Protein–RNA interactions for Protein: Q96SZ6

CDK5RAP1, CDK5 regulatory subunit-associated protein 1, humanhuman

Known RBP Predictions only

Length 601 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1Q96SZ6 LINC02309-201ENST00000553679 207 ntTSL 3 BASIC2.9□□□□□ -1.95
CDK5RAP1Q96SZ6 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC2.9□□□□□ -1.95
CDK5RAP1Q96SZ6 MIR4679-2-201ENST00000578358 77 ntBASIC2.9□□□□□ -1.95
CDK5RAP1Q96SZ6 MIR3605-201ENST00000583214 100 ntBASIC2.9□□□□□ -1.95
CDK5RAP1Q96SZ6 ZNF861P-201ENST00000588126 639 ntBASIC2.9□□□□□ -1.95
CDK5RAP1Q96SZ6 AC120024.3-201ENST00000603167 156 ntBASIC2.9□□□□□ -1.95
CDK5RAP1Q96SZ6 U7.2-201ENST00000607576 63 ntBASIC2.9□□□□□ -1.95
CDK5RAP1Q96SZ6 AL391903.3-201ENST00000612158 163 ntBASIC2.9□□□□□ -1.95
CDK5RAP1Q96SZ6 AC005562.2-201ENST00000618264 111 ntBASIC2.9□□□□□ -1.95
CDK5RAP1Q96SZ6 AC023490.3-201ENST00000621762 358 ntTSL 3 BASIC2.9□□□□□ -1.95
CDK5RAP1Q96SZ6 AP001340.1-201ENST00000624405 217 ntBASIC2.9□□□□□ -1.95
CDK5RAP1Q96SZ6 AC068205.3-201ENST00000636385 468 ntBASIC2.9□□□□□ -1.95
CDK5RAP1Q96SZ6 AP000550.4-201ENST00000639507 358 ntTSL 3 BASIC2.9□□□□□ -1.95
CDK5RAP1Q96SZ6 ABCG2-204ENST00000515655 4276 ntTSL 1 (best) BASIC2.9□□□□□ -1.95
CDK5RAP1Q96SZ6 AC108206.1-201ENST00000570186 4159 ntBASIC2.9□□□□□ -1.95
CDK5RAP1Q96SZ6 AC002543.1-201ENST00000299783 1954 ntBASIC2.89□□□□□ -1.95
CDK5RAP1Q96SZ6 PRKAA2-201ENST00000371244 9347 ntAPPRIS P2 TSL 1 (best) BASIC2.89□□□□□ -1.95
CDK5RAP1Q96SZ6 SNORD116-13-201ENST00000384408 92 ntBASIC2.89□□□□□ -1.95
CDK5RAP1Q96SZ6 RNU6-1228P-201ENST00000391014 107 ntBASIC2.89□□□□□ -1.95
CDK5RAP1Q96SZ6 AL513477.1-202ENST00000417061 214 ntBASIC2.89□□□□□ -1.95
CDK5RAP1Q96SZ6 AC063976.3-201ENST00000426849 329 ntBASIC2.89□□□□□ -1.95
CDK5RAP1Q96SZ6 AP004217.1-201ENST00000480579 346 ntBASIC2.89□□□□□ -1.95
CDK5RAP1Q96SZ6 AC145146.1-201ENST00000496370 254 ntBASIC2.89□□□□□ -1.95
CDK5RAP1Q96SZ6 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC2.89□□□□□ -1.95
CDK5RAP1Q96SZ6 SNORD33.1-201ENST00000516213 88 ntBASIC2.89□□□□□ -1.95
CDK5RAP1Q96SZ6 AC124657.1-201ENST00000527819 429 ntTSL 3 BASIC2.89□□□□□ -1.95
CDK5RAP1Q96SZ6 AC008739.2-201ENST00000597006 317 ntBASIC2.89□□□□□ -1.95
CDK5RAP1Q96SZ6 AL670379.2-201ENST00000604983 252 ntBASIC2.89□□□□□ -1.95
CDK5RAP1Q96SZ6 AC025754.2-201ENST00000606491 432 ntBASIC2.89□□□□□ -1.95
CDK5RAP1Q96SZ6 OR51A7-202ENST00000641490 2186 ntAPPRIS P1 BASIC2.89□□□□□ -1.95
CDK5RAP1Q96SZ6 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
CDK5RAP1Q96SZ6 MS4A14-202ENST00000395001 3401 ntTSL 5 BASIC2.89□□□□□ -1.95
