Protein–RNA interactions for Protein: Q96AJ9

VTI1A, Vesicle transport through interaction with t-SNAREs homolog 1A, humanhuman

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1AQ96AJ9 OR51L1-203ENST00000641819 7300 ntAPPRIS P1 BASIC3.69□□□□□ -1.82
VTI1AQ96AJ9 Y_RNA.273-201ENST00000364703 102 ntBASIC3.69□□□□□ -1.82
VTI1AQ96AJ9 RNU6-1240P-201ENST00000365155 104 ntBASIC3.69□□□□□ -1.82
VTI1AQ96AJ9 RNU6-215P-201ENST00000365169 102 ntBASIC3.69□□□□□ -1.82
VTI1AQ96AJ9 RNA5SP496-201ENST00000391240 109 ntBASIC3.69□□□□□ -1.82
VTI1AQ96AJ9 AL512604.1-201ENST00000404812 257 ntBASIC3.69□□□□□ -1.82
VTI1AQ96AJ9 RN7SKP220-201ENST00000410611 288 ntBASIC3.69□□□□□ -1.82
VTI1AQ96AJ9 AC080013.2-201ENST00000460866 323 ntBASIC3.69□□□□□ -1.82
VTI1AQ96AJ9 RN7SL863P-201ENST00000462370 296 ntBASIC3.69□□□□□ -1.82
VTI1AQ96AJ9 RPS27P22-201ENST00000478056 241 ntBASIC3.69□□□□□ -1.82
VTI1AQ96AJ9 RN7SKP282-201ENST00000516824 299 ntBASIC3.69□□□□□ -1.82
VTI1AQ96AJ9 AC105245.1-201ENST00000581934 244 ntBASIC3.69□□□□□ -1.82
VTI1AQ96AJ9 AL359881.1-201ENST00000602916 267 ntBASIC3.69□□□□□ -1.82
VTI1AQ96AJ9 AL929325.1-201ENST00000603096 117 ntBASIC3.69□□□□□ -1.82
VTI1AQ96AJ9 AC120024.3-201ENST00000603167 156 ntBASIC3.69□□□□□ -1.82
VTI1AQ96AJ9 AC073476.4-201ENST00000628409 72 ntBASIC3.69□□□□□ -1.82
VTI1AQ96AJ9 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC3.69□□□□□ -1.82
VTI1AQ96AJ9 ZBBX-204ENST00000392767 3071 ntAPPRIS ALT2 TSL 5 BASIC3.69□□□□□ -1.82
VTI1AQ96AJ9 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.69□□□□□ -1.82
VTI1AQ96AJ9 LIG4-205ENST00000614526 3884 ntTSL 2 BASIC3.69□□□□□ -1.82
VTI1AQ96AJ9 PRKACB-217ENST00000610457 4206 ntTSL 2 BASIC3.68□□□□□ -1.82
VTI1AQ96AJ9 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
VTI1AQ96AJ9 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC3.68□□□□□ -1.82
VTI1AQ96AJ9 RNU6-80P-201ENST00000384195 107 ntBASIC3.68□□□□□ -1.82
VTI1AQ96AJ9 SNORA75.5-201ENST00000391291 81 ntBASIC3.68□□□□□ -1.82
VTI1AQ96AJ9 RNU2-32P-201ENST00000411193 191 ntBASIC3.68□□□□□ -1.82
VTI1AQ96AJ9 AC008134.1-201ENST00000420943 193 ntBASIC3.68□□□□□ -1.82
VTI1AQ96AJ9 Z96811.1-201ENST00000445880 108 ntBASIC3.68□□□□□ -1.82
VTI1AQ96AJ9 Y_RNA.686-201ENST00000516548 134 ntBASIC3.68□□□□□ -1.82
VTI1AQ96AJ9 MIR2276-201ENST00000516886 89 ntBASIC3.68□□□□□ -1.82
VTI1AQ96AJ9 RNA5SP490-201ENST00000517141 136 ntBASIC3.68□□□□□ -1.82
VTI1AQ96AJ9 AC011603.4-201ENST00000611325 277 ntBASIC3.68□□□□□ -1.82
VTI1AQ96AJ9 AP001340.1-201ENST00000624405 217 ntBASIC3.68□□□□□ -1.82
