Protein–RNA interactions for Protein: Q6IN85

PPP4R3A, Serine/threonine-protein phosphatase 4 regulatory subunit 3A, humanhuman

Predictions only

Length 833 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3AQ6IN85 AC025647.1-201ENST00000517879 253 ntBASIC2.6□□□□□ -1.99
PPP4R3AQ6IN85 SNORD53-201ENST00000579969 78 ntBASIC2.6□□□□□ -1.99
PPP4R3AQ6IN85 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC2.6□□□□□ -1.99
PPP4R3AQ6IN85 SNORA25.1-201ENST00000362326 128 ntBASIC2.59□□□□□ -1.99
PPP4R3AQ6IN85 Y_RNA.243-201ENST00000364481 109 ntBASIC2.59□□□□□ -1.99
PPP4R3AQ6IN85 RNU6-326P-201ENST00000365480 107 ntBASIC2.59□□□□□ -1.99
PPP4R3AQ6IN85 AL355796.1-201ENST00000406706 323 ntBASIC2.59□□□□□ -1.99
PPP4R3AQ6IN85 AL603910.2-201ENST00000407268 136 ntBASIC2.59□□□□□ -1.99
PPP4R3AQ6IN85 SRIP3-201ENST00000413200 219 ntBASIC2.59□□□□□ -1.99
PPP4R3AQ6IN85 AC016909.1-201ENST00000415916 166 ntBASIC2.59□□□□□ -1.99
PPP4R3AQ6IN85 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC2.59□□□□□ -1.99
PPP4R3AQ6IN85 SNORD65B-201ENST00000459126 73 ntBASIC2.59□□□□□ -1.99
PPP4R3AQ6IN85 RNA5SP281-201ENST00000516504 135 ntBASIC2.59□□□□□ -1.99
PPP4R3AQ6IN85 AC107973.1-201ENST00000530249 576 ntTSL 4 BASIC2.59□□□□□ -1.99
PPP4R3AQ6IN85 MIR3124-201ENST00000582636 67 ntBASIC2.59□□□□□ -1.99
PPP4R3AQ6IN85 AC037487.3-201ENST00000606668 112 ntBASIC2.59□□□□□ -1.99
PPP4R3AQ6IN85 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC2.58□□□□□ -2
PPP4R3AQ6IN85 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
PPP4R3AQ6IN85 Y_RNA.124-201ENST00000363339 93 ntBASIC2.58□□□□□ -2
PPP4R3AQ6IN85 RNU6-379P-201ENST00000363813 104 ntBASIC2.58□□□□□ -2
PPP4R3AQ6IN85 RNU1-51P-201ENST00000365345 176 ntBASIC2.58□□□□□ -2
PPP4R3AQ6IN85 SNORA20B-201ENST00000384220 132 ntBASIC2.58□□□□□ -2
PPP4R3AQ6IN85 AL357134.1-201ENST00000445848 426 ntBASIC2.58□□□□□ -2
PPP4R3AQ6IN85 AC245102.2-201ENST00000448956 180 ntBASIC2.58□□□□□ -2
PPP4R3AQ6IN85 SNORA31.25-201ENST00000517242 134 ntBASIC2.58□□□□□ -2
PPP4R3AQ6IN85 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC2.58□□□□□ -2
PPP4R3AQ6IN85 AC007229.1-201ENST00000590455 412 ntBASIC2.58□□□□□ -2
PPP4R3AQ6IN85 MIR6895-201ENST00000613497 78 ntBASIC2.58□□□□□ -2
PPP4R3AQ6IN85 AC026523.1-201ENST00000617221 490 ntTSL 5 BASIC2.58□□□□□ -2
PPP4R3AQ6IN85 AC064859.1-201ENST00000624741 174 ntBASIC2.58□□□□□ -2
PPP4R3AQ6IN85 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
