□□□□□ -1.98
SSBP3Q9BWW4 AL929325.1-201ENST00000603096 117 ntBASIC2.7□□□□□ -1.98
SSBP3Q9BWW4 AC097639.2-201ENST00000603159 172 ntBASIC2.7□□□□□ -1.98
SSBP3Q9BWW4 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC2.7□□□□□ -1.98
SSBP3Q9BWW4 IL6ST-205ENST00000381294 2574 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
SSBP3Q9BWW4 PRKACB-219ENST00000614872 4306 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
SSBP3Q9BWW4 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC2.7□□□□□ -1.98
SSBP3Q9BWW4 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC2.69□□□□□ -1.98
SSBP3Q9BWW4 RNU1-70P-201ENST00000362618 164 ntBASIC2.69□□□□□ -1.98
SSBP3Q9BWW4 Y_RNA.91-201ENST00000363042 107 ntBASIC2.69□□□□□ -1.98
SSBP3Q9BWW4 Y_RNA.116-201ENST00000363292 103 ntBASIC2.69□□□□□ -1.98
SSBP3Q9BWW4 RNU6-1164P-201ENST00000364428 107 ntBASIC2.69□□□□□ -1.98
SSBP3Q9BWW4 RNU6-234P-201ENST00000365229 104 ntBASIC2.69□□□□□ -1.98
SSBP3Q9BWW4 U6atac.2-201ENST00000408644 118 ntBASIC2.69□□□□□ -1.98
SSBP3Q9BWW4 RNA5SP127-201ENST00000411051 133 ntBASIC2.69□□□□□ -1.98
SSBP3Q9BWW4 AC016717.1-201ENST00000448918 286 ntBASIC2.69□□□□□ -1.98
SSBP3Q9BWW4 RPS27P22-201ENST00000478056 241 ntBASIC2.69□□□□□ -1.98
SSBP3Q9BWW4 RN7SL504P-201ENST00000494496 287 ntBASIC2.69□□□□□ -1.98
SSBP3Q9BWW4 AC008948.1-201ENST00000506058 325 ntTSL 2 BASIC2.69□□□□□ -1.98
SSBP3Q9BWW4 RNU6-781P-201ENST00000516377 101 ntBASIC2.69□□□□□ -1.98
SSBP3Q9BWW4 RNU6-412P-201ENST00000516434 106 ntBASIC2.69□□□□□ -1.98
SSBP3Q9BWW4 SNORA64.4-201ENST00000516632 81 ntBASIC2.69□□□□□ -1.98
SSBP3Q9BWW4 SNORA31.21-201ENST00000517180 77 ntBASIC2.69□□□□□ -1.98
SSBP3Q9BWW4 RNU1-104P-201ENST00000517280 175 ntBASIC2.69□□□□□ -1.98
SSBP3Q9BWW4 AC109329.2-201ENST00000519658 482 ntBASIC2.69□□□□□ -1.98
SSBP3Q9BWW4 MIR5004-201ENST00000579078 107 ntBASIC2.69□□□□□ -1.98
SSBP3Q9BWW4 MIR4662B-201ENST00000579498 81 ntBASIC2.69□□□□□ -1.98
SSBP3Q9BWW4 AC103810.1-201ENST00000579873 453 ntBASIC2.69□□□□□ -1.98
SSBP3Q9BWW4 YPEL5P2-201ENST00000605553 359 ntBASIC2.69□□□□□ -1.98
SSBP3Q9BWW4 Pinc.1-201ENST00000616452 154 ntBASIC2.69□□□□□ -1.98
SSBP3Q9BWW4 FIGNL1-212ENST00000613602 3187 ntAPPRIS P1 TSL 5 BASIC2.69□□□□□ -1.98
SSBP3Q9BWW4 MAPK10-362ENST00000641864 4484 ntBASIC2.68□□□□□ -1.98
SSBP3Q9BWW4 QSER1-204ENST00000527788 5052 ntTSL 2 BASIC2.68□□□□□ -1.98
SSBP3Q9BWW4 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC2.68□□□□□ -1.98
SSBP3Q9BWW4 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC2.68□□□□□ -1.98
SSBP3Q9BWW4 MIR450A1-201ENST00000362262 91 ntBASIC2.68□□□□□ -1.98
SSBP3Q9BWW4 Y_RNA.111-201ENST00000363248 100 ntBASIC2.68□□□□□ -1.98
SSBP3Q9BWW4 Y_RNA.369-201ENST00000365568 117 ntBASIC2.68□□□□□ -1.98
SSBP3Q9BWW4 MIR23A-201ENST00000385245 73 ntBASIC2.68□□□□□ -1.98
SSBP3Q9BWW4 TRAJ17-201ENST00000390520 63 ntAPPRIS P1 BASIC2.68□□□□□ -1.98
SSBP3Q9BWW4 RNA5SP38-201ENST00000410750 119 ntBASIC2.68□□□□□ -1.98
SSBP3Q9BWW4 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC2.68□□□□□ -1.98
SSBP3Q9BWW4 RN7SL863P-201ENST00000462370 296 ntBASIC2.68□□□□□ -1.98
SSBP3Q9BWW4 RPL27AP5-201ENST00000469428 449 ntBASIC2.68□□□□□ -1.98
SSBP3Q9BWW4 Y_RNA.677-201ENST00000516401 85 ntBASIC2.68□□□□□ -1.98
SSBP3Q9BWW4 RNA5SP380-201ENST00000517190 98 ntBASIC2.68□□□□□ -1.98
SSBP3Q9BWW4 AC025647.1-201ENST00000517879 253 ntBASIC2.68□□□□□ -1.98