VTI1AQ96AJ9 PIK3C2G-202ENST00000433979 4840 ntAPPRIS P1 TSL 5 BASIC3.68□□□□□ -1.82
VTI1AQ96AJ9 AC009487.4-201ENST00000624969 3585 ntBASIC3.68□□□□□ -1.82
VTI1AQ96AJ9 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC3.68□□□□□ -1.82
VTI1AQ96AJ9 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC3.68□□□□□ -1.82
VTI1AQ96AJ9 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC3.67□□□□□ -1.82
VTI1AQ96AJ9 RNU4-13P-201ENST00000364019 141 ntBASIC3.67□□□□□ -1.82
VTI1AQ96AJ9 DYNLT3P1-201ENST00000378574 347 ntBASIC3.67□□□□□ -1.82
VTI1AQ96AJ9 RNU6-1336P-201ENST00000383886 109 ntBASIC3.67□□□□□ -1.82
VTI1AQ96AJ9 MIR627-201ENST00000384979 97 ntBASIC3.67□□□□□ -1.82
VTI1AQ96AJ9 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC3.67□□□□□ -1.82
VTI1AQ96AJ9 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC3.67□□□□□ -1.82
VTI1AQ96AJ9 MIR378D2-201ENST00000580636 98 ntBASIC3.67□□□□□ -1.82
VTI1AQ96AJ9 MIR3117-201ENST00000584034 78 ntBASIC3.67□□□□□ -1.82
VTI1AQ96AJ9 AL049861.1-201ENST00000603130 150 ntBASIC3.67□□□□□ -1.82
VTI1AQ96AJ9 HNRNPDLP4-201ENST00000605144 301 ntBASIC3.67□□□□□ -1.82
VTI1AQ96AJ9 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC3.67□□□□□ -1.82
VTI1AQ96AJ9 CC2D2B-210ENST00000636965 3247 ntTSL 5 BASIC3.67□□□□□ -1.82
VTI1AQ96AJ9 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC3.67□□□□□ -1.82
VTI1AQ96AJ9 KIAA1524-206ENST00000491772 3877 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
VTI1AQ96AJ9 PRKACB-219ENST00000614872 4306 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
VTI1AQ96AJ9 RNU1-22P-201ENST00000363334 158 ntBASIC3.66□□□□□ -1.82
VTI1AQ96AJ9 RNU1-23P-201ENST00000363361 144 ntBASIC3.66□□□□□ -1.82
VTI1AQ96AJ9 RNU6-743P-201ENST00000364151 106 ntBASIC3.66□□□□□ -1.82
VTI1AQ96AJ9 RNU6-597P-201ENST00000365620 102 ntBASIC3.66□□□□□ -1.82
VTI1AQ96AJ9 RNU6-546P-201ENST00000383991 107 ntBASIC3.66□□□□□ -1.82
VTI1AQ96AJ9 RNU6-484P-201ENST00000384016 107 ntBASIC3.66□□□□□ -1.82
VTI1AQ96AJ9 AC022018.1-201ENST00000430685 241 ntBASIC3.66□□□□□ -1.82
VTI1AQ96AJ9 AC009969.1-201ENST00000438726 172 ntBASIC3.66□□□□□ -1.82
VTI1AQ96AJ9 MTCO1P44-201ENST00000441935 243 ntBASIC3.66□□□□□ -1.82
VTI1AQ96AJ9 AL020994.3-201ENST00000449126 274 ntTSL 3 BASIC3.66□□□□□ -1.82
VTI1AQ96AJ9 HMGN1P18-201ENST00000457642 277 ntBASIC3.66□□□□□ -1.82
VTI1AQ96AJ9 RNU4-57P-201ENST00000515980 135 ntBASIC3.66□□□□□ -1.82
VTI1AQ96AJ9 RNU2-56P-201ENST00000516826 190 ntBASIC3.66□□□□□ -1.82
VTI1AQ96AJ9 NDUFB9P3-201ENST00000521269 501 ntBASIC3.66□□□□□ -1.82
