Protein–RNA interactions for Protein: Q6UWI4

SHISA2, Protein shisa-2 homolog, humanhuman

Predictions only

Length 295 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA2Q6UWI4 RNU7-99P-201ENST00000516271 62 ntBASIC3.19□□□□□ -1.9
SHISA2Q6UWI4 RNU6ATAC12P-201ENST00000516542 115 ntBASIC3.19□□□□□ -1.9
SHISA2Q6UWI4 RNU6-521P-201ENST00000516663 105 ntBASIC3.19□□□□□ -1.9
SHISA2Q6UWI4 RNU7-128P-201ENST00000517247 62 ntBASIC3.19□□□□□ -1.9
SHISA2Q6UWI4 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC3.19□□□□□ -1.9
SHISA2Q6UWI4 AC020891.1-201ENST00000558785 174 ntTSL 3 BASIC3.19□□□□□ -1.9
SHISA2Q6UWI4 AC022523.2-201ENST00000561045 150 ntBASIC3.19□□□□□ -1.9
SHISA2Q6UWI4 MIR3200-201ENST00000580767 85 ntBASIC3.19□□□□□ -1.9
SHISA2Q6UWI4 MIR3683-201ENST00000580847 82 ntBASIC3.19□□□□□ -1.9
SHISA2Q6UWI4 AC135178.3-204ENST00000585181 451 ntTSL 2 BASIC3.19□□□□□ -1.9
SHISA2Q6UWI4 AC006441.5-201ENST00000612680 209 ntBASIC3.19□□□□□ -1.9
SHISA2Q6UWI4 SNORA50A-202ENST00000629536 136 ntBASIC3.19□□□□□ -1.9
SHISA2Q6UWI4 MLH1-212ENST00000455445 2296 ntTSL 2 BASIC3.19□□□□□ -1.9
SHISA2Q6UWI4 RAB3C-201ENST00000282878 8896 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
SHISA2Q6UWI4 SCN3A-201ENST00000283254 9091 ntAPPRIS P3 TSL 1 (best) BASIC3.19□□□□□ -1.9
SHISA2Q6UWI4 AKT3-201ENST00000263826 7081 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
SHISA2Q6UWI4 OTOGL-202ENST00000458043 8083 ntAPPRIS P5 TSL 5 BASIC3.18□□□□□ -1.9
SHISA2Q6UWI4 DMD-230ENST00000620040 13746 ntAPPRIS ALT2 TSL 5 BASIC3.18□□□□□ -1.9
SHISA2Q6UWI4 RTKN2-202ENST00000373789 6641 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
SHISA2Q6UWI4 TMEM232-201ENST00000455884 2501 ntAPPRIS P2 TSL 2 BASIC3.18□□□□□ -1.9
SHISA2Q6UWI4 TSLP-202ENST00000379706 2411 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
SHISA2Q6UWI4 Y_RNA.244-201ENST00000364484 109 ntBASIC3.18□□□□□ -1.9
SHISA2Q6UWI4 RNU6-1276P-201ENST00000365372 104 ntBASIC3.18□□□□□ -1.9
SHISA2Q6UWI4 RNU6-1296P-201ENST00000383879 107 ntBASIC3.18□□□□□ -1.9
SHISA2Q6UWI4 MIR30B-201ENST00000384850 88 ntBASIC3.18□□□□□ -1.9
SHISA2Q6UWI4 RNU6-279P-201ENST00000391297 101 ntBASIC3.18□□□□□ -1.9
SHISA2Q6UWI4 RHOT1-204ENST00000394692 2960 ntTSL 2 BASIC3.18□□□□□ -1.9
SHISA2Q6UWI4 MIR1253-201ENST00000408273 105 ntBASIC3.18□□□□□ -1.9
SHISA2Q6UWI4 Z92545.1-201ENST00000411782 234 ntBASIC3.18□□□□□ -1.9
SHISA2Q6UWI4 RPS29P4-201ENST00000414733 161 ntBASIC3.18□□□□□ -1.9
SHISA2Q6UWI4 RNA5SP446-201ENST00000515955 82 ntBASIC3.18□□□□□ -1.9
SHISA2Q6UWI4 RNU6-586P-201ENST00000517265 104 ntBASIC3.18□□□□□ -1.9
