Protein–RNA interactions for Protein: Q8NCU8

LINC00116, Uncharacterized protein encoded by LINC00116, humanhuman

Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00116Q8NCU8 RNU6-144P-201ENST00000383951 107 ntBASIC3.21□□□□□ -1.9
LINC00116Q8NCU8 SNORA22C-201ENST00000384614 134 ntBASIC3.21□□□□□ -1.9
LINC00116Q8NCU8 RNU6-376P-201ENST00000384731 106 ntBASIC3.21□□□□□ -1.9
LINC00116Q8NCU8 MT-TT-201ENST00000387460 66 ntBASIC3.21□□□□□ -1.9
LINC00116Q8NCU8 MIR1283-1-201ENST00000408494 87 ntBASIC3.21□□□□□ -1.9
LINC00116Q8NCU8 MIR1294-201ENST00000408503 142 ntBASIC3.21□□□□□ -1.9
LINC00116Q8NCU8 AC006461.1-201ENST00000412637 326 ntBASIC3.21□□□□□ -1.9
LINC00116Q8NCU8 AL137159.1-201ENST00000452808 512 ntBASIC3.21□□□□□ -1.9
LINC00116Q8NCU8 AC117454.1-201ENST00000491120 168 ntBASIC3.21□□□□□ -1.9
LINC00116Q8NCU8 AC234781.5-201ENST00000508429 271 ntBASIC3.21□□□□□ -1.9
LINC00116Q8NCU8 SNORA9.3-201ENST00000516383 129 ntBASIC3.21□□□□□ -1.9
LINC00116Q8NCU8 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC3.21□□□□□ -1.9
LINC00116Q8NCU8 MIR4753-201ENST00000585119 83 ntBASIC3.21□□□□□ -1.9
LINC00116Q8NCU8 MIR3658-201ENST00000636291 56 ntBASIC3.21□□□□□ -1.9
LINC00116Q8NCU8 AC068647.2-201ENST00000637380 353 ntBASIC3.21□□□□□ -1.9
LINC00116Q8NCU8 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.2□□□□□ -1.9
LINC00116Q8NCU8 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
LINC00116Q8NCU8 RNU6-199P-201ENST00000362954 107 ntBASIC3.2□□□□□ -1.9
LINC00116Q8NCU8 Y_RNA.337-201ENST00000365312 102 ntBASIC3.2□□□□□ -1.9
LINC00116Q8NCU8 RNU6-805P-201ENST00000365643 106 ntBASIC3.2□□□□□ -1.9
LINC00116Q8NCU8 RNU6-1027P-201ENST00000383998 107 ntBASIC3.2□□□□□ -1.9
LINC00116Q8NCU8 SNORD14D-201ENST00000384390 87 ntBASIC3.2□□□□□ -1.9
LINC00116Q8NCU8 SNORA40-201ENST00000388090 126 ntBASIC3.2□□□□□ -1.9
LINC00116Q8NCU8 MIR300-201ENST00000401138 83 ntBASIC3.2□□□□□ -1.9
LINC00116Q8NCU8 AL359511.1-201ENST00000402970 211 ntBASIC3.2□□□□□ -1.9
LINC00116Q8NCU8 AL135786.1-201ENST00000415892 214 ntBASIC3.2□□□□□ -1.9
LINC00116Q8NCU8 RPL30P13-201ENST00000418873 348 ntBASIC3.2□□□□□ -1.9
LINC00116Q8NCU8 HMGN2P3-201ENST00000433603 273 ntBASIC3.2□□□□□ -1.9
LINC00116Q8NCU8 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC3.2□□□□□ -1.9
LINC00116Q8NCU8 HMGN2P5-201ENST00000436882 273 ntBASIC3.2□□□□□ -1.9
LINC00116Q8NCU8 AC074290.1-201ENST00000448883 135 ntBASIC3.2□□□□□ -1.9
LINC00116Q8NCU8 RNU6-991P-201ENST00000516168 107 ntBASIC3.2□□□□□ -1.9
LINC00116Q8NCU8 RNU6-711P-201ENST00000517255 106 ntBASIC3.2□□□□□ -1.9
LINC00116Q8NCU8 LINC02253-201ENST00000559321 448 ntTSL 2 BASIC3.2□□□□□ -1.9