CDK5RAP1Q96SZ6 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
CDK5RAP1Q96SZ6 SNORD45.3-201ENST00000363836 72 ntBASIC2.88□□□□□ -1.95
CDK5RAP1Q96SZ6 Y_RNA.393-201ENST00000383936 102 ntBASIC2.88□□□□□ -1.95
CDK5RAP1Q96SZ6 SNORA67.2-201ENST00000384300 149 ntBASIC2.88□□□□□ -1.95
CDK5RAP1Q96SZ6 RNU2-49P-201ENST00000410666 184 ntBASIC2.88□□□□□ -1.95
CDK5RAP1Q96SZ6 RNA5SP184-201ENST00000411071 108 ntBASIC2.88□□□□□ -1.95
CDK5RAP1Q96SZ6 Z82209.1-201ENST00000422141 2135 ntBASIC2.88□□□□□ -1.95
CDK5RAP1Q96SZ6 RAB6C-AS1-202ENST00000433431 123 ntBASIC2.88□□□□□ -1.95
CDK5RAP1Q96SZ6 HSPE1P21-201ENST00000438283 308 ntBASIC2.88□□□□□ -1.95
CDK5RAP1Q96SZ6 HSPE1P13-201ENST00000451143 297 ntBASIC2.88□□□□□ -1.95
CDK5RAP1Q96SZ6 AC234781.5-202ENST00000453508 426 ntTSL 3 BASIC2.88□□□□□ -1.95
CDK5RAP1Q96SZ6 RNU2-44P-201ENST00000516795 194 ntBASIC2.88□□□□□ -1.95
CDK5RAP1Q96SZ6 CYCSP26-201ENST00000534107 320 ntBASIC2.88□□□□□ -1.95
CDK5RAP1Q96SZ6 AC090049.2-201ENST00000550377 109 ntBASIC2.88□□□□□ -1.95
CDK5RAP1Q96SZ6 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC2.88□□□□□ -1.95
CDK5RAP1Q96SZ6 MIR4724-201ENST00000579485 89 ntBASIC2.88□□□□□ -1.95
CDK5RAP1Q96SZ6 MIR3136-201ENST00000583498 78 ntBASIC2.88□□□□□ -1.95
CDK5RAP1Q96SZ6 AC068647.2-201ENST00000637380 353 ntBASIC2.88□□□□□ -1.95
CDK5RAP1Q96SZ6 MBNL3-205ENST00000370857 8760 ntTSL 5 BASIC2.88□□□□□ -1.95
CDK5RAP1Q96SZ6 FGF14-201ENST00000376131 12882 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
CDK5RAP1Q96SZ6 AL355596.1-201ENST00000565399 3996 ntBASIC2.88□□□□□ -1.95
CDK5RAP1Q96SZ6 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC2.87□□□□□ -1.95
CDK5RAP1Q96SZ6 OLFM3-206ENST00000536598 2801 ntTSL 5 BASIC2.87□□□□□ -1.95
CDK5RAP1Q96SZ6 MIR367-201ENST00000362299 68 ntBASIC2.87□□□□□ -1.95
CDK5RAP1Q96SZ6 U8.1-201ENST00000362843 134 ntBASIC2.87□□□□□ -1.95
CDK5RAP1Q96SZ6 RNU6-1164P-201ENST00000364428 107 ntBASIC2.87□□□□□ -1.95
CDK5RAP1Q96SZ6 RNU6-728P-201ENST00000365375 104 ntBASIC2.87□□□□□ -1.95
CDK5RAP1Q96SZ6 RNU6-487P-201ENST00000365430 104 ntBASIC2.87□□□□□ -1.95
CDK5RAP1Q96SZ6 Y_RNA.456-201ENST00000384232 111 ntBASIC2.87□□□□□ -1.95
CDK5RAP1Q96SZ6 BCL2L11-207ENST00000405953 425 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
CDK5RAP1Q96SZ6 MIR320B2-201ENST00000408479 138 ntBASIC2.87□□□□□ -1.95
CDK5RAP1Q96SZ6 AIMP1P2-201ENST00000425294 312 ntBASIC2.87□□□□□ -1.95
CDK5RAP1Q96SZ6 RPS27P1-201ENST00000450552 247 ntBASIC2.87□□□□□ -1.95
CDK5RAP1Q96SZ6 TSPY5P-202ENST00000456541 142 ntTSL 3 BASIC2.87□□□□□ -1.95
CDK5RAP1Q96SZ6 snoU13.28-201ENST00000459235 104 ntBASIC2.87□□□□□ -1.95
