Protein–RNA interactions for Protein: Q8N3V7

SYNPO, Synaptopodin, humanhuman

Predictions only

Length 929 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPOQ8N3V7 RNU6-138P-201ENST00000515952 107 ntBASIC2.78□□□□□ -1.96
SYNPOQ8N3V7 RNU1-41P-201ENST00000516161 162 ntBASIC2.78□□□□□ -1.96
SYNPOQ8N3V7 RNU6-191P-201ENST00000516295 94 ntBASIC2.78□□□□□ -1.96
SYNPOQ8N3V7 RNU1-48P-201ENST00000516400 162 ntBASIC2.78□□□□□ -1.96
SYNPOQ8N3V7 AC005828.6-201ENST00000606610 232 ntBASIC2.78□□□□□ -1.96
SYNPOQ8N3V7 U2.14-201ENST00000615943 113 ntBASIC2.78□□□□□ -1.96
SYNPOQ8N3V7 5S_rRNA.11-201ENST00000618635 84 ntBASIC2.78□□□□□ -1.96
SYNPOQ8N3V7 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC2.77□□□□□ -1.97
SYNPOQ8N3V7 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC2.77□□□□□ -1.97
SYNPOQ8N3V7 SYTL2-230ENST00000634661 6672 ntTSL 5 BASIC2.77□□□□□ -1.97
SYNPOQ8N3V7 RNU1-35P-201ENST00000362782 153 ntBASIC2.77□□□□□ -1.97
SYNPOQ8N3V7 RNU6-200P-201ENST00000364743 107 ntBASIC2.77□□□□□ -1.97
SYNPOQ8N3V7 Y_RNA.341-201ENST00000365341 102 ntBASIC2.77□□□□□ -1.97
SYNPOQ8N3V7 Y_RNA.352-201ENST00000365439 102 ntBASIC2.77□□□□□ -1.97
SYNPOQ8N3V7 RNU6-338P-201ENST00000383888 105 ntBASIC2.77□□□□□ -1.97
SYNPOQ8N3V7 RNU6-209P-201ENST00000384118 107 ntBASIC2.77□□□□□ -1.97
SYNPOQ8N3V7 MIR518A2-201ENST00000384966 87 ntBASIC2.77□□□□□ -1.97
SYNPOQ8N3V7 RNU2-61P-201ENST00000411069 191 ntBASIC2.77□□□□□ -1.97
SYNPOQ8N3V7 TRAPPC2P7-201ENST00000509650 231 ntBASIC2.77□□□□□ -1.97
SYNPOQ8N3V7 Y_RNA.679-201ENST00000516416 91 ntBASIC2.77□□□□□ -1.97
SYNPOQ8N3V7 RNA5SP24-201ENST00000516478 95 ntBASIC2.77□□□□□ -1.97
SYNPOQ8N3V7 RNU6-63P-201ENST00000516690 95 ntBASIC2.77□□□□□ -1.97
SYNPOQ8N3V7 MIR3169-201ENST00000578032 83 ntBASIC2.77□□□□□ -1.97
SYNPOQ8N3V7 AC009779.6-201ENST00000603972 165 ntBASIC2.77□□□□□ -1.97
SYNPOQ8N3V7 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC2.77□□□□□ -1.97
SYNPOQ8N3V7 AC006435.5-201ENST00000624486 112 ntBASIC2.77□□□□□ -1.97
SYNPOQ8N3V7 AC064859.1-201ENST00000624741 174 ntBASIC2.77□□□□□ -1.97
SYNPOQ8N3V7 CTSLP2-204ENST00000629029 392 ntBASIC2.77□□□□□ -1.97
SYNPOQ8N3V7 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC2.77□□□□□ -1.97
SYNPOQ8N3V7 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC2.77□□□□□ -1.97
SYNPOQ8N3V7 ZNF280D-204ENST00000558320 3666 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
SYNPOQ8N3V7 OR2J3-203ENST00000641960 3342 ntAPPRIS P1 BASIC2.77□□□□□ -1.97