LINC00116Q8NCU8 MIR3186-201ENST00000577404 85 ntBASIC3.2□□□□□ -1.9
LINC00116Q8NCU8 MIR5688-201ENST00000580619 83 ntBASIC3.2□□□□□ -1.9
LINC00116Q8NCU8 AL391903.3-201ENST00000612158 163 ntBASIC3.2□□□□□ -1.9
LINC00116Q8NCU8 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC3.2□□□□□ -1.9
LINC00116Q8NCU8 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC3.19□□□□□ -1.9
LINC00116Q8NCU8 ZBTB20-201ENST00000357258 27125 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
LINC00116Q8NCU8 Y_RNA.229-201ENST00000364347 113 ntBASIC3.19□□□□□ -1.9
LINC00116Q8NCU8 SNORA20B-201ENST00000384220 132 ntBASIC3.19□□□□□ -1.9
LINC00116Q8NCU8 RNU6-1168P-201ENST00000390831 104 ntBASIC3.19□□□□□ -1.9
LINC00116Q8NCU8 MIR873-201ENST00000401120 77 ntBASIC3.19□□□□□ -1.9
LINC00116Q8NCU8 AL606845.1-201ENST00000404881 255 ntBASIC3.19□□□□□ -1.9
LINC00116Q8NCU8 AL355796.1-201ENST00000406706 323 ntBASIC3.19□□□□□ -1.9
LINC00116Q8NCU8 RNU6-735P-201ENST00000410612 107 ntBASIC3.19□□□□□ -1.9
LINC00116Q8NCU8 AL365277.2-201ENST00000415255 551 ntTSL 3 BASIC3.19□□□□□ -1.9
LINC00116Q8NCU8 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC3.19□□□□□ -1.9
LINC00116Q8NCU8 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC3.19□□□□□ -1.9
LINC00116Q8NCU8 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
LINC00116Q8NCU8 RNU6-486P-201ENST00000363116 107 ntBASIC3.18□□□□□ -1.9
LINC00116Q8NCU8 SNORA14A-201ENST00000364773 135 ntBASIC3.18□□□□□ -1.9
LINC00116Q8NCU8 RNU6-1083P-201ENST00000384022 107 ntBASIC3.18□□□□□ -1.9
LINC00116Q8NCU8 SNORA20-201ENST00000384662 132 ntBASIC3.18□□□□□ -1.9
LINC00116Q8NCU8 SNORD37.2-201ENST00000391075 66 ntBASIC3.18□□□□□ -1.9
LINC00116Q8NCU8 RNU6-383P-201ENST00000410864 94 ntBASIC3.18□□□□□ -1.9
LINC00116Q8NCU8 AC007064.1-201ENST00000412238 351 ntBASIC3.18□□□□□ -1.9
LINC00116Q8NCU8 RPL23AP7-203ENST00000449021 469 ntBASIC3.18□□□□□ -1.9
LINC00116Q8NCU8 AC114982.1-201ENST00000469402 321 ntBASIC3.18□□□□□ -1.9
LINC00116Q8NCU8 AC103879.1-201ENST00000503093 255 ntTSL 2 BASIC3.18□□□□□ -1.9
LINC00116Q8NCU8 SNORA70.14-201ENST00000516205 110 ntBASIC3.18□□□□□ -1.9
LINC00116Q8NCU8 SCARNA17.1-201ENST00000516211 143 ntBASIC3.18□□□□□ -1.9
LINC00116Q8NCU8 SCARNA17.2-201ENST00000516334 143 ntBASIC3.18□□□□□ -1.9
LINC00116Q8NCU8 RNU6-1337P-201ENST00000516525 95 ntBASIC3.18□□□□□ -1.9
LINC00116Q8NCU8 AC068657.1-201ENST00000520807 306 ntBASIC3.18□□□□□ -1.9
LINC00116Q8NCU8 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC3.18□□□□□ -1.9
LINC00116Q8NCU8 AC046143.2-201ENST00000609789 160 ntBASIC3.18□□□□□ -1.9