SHISA2Q6UWI4 AC091544.4-201ENST00000555268 342 ntBASIC3.18□□□□□ -1.9
SHISA2Q6UWI4 AC007598.1-202ENST00000561528 435 ntTSL 3 BASIC3.18□□□□□ -1.9
SHISA2Q6UWI4 MIR4305-201ENST00000583252 102 ntBASIC3.18□□□□□ -1.9
SHISA2Q6UWI4 MIR5195-201ENST00000583555 115 ntBASIC3.18□□□□□ -1.9
SHISA2Q6UWI4 AC007229.1-201ENST00000590455 412 ntBASIC3.18□□□□□ -1.9
SHISA2Q6UWI4 U3.45-201ENST00000607547 219 ntBASIC3.18□□□□□ -1.9
SHISA2Q6UWI4 IGLL4P-201ENST00000614590 133 ntBASIC3.18□□□□□ -1.9
SHISA2Q6UWI4 MIR7151-201ENST00000617477 60 ntBASIC3.18□□□□□ -1.9
SHISA2Q6UWI4 MIR1248-201ENST00000629190 106 ntBASIC3.18□□□□□ -1.9
SHISA2Q6UWI4 SLC17A4-201ENST00000377905 3616 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
SHISA2Q6UWI4 GDAP2-202ENST00000369443 8828 ntAPPRIS P1 TSL 2 BASIC3.18□□□□□ -1.9
SHISA2Q6UWI4 FAP-201ENST00000188790 2780 ntAPPRIS P2 TSL 1 (best) BASIC3.17□□□□□ -1.9
SHISA2Q6UWI4 IL1RL1-204ENST00000409584 2693 ntTSL 5 BASIC3.17□□□□□ -1.9
SHISA2Q6UWI4 GLCE-202ENST00000559420 4840 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
SHISA2Q6UWI4 WNK3-202ENST00000375159 5403 ntAPPRIS P3 TSL 1 (best) BASIC3.17□□□□□ -1.9
SHISA2Q6UWI4 LCOR-204ENST00000371103 10342 ntAPPRIS P3 TSL 1 (best) BASIC3.17□□□□□ -1.9
SHISA2Q6UWI4 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
SHISA2Q6UWI4 ADAM28-201ENST00000265769 7052 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
SHISA2Q6UWI4 CNOT6L-201ENST00000504123 8843 ntAPPRIS P1 TSL 2 BASIC3.17□□□□□ -1.9
SHISA2Q6UWI4 RNA5SP97-201ENST00000365006 84 ntBASIC3.17□□□□□ -1.9
SHISA2Q6UWI4 RNU6-675P-201ENST00000384236 104 ntBASIC3.17□□□□□ -1.9
SHISA2Q6UWI4 RNU6-242P-201ENST00000384359 107 ntBASIC3.17□□□□□ -1.9
SHISA2Q6UWI4 RNA5SP252-201ENST00000391131 119 ntBASIC3.17□□□□□ -1.9
SHISA2Q6UWI4 AL451046.2-201ENST00000403074 277 ntBASIC3.17□□□□□ -1.9
SHISA2Q6UWI4 RPS15AP28-201ENST00000435088 386 ntBASIC3.17□□□□□ -1.9
SHISA2Q6UWI4 AC233266.1-201ENST00000454518 96 ntBASIC3.17□□□□□ -1.9
SHISA2Q6UWI4 RNU1-131P-201ENST00000458943 161 ntBASIC3.17□□□□□ -1.9
SHISA2Q6UWI4 SNORA59A-201ENST00000459326 152 ntBASIC3.17□□□□□ -1.9
SHISA2Q6UWI4 CFAP44-AS1-201ENST00000473329 396 ntTSL 2 BASIC3.17□□□□□ -1.9
SHISA2Q6UWI4 AC106707.2-201ENST00000484182 374 ntBASIC3.17□□□□□ -1.9
SHISA2Q6UWI4 RPL29P14-201ENST00000495837 428 ntBASIC3.17□□□□□ -1.9
SHISA2Q6UWI4 SNORA4.4-201ENST00000515921 135 ntBASIC3.17□□□□□ -1.9
SHISA2Q6UWI4 RNU6-341P-201ENST00000516973 96 ntBASIC3.17□□□□□ -1.9
SHISA2Q6UWI4 RNA5SP490-201ENST00000517141 136 ntBASIC3.17□□□□□ -1.9
SHISA2Q6UWI4 MIR4298-201ENST00000584380 73 ntBASIC3.17□□□□□ -1.9