VTI1AQ96AJ9 AP001328.1-201ENST00000528550 176 ntBASIC3.66□□□□□ -1.82
VTI1AQ96AJ9 DST-204ENST00000361203 22431 ntAPPRIS ALT2 TSL 5 BASIC3.65□□□□□ -1.82
VTI1AQ96AJ9 MAPK10-266ENST00000641066 6555 ntBASIC3.65□□□□□ -1.82
VTI1AQ96AJ9 RASSF8-210ENST00000541490 5505 ntAPPRIS P1 TSL 5 BASIC3.65□□□□□ -1.82
VTI1AQ96AJ9 RTKN2-202ENST00000373789 6641 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.82
VTI1AQ96AJ9 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.82
VTI1AQ96AJ9 ADGRG2-206ENST00000360279 4702 ntTSL 1 (best) BASIC3.65□□□□□ -1.82
VTI1AQ96AJ9 SNORA72-201ENST00000384339 132 ntBASIC3.65□□□□□ -1.83
VTI1AQ96AJ9 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC3.65□□□□□ -1.83
VTI1AQ96AJ9 AC104332.2-201ENST00000429959 156 ntBASIC3.65□□□□□ -1.83
VTI1AQ96AJ9 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC3.65□□□□□ -1.83
VTI1AQ96AJ9 RPS4XP11-201ENST00000446897 772 ntBASIC3.65□□□□□ -1.83
VTI1AQ96AJ9 AC092666.1-201ENST00000492054 573 ntTSL 4 BASIC3.65□□□□□ -1.83
VTI1AQ96AJ9 RNU2-34P-201ENST00000516534 121 ntBASIC3.65□□□□□ -1.83
VTI1AQ96AJ9 RNU6-197P-201ENST00000516680 100 ntBASIC3.65□□□□□ -1.83
VTI1AQ96AJ9 SLCO1B3-201ENST00000261196 2840 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
VTI1AQ96AJ9 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC3.64□□□□□ -1.83
VTI1AQ96AJ9 OXR1-205ENST00000442977 2956 ntTSL 2 BASIC3.64□□□□□ -1.83
VTI1AQ96AJ9 AC080128.1-201ENST00000474389 1917 ntBASIC3.64□□□□□ -1.83
VTI1AQ96AJ9 RNA5SP383-201ENST00000362934 120 ntBASIC3.64□□□□□ -1.83
VTI1AQ96AJ9 RNU6-978P-201ENST00000364371 103 ntBASIC3.64□□□□□ -1.83
VTI1AQ96AJ9 RNU6-915P-201ENST00000364943 103 ntBASIC3.64□□□□□ -1.83
VTI1AQ96AJ9 U91324.1-201ENST00000442864 447 ntTSL 5 BASIC3.64□□□□□ -1.83
VTI1AQ96AJ9 AC245102.2-201ENST00000448956 180 ntBASIC3.64□□□□□ -1.83
VTI1AQ96AJ9 AC097462.1-201ENST00000514125 324 ntBASIC3.64□□□□□ -1.83
VTI1AQ96AJ9 RNU6-659P-201ENST00000516454 104 ntBASIC3.64□□□□□ -1.83
VTI1AQ96AJ9 AC012413.1-201ENST00000521294 519 ntTSL 2 BASIC3.64□□□□□ -1.83
VTI1AQ96AJ9 MIR4438-201ENST00000585271 93 ntBASIC3.64□□□□□ -1.83
VTI1AQ96AJ9 NEDD4-208ENST00000508342 7235 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
VTI1AQ96AJ9 IKZF2-213ENST00000457361 9350 ntTSL 5 BASIC3.63□□□□□ -1.83
VTI1AQ96AJ9 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
VTI1AQ96AJ9 MIR340-201ENST00000362125 95 ntBASIC3.63□□□□□ -1.83
VTI1AQ96AJ9 Y_RNA.525-201ENST00000384570 113 ntBASIC3.63□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 103.3 ms