PPP4R3AQ6IN85 AC005336.3-201ENST00000623833 2679 ntBASIC2.57□□□□□ -2
PPP4R3AQ6IN85 RNU6-1266P-201ENST00000362794 105 ntBASIC2.57□□□□□ -2
PPP4R3AQ6IN85 Y_RNA.99-201ENST00000363138 105 ntBASIC2.57□□□□□ -2
PPP4R3AQ6IN85 Y_RNA.277-201ENST00000364754 102 ntBASIC2.57□□□□□ -2
PPP4R3AQ6IN85 RNU6-514P-201ENST00000384208 107 ntBASIC2.57□□□□□ -2
PPP4R3AQ6IN85 Y_RNA.476-201ENST00000384347 108 ntBASIC2.57□□□□□ -2
PPP4R3AQ6IN85 AC060773.1-201ENST00000421698 310 ntBASIC2.57□□□□□ -2
PPP4R3AQ6IN85 AL121890.1-201ENST00000435457 205 ntBASIC2.57□□□□□ -2
PPP4R3AQ6IN85 RNU6-388P-201ENST00000517012 105 ntBASIC2.57□□□□□ -2
PPP4R3AQ6IN85 RNU6-389P-201ENST00000517048 105 ntBASIC2.57□□□□□ -2
PPP4R3AQ6IN85 AC090425.1-201ENST00000610007 140 ntBASIC2.57□□□□□ -2
PPP4R3AQ6IN85 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
PPP4R3AQ6IN85 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC2.56□□□□□ -2
PPP4R3AQ6IN85 RNA5SP126-201ENST00000365092 109 ntBASIC2.56□□□□□ -2
PPP4R3AQ6IN85 RNU6-662P-201ENST00000384253 104 ntBASIC2.56□□□□□ -2
PPP4R3AQ6IN85 RNU6-301P-201ENST00000384277 107 ntBASIC2.56□□□□□ -2
PPP4R3AQ6IN85 MT-TG-201ENST00000387429 68 ntBASIC2.56□□□□□ -2
PPP4R3AQ6IN85 AL356320.1-201ENST00000429616 163 ntBASIC2.56□□□□□ -2
PPP4R3AQ6IN85 AC091959.1-201ENST00000495857 238 ntBASIC2.56□□□□□ -2
PPP4R3AQ6IN85 RNU2-34P-201ENST00000516534 121 ntBASIC2.56□□□□□ -2
PPP4R3AQ6IN85 RNU6-856P-201ENST00000516959 98 ntBASIC2.56□□□□□ -2
PPP4R3AQ6IN85 AL159152.1-201ENST00000635019 2587 ntBASIC2.55□□□□□ -2
PPP4R3AQ6IN85 Y_RNA.136-201ENST00000363444 102 ntBASIC2.55□□□□□ -2
PPP4R3AQ6IN85 SNORA20.1-201ENST00000364790 130 ntBASIC2.55□□□□□ -2
PPP4R3AQ6IN85 RNU6-1240P-201ENST00000365155 104 ntBASIC2.55□□□□□ -2
PPP4R3AQ6IN85 RNU6-407P-201ENST00000365280 104 ntBASIC2.55□□□□□ -2
PPP4R3AQ6IN85 Y_RNA.352-201ENST00000365439 102 ntBASIC2.55□□□□□ -2
PPP4R3AQ6IN85 Y_RNA.416-201ENST00000384014 113 ntBASIC2.55□□□□□ -2
PPP4R3AQ6IN85 Y_RNA.489-201ENST00000384410 101 ntBASIC2.55□□□□□ -2
PPP4R3AQ6IN85 HMGN2P39-201ENST00000398005 273 ntBASIC2.55□□□□□ -2
PPP4R3AQ6IN85 AL355497.1-201ENST00000406262 551 ntBASIC2.55□□□□□ -2
PPP4R3AQ6IN85 MIR548H3-201ENST00000408771 118 ntBASIC2.55□□□□□ -2
PPP4R3AQ6IN85 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC2.55□□□□□ -2
PPP4R3AQ6IN85 RNU6-1041P-201ENST00000516254 102 ntBASIC2.55□□□□□ -2
PPP4R3AQ6IN85 RNU2-19P-201ENST00000517288 84 ntBASIC2.55□□□□□ -2
