Protein–RNA interactions for Protein: Q5W0Q7

USPL1, SUMO-specific isopeptidase USPL1, humanhuman

Predictions only

Length 1,092 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USPL1Q5W0Q7 AC090616.3-201ENST00000582184 217 ntBASIC3.56□□□□□ -1.84
USPL1Q5W0Q7 AC005972.2-201ENST00000604690 348 ntBASIC3.56□□□□□ -1.84
USPL1Q5W0Q7 AC068647.2-201ENST00000637380 353 ntBASIC3.56□□□□□ -1.84
USPL1Q5W0Q7 ERBIN-204ENST00000380943 6410 ntAPPRIS P3 TSL 1 (best) BASIC3.56□□□□□ -1.84
USPL1Q5W0Q7 PALMD-205ENST00000615664 1844 ntTSL 5 BASIC3.56□□□□□ -1.84
USPL1Q5W0Q7 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC3.55□□□□□ -1.84
USPL1Q5W0Q7 RNA5SP68-201ENST00000363885 119 ntBASIC3.55□□□□□ -1.84
USPL1Q5W0Q7 RNU6-728P-201ENST00000365375 104 ntBASIC3.55□□□□□ -1.84
USPL1Q5W0Q7 MIR9-1-201ENST00000385198 89 ntBASIC3.55□□□□□ -1.84
USPL1Q5W0Q7 MIR569-201ENST00000385228 96 ntBASIC3.55□□□□□ -1.84
USPL1Q5W0Q7 Y_RNA.586-201ENST00000391146 98 ntBASIC3.55□□□□□ -1.84
USPL1Q5W0Q7 SNORA36B-201ENST00000410438 131 ntBASIC3.55□□□□□ -1.84
USPL1Q5W0Q7 RNU6-57P-201ENST00000411348 103 ntBASIC3.55□□□□□ -1.84
USPL1Q5W0Q7 RPL30P4-201ENST00000429309 333 ntBASIC3.55□□□□□ -1.84
USPL1Q5W0Q7 AC091133.1-201ENST00000435491 483 ntTSL 3 BASIC3.55□□□□□ -1.84
USPL1Q5W0Q7 AC009969.1-201ENST00000438726 172 ntBASIC3.55□□□□□ -1.84
USPL1Q5W0Q7 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC3.55□□□□□ -1.84
USPL1Q5W0Q7 AC080013.2-201ENST00000460866 323 ntBASIC3.55□□□□□ -1.84
USPL1Q5W0Q7 ATP5EP1-201ENST00000510257 156 ntBASIC3.55□□□□□ -1.84
USPL1Q5W0Q7 AC008413.1-201ENST00000511864 177 ntBASIC3.55□□□□□ -1.84
USPL1Q5W0Q7 AC105245.1-201ENST00000581934 244 ntBASIC3.55□□□□□ -1.84
USPL1Q5W0Q7 MIR5739-201ENST00000619803 80 ntBASIC3.55□□□□□ -1.84
USPL1Q5W0Q7 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
USPL1Q5W0Q7 NDST3-201ENST00000296499 5961 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
USPL1Q5W0Q7 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC3.54□□□□□ -1.84
USPL1Q5W0Q7 VNN1-201ENST00000367928 3106 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
USPL1Q5W0Q7 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC3.54□□□□□ -1.84
USPL1Q5W0Q7 RNU6-438P-201ENST00000365561 103 ntBASIC3.54□□□□□ -1.84
USPL1Q5W0Q7 RNU6-22P-201ENST00000384355 107 ntBASIC3.54□□□□□ -1.84
USPL1Q5W0Q7 MIR887-201ENST00000401258 79 ntBASIC3.54□□□□□ -1.84
USPL1Q5W0Q7 MIR513C-201ENST00000401352 84 ntBASIC3.54□□□□□ -1.84
USPL1Q5W0Q7 RPL30P13-201ENST00000418873 348 ntBASIC3.54□□□□□ -1.84
USPL1Q5W0Q7 AL121914.1-201ENST00000450188 156 ntBASIC3.54□□□□□ -1.84
USPL1Q5W0Q7 AC245047.8-201ENST00000456455 284 ntBASIC3.54□□□□□ -1.84
USPL1Q5W0Q7 CYP2C59P-201ENST00000457790 269 ntBASIC3.54□□□□□ -1.84
USPL1Q5W0Q7 RNU6-453P-201ENST00000516819 85 ntBASIC3.54□□□□□ -1.84
USPL1Q5W0Q7 AC127455.1-201ENST00000565496 145 ntBASIC3.54□□□□□ -1.84
USPL1Q5W0Q7 SLC8A1-207ENST00000406785 20987 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
USPL1Q5W0Q7 RNU6-643P-201ENST00000384018 107 ntBASIC3.53□□□□□ -1.84