CDK5RAP1Q96SZ6 RNU5E-3P-201ENST00000515913 68 ntBASIC2.87□□□□□ -1.95
CDK5RAP1Q96SZ6 RNU6-344P-201ENST00000516635 111 ntBASIC2.87□□□□□ -1.95
CDK5RAP1Q96SZ6 Y_RNA.712-201ENST00000517011 92 ntBASIC2.87□□□□□ -1.95
CDK5RAP1Q96SZ6 AC115990.1-201ENST00000526957 301 ntBASIC2.87□□□□□ -1.95
CDK5RAP1Q96SZ6 AC091152.3-201ENST00000604227 325 ntBASIC2.87□□□□□ -1.95
CDK5RAP1Q96SZ6 TCL6_2.1-201ENST00000615162 119 ntBASIC2.87□□□□□ -1.95
CDK5RAP1Q96SZ6 AC073308.1-201ENST00000623696 305 ntBASIC2.87□□□□□ -1.95
CDK5RAP1Q96SZ6 MIR3199-2-201ENST00000636243 86 ntBASIC2.87□□□□□ -1.95
CDK5RAP1Q96SZ6 MIR3914-2-201ENST00000637339 95 ntBASIC2.87□□□□□ -1.95
CDK5RAP1Q96SZ6 PIK3CA-201ENST00000263967 9093 ntAPPRIS P1 TSL 2 BASIC2.87□□□□□ -1.95
CDK5RAP1Q96SZ6 TAB3-205ENST00000378933 6671 ntAPPRIS P1 TSL 1 (best) BASIC2.87□□□□□ -1.95
CDK5RAP1Q96SZ6 BCHE-201ENST00000264381 2454 ntAPPRIS P1 TSL 1 (best) BASIC2.86□□□□□ -1.95
CDK5RAP1Q96SZ6 NOC3L-201ENST00000371361 3455 ntAPPRIS P1 TSL 1 (best) BASIC2.86□□□□□ -1.95
CDK5RAP1Q96SZ6 snoU2_19.1-201ENST00000362361 80 ntBASIC2.86□□□□□ -1.95
CDK5RAP1Q96SZ6 RNU6-859P-201ENST00000362728 107 ntBASIC2.86□□□□□ -1.95
CDK5RAP1Q96SZ6 RNU1-105P-201ENST00000363470 161 ntBASIC2.86□□□□□ -1.95
CDK5RAP1Q96SZ6 RNU6-755P-201ENST00000364400 103 ntBASIC2.86□□□□□ -1.95
CDK5RAP1Q96SZ6 Y_RNA.361-201ENST00000365515 120 ntBASIC2.86□□□□□ -1.95
CDK5RAP1Q96SZ6 RNU6-198P-201ENST00000384258 104 ntBASIC2.86□□□□□ -1.95
CDK5RAP1Q96SZ6 MIR1278-201ENST00000408753 81 ntBASIC2.86□□□□□ -1.95
CDK5RAP1Q96SZ6 RNU6-710P-201ENST00000410424 105 ntBASIC2.86□□□□□ -1.95
CDK5RAP1Q96SZ6 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC2.86□□□□□ -1.95
CDK5RAP1Q96SZ6 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC2.86□□□□□ -1.95
CDK5RAP1Q96SZ6 AC092666.1-201ENST00000492054 573 ntTSL 4 BASIC2.86□□□□□ -1.95
CDK5RAP1Q96SZ6 SEM1P1-201ENST00000506694 209 ntBASIC2.86□□□□□ -1.95
CDK5RAP1Q96SZ6 AC025281.1-201ENST00000567026 265 ntBASIC2.86□□□□□ -1.95
CDK5RAP1Q96SZ6 RPS15AP11-201ENST00000594193 385 ntBASIC2.86□□□□□ -1.95
CDK5RAP1Q96SZ6 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC2.86□□□□□ -1.95
CDK5RAP1Q96SZ6 AC022336.2-201ENST00000568966 2538 ntBASIC2.85□□□□□ -1.95
CDK5RAP1Q96SZ6 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC2.85□□□□□ -1.95
CDK5RAP1Q96SZ6 RNU1-109P-201ENST00000383960 147 ntBASIC2.85□□□□□ -1.95
CDK5RAP1Q96SZ6 MIR627-201ENST00000384979 97 ntBASIC2.85□□□□□ -1.95
CDK5RAP1Q96SZ6 MIR181B1-201ENST00000385240 110 ntBASIC2.85□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 122.4 ms