SSBP3Q9BWW4 MIR4765-201ENST00000585007 77 ntBASIC2.68□□□□□ -1.98
SSBP3Q9BWW4 AL022345.2-201ENST00000606307 135 ntBASIC2.68□□□□□ -1.98
SSBP3Q9BWW4 ADARB1-213ENST00000611195 159 ntTSL 5 BASIC2.68□□□□□ -1.98
SSBP3Q9BWW4 MIR8057-201ENST00000620957 69 ntBASIC2.68□□□□□ -1.98
SSBP3Q9BWW4 AC006111.3-201ENST00000622137 383 ntBASIC2.68□□□□□ -1.98
SSBP3Q9BWW4 CACNB4-222ENST00000636350 7654 ntTSL 5 BASIC2.68□□□□□ -1.98
SSBP3Q9BWW4 CEP70-211ENST00000484888 1993 ntAPPRIS P3 TSL 5 BASIC2.68□□□□□ -1.98
SSBP3Q9BWW4 ZNF479-202ENST00000331162 2072 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
SSBP3Q9BWW4 MBNL3-204ENST00000370853 2661 ntAPPRIS P4 TSL 1 (best) BASIC2.68□□□□□ -1.98
SSBP3Q9BWW4 UBA5-201ENST00000264991 2850 ntTSL 5 BASIC2.68□□□□□ -1.98
SSBP3Q9BWW4 FAM214A-204ENST00000546305 3697 ntTSL 2 BASIC2.68□□□□□ -1.98
SSBP3Q9BWW4 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC2.68□□□□□ -1.98
SSBP3Q9BWW4 BCLAF1P1-201ENST00000505813 2752 ntBASIC2.67□□□□□ -1.98
SSBP3Q9BWW4 MARCH7-202ENST00000409175 2402 ntAPPRIS P1 TSL 2 BASIC2.67□□□□□ -1.98
SSBP3Q9BWW4 SNORD31B-201ENST00000364977 69 ntBASIC2.67□□□□□ -1.98
SSBP3Q9BWW4 RNU6-1240P-201ENST00000365155 104 ntBASIC2.67□□□□□ -1.98
SSBP3Q9BWW4 RNU6-117P-201ENST00000365415 107 ntBASIC2.67□□□□□ -1.98
SSBP3Q9BWW4 RNU6-805P-201ENST00000365643 106 ntBASIC2.67□□□□□ -1.98
SSBP3Q9BWW4 MIR624-201ENST00000385217 97 ntBASIC2.67□□□□□ -1.98
SSBP3Q9BWW4 MIRLET7F2-201ENST00000385277 83 ntBASIC2.67□□□□□ -1.98
SSBP3Q9BWW4 RNY4P30-201ENST00000410216 95 ntBASIC2.67□□□□□ -1.98
SSBP3Q9BWW4 RPS29P21-201ENST00000496272 170 ntBASIC2.67□□□□□ -1.98
SSBP3Q9BWW4 RNU6ATAC13P-201ENST00000516152 131 ntBASIC2.67□□□□□ -1.98
SSBP3Q9BWW4 MIR3200-201ENST00000580767 85 ntBASIC2.67□□□□□ -1.98
SSBP3Q9BWW4 AC013412.1-201ENST00000610687 192 ntBASIC2.67□□□□□ -1.98
SSBP3Q9BWW4 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC2.67□□□□□ -1.98
SSBP3Q9BWW4 CADM2-AS1-201ENST00000476021 2656 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
SSBP3Q9BWW4 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC2.67□□□□□ -1.98
SSBP3Q9BWW4 MTND5P18-201ENST00000445624 1801 ntBASIC2.67□□□□□ -1.98
SSBP3Q9BWW4 TAB3-203ENST00000378930 6255 ntAPPRIS P1 TSL 1 (best) BASIC2.66□□□□□ -1.98
SSBP3Q9BWW4 BMP5-201ENST00000370830 3952 ntAPPRIS P1 TSL 1 (best) BASIC2.66□□□□□ -1.98
SSBP3Q9BWW4 SLC30A6-202ENST00000357055 4758 ntTSL 2 BASIC2.66□□□□□ -1.98
SSBP3Q9BWW4 Y_RNA.52-201ENST00000362760 96 ntBASIC2.66□□□□□ -1.98
SSBP3Q9BWW4 RNU6-508P-201ENST00000363231 103 ntBASIC2.66□□□□□ -1.98
SSBP3Q9BWW4 RNU1-105P-201ENST00000363470 161 ntBASIC2.66□□□□□ -1.98
SSBP3Q9BWW4 RNU6-525P-201ENST00000363685 104 ntBASIC2.66□□□□□ -1.98
SSBP3Q9BWW4 RNU6-438P-201ENST00000365561 103 ntBASIC2.66□□□□□ -1.98
SSBP3Q9BWW4 RNU6-1235P-201ENST00000384559 107 ntBASIC2.66□□□□□ -1.98
SSBP3Q9BWW4 MIR767-201ENST00000390228 109 ntBASIC2.66□□□□□ -1.98
SSBP3Q9BWW4 RNA5SP354-201ENST00000391247 136 ntBASIC2.66□□□□□ -1.98
SSBP3Q9BWW4 RNA5SP293-201ENST00000410527 113 ntBASIC2.66□□□□□ -1.98
SSBP3Q9BWW4 RNA5SP229-201ENST00000410809 99 ntBASIC2.66□□□□□ -1.98
SSBP3Q9BWW4 AC063976.3-201ENST00000426849 329 ntBASIC2.66□□□□□ -1.98
SSBP3Q9BWW4 TRBV25OR9-2-201ENST00000438417 374 ntBASIC2.66□□□□□ -1.98
SSBP3Q9BWW4 SNORD11-201ENST00000459124 84 ntBASIC2.66□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 113.6 ms