SHISA2Q6UWI4 AL160290.3-201ENST00000604869 165 ntBASIC3.17□□□□□ -1.9
SHISA2Q6UWI4 AC242852.1-201ENST00000612151 96 ntBASIC3.17□□□□□ -1.9
SHISA2Q6UWI4 AC244015.1-201ENST00000622301 99 ntBASIC3.17□□□□□ -1.9
SHISA2Q6UWI4 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC3.17□□□□□ -1.9
SHISA2Q6UWI4 PTPN22-211ENST00000538253 3575 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
SHISA2Q6UWI4 AL049781.1-201ENST00000623195 3585 ntBASIC3.16□□□□□ -1.9
SHISA2Q6UWI4 FAM35CP-201ENST00000554755 2470 ntBASIC3.16□□□□□ -1.9
SHISA2Q6UWI4 SLITRK5-201ENST00000325089 21103 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
SHISA2Q6UWI4 TNNI3K-201ENST00000326637 3001 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
SHISA2Q6UWI4 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC3.16□□□□□ -1.9
SHISA2Q6UWI4 MIR126-201ENST00000362291 85 ntBASIC3.16□□□□□ -1.9
SHISA2Q6UWI4 RNA5SP322-201ENST00000363617 119 ntBASIC3.16□□□□□ -1.9
SHISA2Q6UWI4 RNU1-133P-201ENST00000364867 167 ntBASIC3.16□□□□□ -1.9
SHISA2Q6UWI4 RNU6-787P-201ENST00000384032 107 ntBASIC3.16□□□□□ -1.9
SHISA2Q6UWI4 MIR522-201ENST00000385071 87 ntBASIC3.16□□□□□ -1.9
SHISA2Q6UWI4 SNORA3.3-201ENST00000408712 125 ntBASIC3.16□□□□□ -1.9
SHISA2Q6UWI4 AL139247.1-201ENST00000422768 325 ntBASIC3.16□□□□□ -1.9
SHISA2Q6UWI4 AC093297.2-204ENST00000508945 295 ntTSL 3 BASIC3.16□□□□□ -1.9
SHISA2Q6UWI4 RNU2-13P-201ENST00000515909 113 ntBASIC3.16□□□□□ -1.9
SHISA2Q6UWI4 RNU6-1291P-201ENST00000516591 104 ntBASIC3.16□□□□□ -1.9
SHISA2Q6UWI4 RNU7-70P-201ENST00000516941 66 ntBASIC3.16□□□□□ -1.9
SHISA2Q6UWI4 CNTN5-209ENST00000528682 3800 ntAPPRIS P4 TSL 5 BASIC3.16□□□□□ -1.9
SHISA2Q6UWI4 AP001458.1-201ENST00000532626 92 ntTSL 3 BASIC3.16□□□□□ -1.9
SHISA2Q6UWI4 AL360270.1-201ENST00000440689 2359 ntTSL 2 BASIC3.16□□□□□ -1.9
SHISA2Q6UWI4 DNAJC10-201ENST00000264065 20129 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.9
SHISA2Q6UWI4 PWAR6-201ENST00000552334 4618 ntBASIC3.15□□□□□ -1.91
SHISA2Q6UWI4 CHM-205ENST00000615443 2821 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
SHISA2Q6UWI4 Y_RNA.37-201ENST00000362606 108 ntBASIC3.15□□□□□ -1.91
SHISA2Q6UWI4 SNORD115-28-201ENST00000363931 81 ntBASIC3.15□□□□□ -1.91
SHISA2Q6UWI4 RNA5SP151-201ENST00000365632 117 ntBASIC3.15□□□□□ -1.91
SHISA2Q6UWI4 Y_RNA.440-201ENST00000384120 114 ntBASIC3.15□□□□□ -1.91
SHISA2Q6UWI4 RNU1-44P-201ENST00000384453 163 ntBASIC3.15□□□□□ -1.91
SHISA2Q6UWI4 AC004941.2-201ENST00000427009 228 ntBASIC3.15□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 105.4 ms