LINC00116Q8NCU8 SCARNA17.4-201ENST00000614296 143 ntBASIC3.18□□□□□ -1.9
LINC00116Q8NCU8 MIR548AY-201ENST00000617669 107 ntBASIC3.18□□□□□ -1.9
LINC00116Q8NCU8 UCA1.1-201ENST00000620952 75 ntBASIC3.18□□□□□ -1.9
LINC00116Q8NCU8 PRRG1-202ENST00000449135 4481 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
LINC00116Q8NCU8 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC3.18□□□□□ -1.9
LINC00116Q8NCU8 DPP10-205ENST00000410059 6278 ntAPPRIS ALT2 TSL 1 (best) BASIC3.18□□□□□ -1.9
LINC00116Q8NCU8 ELF1-201ENST00000239882 3566 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
LINC00116Q8NCU8 TFEC-201ENST00000265440 6628 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
LINC00116Q8NCU8 LRRTM2-201ENST00000274711 6017 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
LINC00116Q8NCU8 IKZF2-213ENST00000457361 9350 ntTSL 5 BASIC3.17□□□□□ -1.9
LINC00116Q8NCU8 SNORD114-7-201ENST00000362520 77 ntBASIC3.17□□□□□ -1.9
LINC00116Q8NCU8 RNU6-1274P-201ENST00000384557 107 ntBASIC3.17□□□□□ -1.9
LINC00116Q8NCU8 MIR15B-201ENST00000385045 98 ntBASIC3.17□□□□□ -1.9
LINC00116Q8NCU8 RNU6-1228P-201ENST00000391014 107 ntBASIC3.17□□□□□ -1.9
LINC00116Q8NCU8 SNORA36B-201ENST00000410438 131 ntBASIC3.17□□□□□ -1.9
LINC00116Q8NCU8 AL356320.1-201ENST00000429616 163 ntBASIC3.17□□□□□ -1.9
LINC00116Q8NCU8 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC3.17□□□□□ -1.9
LINC00116Q8NCU8 AC108210.2-201ENST00000503681 201 ntBASIC3.17□□□□□ -1.9
LINC00116Q8NCU8 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC3.17□□□□□ -1.9
LINC00116Q8NCU8 MRPS36P2-201ENST00000512569 299 ntBASIC3.17□□□□□ -1.9
LINC00116Q8NCU8 RNU6-561P-201ENST00000516222 102 ntBASIC3.17□□□□□ -1.9
LINC00116Q8NCU8 RNU7-115P-201ENST00000516433 55 ntBASIC3.17□□□□□ -1.9
LINC00116Q8NCU8 RNA5SP281-201ENST00000516504 135 ntBASIC3.17□□□□□ -1.9
LINC00116Q8NCU8 AC027419.1-201ENST00000522976 328 ntBASIC3.17□□□□□ -1.9
LINC00116Q8NCU8 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC3.17□□□□□ -1.9
LINC00116Q8NCU8 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC3.17□□□□□ -1.9
LINC00116Q8NCU8 DEFB122-202ENST00000569013 197 ntBASIC3.17□□□□□ -1.9
LINC00116Q8NCU8 MIR1273D-201ENST00000577266 86 ntBASIC3.17□□□□□ -1.9
LINC00116Q8NCU8 MIR4474-201ENST00000579189 78 ntBASIC3.17□□□□□ -1.9
LINC00116Q8NCU8 snoZ196.1-201ENST00000625269 89 ntBASIC3.17□□□□□ -1.9
LINC00116Q8NCU8 ARHGAP5-202ENST00000345122 9604 ntAPPRIS P3 TSL 5 BASIC3.17□□□□□ -1.9
LINC00116Q8NCU8 C6orf10-204ENST00000447241 2148 ntAPPRIS P3 TSL 5 BASIC3.17□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 116.6 ms