SYNPOQ8N3V7 CYLC2-201ENST00000374798 2171 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
SYNPOQ8N3V7 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC2.76□□□□□ -1.97
SYNPOQ8N3V7 CENPCP1-201ENST00000533085 2578 ntBASIC2.76□□□□□ -1.97
SYNPOQ8N3V7 FOXP2-211ENST00000408937 6443 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
SYNPOQ8N3V7 RNU1-96P-201ENST00000364163 162 ntBASIC2.76□□□□□ -1.97
SYNPOQ8N3V7 Y_RNA.287-201ENST00000364853 94 ntBASIC2.76□□□□□ -1.97
SYNPOQ8N3V7 RNU4-70P-201ENST00000384579 139 ntBASIC2.76□□□□□ -1.97
SYNPOQ8N3V7 RNU6-376P-201ENST00000384731 106 ntBASIC2.76□□□□□ -1.97
SYNPOQ8N3V7 SNORA40.19-201ENST00000390846 128 ntBASIC2.76□□□□□ -1.97
SYNPOQ8N3V7 RNA5SP467-201ENST00000391274 118 ntBASIC2.76□□□□□ -1.97
SYNPOQ8N3V7 AL590004.2-201ENST00000404787 371 ntBASIC2.76□□□□□ -1.97
SYNPOQ8N3V7 AC007064.1-201ENST00000412238 351 ntBASIC2.76□□□□□ -1.97
SYNPOQ8N3V7 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC2.76□□□□□ -1.97
SYNPOQ8N3V7 HSPE1P21-201ENST00000438283 308 ntBASIC2.76□□□□□ -1.97
SYNPOQ8N3V7 AL353689.1-201ENST00000438895 199 ntBASIC2.76□□□□□ -1.97
SYNPOQ8N3V7 U91324.1-201ENST00000442864 447 ntTSL 5 BASIC2.76□□□□□ -1.97
SYNPOQ8N3V7 RPS26P55-201ENST00000471178 356 ntBASIC2.76□□□□□ -1.97
SYNPOQ8N3V7 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC2.76□□□□□ -1.97
SYNPOQ8N3V7 RPS29P21-201ENST00000496272 170 ntBASIC2.76□□□□□ -1.97
SYNPOQ8N3V7 RNU6-1337P-201ENST00000516525 95 ntBASIC2.76□□□□□ -1.97
SYNPOQ8N3V7 RNA5SP148-201ENST00000516527 94 ntBASIC2.76□□□□□ -1.97
SYNPOQ8N3V7 RNU7-172P-201ENST00000517125 64 ntBASIC2.76□□□□□ -1.97
SYNPOQ8N3V7 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC2.76□□□□□ -1.97
SYNPOQ8N3V7 SNORD53-201ENST00000579969 78 ntBASIC2.76□□□□□ -1.97
SYNPOQ8N3V7 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC2.76□□□□□ -1.97
SYNPOQ8N3V7 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
SYNPOQ8N3V7 SACS-201ENST00000382292 15324 ntAPPRIS P1 TSL 5 BASIC2.75□□□□□ -1.97
SYNPOQ8N3V7 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
SYNPOQ8N3V7 Y_RNA.117-201ENST00000363294 101 ntBASIC2.75□□□□□ -1.97
SYNPOQ8N3V7 RNY1-201ENST00000364228 113 ntBASIC2.75□□□□□ -1.97
SYNPOQ8N3V7 HMGN2P39-201ENST00000398005 273 ntBASIC2.75□□□□□ -1.97
SYNPOQ8N3V7 HMGN2P3-201ENST00000433603 273 ntBASIC2.75□□□□□ -1.97
SYNPOQ8N3V7 HMGN2P5-201ENST00000436882 273 ntBASIC2.75□□□□□ -1.97
SYNPOQ8N3V7 RNA5SP76-201ENST00000516277 87 ntBASIC2.75□□□□□ -1.97