PPP4R3AQ6IN85 MIR4643-201ENST00000577473 78 ntBASIC2.55□□□□□ -2
PPP4R3AQ6IN85 AC100781.1-201ENST00000597142 383 ntTSL 3 BASIC2.55□□□□□ -2
PPP4R3AQ6IN85 AC005828.6-201ENST00000606610 232 ntBASIC2.55□□□□□ -2
PPP4R3AQ6IN85 U2.14-201ENST00000615943 113 ntBASIC2.55□□□□□ -2
PPP4R3AQ6IN85 AC009831.4-201ENST00000620744 325 ntBASIC2.55□□□□□ -2
PPP4R3AQ6IN85 AC078938.1-201ENST00000620993 318 ntBASIC2.55□□□□□ -2
PPP4R3AQ6IN85 MIR6873-201ENST00000622788 63 ntBASIC2.55□□□□□ -2
PPP4R3AQ6IN85 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC2.55□□□□□ -2
PPP4R3AQ6IN85 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC2.55□□□□□ -2
PPP4R3AQ6IN85 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC2.54□□□□□ -2
PPP4R3AQ6IN85 Y_RNA.44-201ENST00000362676 108 ntBASIC2.54□□□□□ -2
PPP4R3AQ6IN85 Y_RNA.65-201ENST00000362846 100 ntBASIC2.54□□□□□ -2
PPP4R3AQ6IN85 Y_RNA.117-201ENST00000363294 101 ntBASIC2.54□□□□□ -2
PPP4R3AQ6IN85 RNU6-160P-201ENST00000384591 107 ntBASIC2.54□□□□□ -2
PPP4R3AQ6IN85 MIR29C-201ENST00000385231 88 ntBASIC2.54□□□□□ -2
PPP4R3AQ6IN85 RNA5SP425-201ENST00000410336 112 ntBASIC2.54□□□□□ -2
PPP4R3AQ6IN85 RNU6-651P-201ENST00000411040 105 ntBASIC2.54□□□□□ -2
PPP4R3AQ6IN85 AC008134.1-201ENST00000420943 193 ntBASIC2.54□□□□□ -2
PPP4R3AQ6IN85 LINC01766-201ENST00000453968 362 ntTSL 3 BASIC2.54□□□□□ -2
PPP4R3AQ6IN85 AC055731.1-201ENST00000474387 401 ntBASIC2.54□□□□□ -2
PPP4R3AQ6IN85 TRBV12-1-201ENST00000479785 344 ntBASIC2.54□□□□□ -2
PPP4R3AQ6IN85 AC010598.1-201ENST00000510378 103 ntBASIC2.54□□□□□ -2
PPP4R3AQ6IN85 RNU6-1023P-201ENST00000516137 106 ntBASIC2.54□□□□□ -2
PPP4R3AQ6IN85 RNU6-191P-201ENST00000516295 94 ntBASIC2.54□□□□□ -2
PPP4R3AQ6IN85 AC087441.2-201ENST00000529141 262 ntBASIC2.54□□□□□ -2
PPP4R3AQ6IN85 AC091544.4-201ENST00000555268 342 ntBASIC2.54□□□□□ -2
PPP4R3AQ6IN85 AL512605.2-201ENST00000592972 256 ntBASIC2.54□□□□□ -2
PPP4R3AQ6IN85 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC2.54□□□□□ -2
PPP4R3AQ6IN85 RNU6-1164P-201ENST00000364428 107 ntBASIC2.53□□□□□ -2
PPP4R3AQ6IN85 RNU6-740P-201ENST00000364734 105 ntBASIC2.53□□□□□ -2
PPP4R3AQ6IN85 Y_RNA.539-201ENST00000384635 107 ntBASIC2.53□□□□□ -2
PPP4R3AQ6IN85 MIR144-201ENST00000384886 86 ntBASIC2.53□□□□□ -2
PPP4R3AQ6IN85 MIR221-201ENST00000385135 110 ntBASIC2.53□□□□□ -2
PPP4R3AQ6IN85 MIR1253-201ENST00000408273 105 ntBASIC2.53□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 10.9 ms