SYNPOQ8N3V7 SNORA27.4-201ENST00000516650 95 ntBASIC2.75□□□□□ -1.97
SYNPOQ8N3V7 RNU7-193P-201ENST00000516723 65 ntBASIC2.75□□□□□ -1.97
SYNPOQ8N3V7 ZNF861P-201ENST00000588126 639 ntBASIC2.75□□□□□ -1.97
SYNPOQ8N3V7 MIR338-201ENST00000636369 67 ntBASIC2.75□□□□□ -1.97
SYNPOQ8N3V7 CACNB4-238ENST00000636901 7706 ntTSL 5 BASIC2.75□□□□□ -1.97
SYNPOQ8N3V7 RNF219-AS1-214ENST00000607862 6001 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
SYNPOQ8N3V7 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC2.74□□□□□ -1.97
SYNPOQ8N3V7 RNU4-13P-201ENST00000364019 141 ntBASIC2.74□□□□□ -1.97
SYNPOQ8N3V7 RNU6-740P-201ENST00000364734 105 ntBASIC2.74□□□□□ -1.97
SYNPOQ8N3V7 AL603908.1-201ENST00000406098 201 ntBASIC2.74□□□□□ -1.97
SYNPOQ8N3V7 SNORA11.4-201ENST00000408823 129 ntBASIC2.74□□□□□ -1.97
SYNPOQ8N3V7 Y_RNA.590-201ENST00000410140 107 ntBASIC2.74□□□□□ -1.97
SYNPOQ8N3V7 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC2.74□□□□□ -1.97
SYNPOQ8N3V7 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC2.74□□□□□ -1.97
SYNPOQ8N3V7 BTF3P11-201ENST00000426582 477 ntBASIC2.74□□□□□ -1.97
SYNPOQ8N3V7 SUMO1P4-201ENST00000429430 302 ntBASIC2.74□□□□□ -1.97
SYNPOQ8N3V7 SUMO1P3-201ENST00000439961 304 ntBASIC2.74□□□□□ -1.97
SYNPOQ8N3V7 AC008413.1-201ENST00000511864 177 ntBASIC2.74□□□□□ -1.97
SYNPOQ8N3V7 RNU6-1278P-201ENST00000516130 107 ntBASIC2.74□□□□□ -1.97
SYNPOQ8N3V7 RNA5SP282-201ENST00000516355 108 ntBASIC2.74□□□□□ -1.97
SYNPOQ8N3V7 AC009127.3-201ENST00000570531 403 ntBASIC2.74□□□□□ -1.97
SYNPOQ8N3V7 AC130289.1-201ENST00000577321 73 ntBASIC2.74□□□□□ -1.97
SYNPOQ8N3V7 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC2.73□□□□□ -1.97
SYNPOQ8N3V7 Y_RNA.785-201ENST00000384290 109 ntBASIC2.73□□□□□ -1.97
SYNPOQ8N3V7 RNU6-1289P-201ENST00000384431 106 ntBASIC2.73□□□□□ -1.97
SYNPOQ8N3V7 MIR518C-201ENST00000384822 101 ntBASIC2.73□□□□□ -1.97
SYNPOQ8N3V7 MIR524-201ENST00000385242 87 ntBASIC2.73□□□□□ -1.97
SYNPOQ8N3V7 SNORD88.1-201ENST00000408684 91 ntBASIC2.73□□□□□ -1.97
SYNPOQ8N3V7 RN7SKP192-201ENST00000411291 327 ntBASIC2.73□□□□□ -1.97
SYNPOQ8N3V7 AL157709.1-201ENST00000412695 424 ntTSL 3 BASIC2.73□□□□□ -1.97
SYNPOQ8N3V7 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC2.73□□□□□ -1.97
SYNPOQ8N3V7 AC010154.1-201ENST00000425857 269 ntBASIC2.73□□□□□ -1.97
SYNPOQ8N3V7 AL353680.1-201ENST00000433788 337 ntTSL 3 BASIC2.73□□□□□ -1.97
SYNPOQ8N3V7 RPS15AP28-201ENST00000435088 386 ntBASIC2.73□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 149.2 ms