USPL1Q5W0Q7 Y_RNA.572-201ENST00000384757 98 ntBASIC3.53□□□□□ -1.84
USPL1Q5W0Q7 RNU6ATAC40P-201ENST00000408580 137 ntBASIC3.53□□□□□ -1.84
USPL1Q5W0Q7 RNA5SP21-201ENST00000410917 96 ntBASIC3.53□□□□□ -1.84
USPL1Q5W0Q7 RPS29P6-201ENST00000438196 145 ntBASIC3.53□□□□□ -1.84
USPL1Q5W0Q7 AC117454.1-201ENST00000491120 168 ntBASIC3.53□□□□□ -1.84
USPL1Q5W0Q7 RNA5SP20-201ENST00000515976 84 ntBASIC3.53□□□□□ -1.84
USPL1Q5W0Q7 AC025647.1-201ENST00000517879 253 ntBASIC3.53□□□□□ -1.84
USPL1Q5W0Q7 AC093331.1-201ENST00000521474 169 ntBASIC3.53□□□□□ -1.84
USPL1Q5W0Q7 MIR6817-201ENST00000615588 66 ntBASIC3.53□□□□□ -1.84
USPL1Q5W0Q7 AL590808.1-201ENST00000618696 141 ntBASIC3.53□□□□□ -1.84
USPL1Q5W0Q7 PIK3C2G-201ENST00000266497 4764 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
USPL1Q5W0Q7 RNF219-AS1-214ENST00000607862 6001 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
USPL1Q5W0Q7 CCPG1-203ENST00000442196 3453 ntAPPRIS P1 TSL 2 BASIC3.53□□□□□ -1.84
USPL1Q5W0Q7 NEB-218ENST00000603639 25578 ntAPPRIS ALT2 TSL 5 BASIC3.52□□□□□ -1.85
USPL1Q5W0Q7 NEB-219ENST00000604864 25578 ntAPPRIS ALT2 TSL 5 BASIC3.52□□□□□ -1.85
USPL1Q5W0Q7 MAPK10-362ENST00000641864 4484 ntBASIC3.52□□□□□ -1.85
USPL1Q5W0Q7 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC3.52□□□□□ -1.85
USPL1Q5W0Q7 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
USPL1Q5W0Q7 Y_RNA.172-201ENST00000363765 102 ntBASIC3.52□□□□□ -1.85
USPL1Q5W0Q7 SNORA68.1-201ENST00000364537 132 ntBASIC3.52□□□□□ -1.85
USPL1Q5W0Q7 SNORD50B-201ENST00000364995 70 ntBASIC3.52□□□□□ -1.85
USPL1Q5W0Q7 RNU6-407P-201ENST00000365280 104 ntBASIC3.52□□□□□ -1.85
USPL1Q5W0Q7 SNORD14D-201ENST00000384390 87 ntBASIC3.52□□□□□ -1.85
USPL1Q5W0Q7 SNORA67.4-201ENST00000384688 142 ntBASIC3.52□□□□□ -1.85
USPL1Q5W0Q7 MIR15B-201ENST00000385045 98 ntBASIC3.52□□□□□ -1.85
USPL1Q5W0Q7 RNA5SP496-201ENST00000391240 109 ntBASIC3.52□□□□□ -1.85
USPL1Q5W0Q7 AL606845.1-201ENST00000404881 255 ntBASIC3.52□□□□□ -1.85
USPL1Q5W0Q7 RNU4-43P-201ENST00000410628 137 ntBASIC3.52□□□□□ -1.85
USPL1Q5W0Q7 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC3.52□□□□□ -1.85
USPL1Q5W0Q7 RNU6-426P-201ENST00000516464 97 ntBASIC3.52□□□□□ -1.85
USPL1Q5W0Q7 RNA5SP148-201ENST00000516527 94 ntBASIC3.52□□□□□ -1.85
USPL1Q5W0Q7 MIR3646-201ENST00000578301 84 ntBASIC3.52□□□□□ -1.85
USPL1Q5W0Q7 POLR3GP1-201ENST00000594073 261 ntBASIC3.52□□□□□ -1.85
USPL1Q5W0Q7 MIR7515-201ENST00000637837 67 ntBASIC3.52□□□□□ -1.85
USPL1Q5W0Q7 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC3.52□□□□□ -1.85
USPL1Q5W0Q7 ZBTB20-201ENST00000357258 27125 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
USPL1Q5W0Q7 ARHGAP5-202ENST00000345122 9604 ntAPPRIS P3 TSL 5 BASIC3.51□□□□□ -1.85
USPL1Q5W0Q7 GRAMD1C-202ENST00000440446 3475 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
USPL1Q5W0Q7 AC010332.2-201ENST00000613083 1904 ntBASIC3.51□□□□□ -1.85
USPL1Q5W0Q7 RNU6-674P-201ENST00000363831 107 ntBASIC3.51□□□□□ -1.85
USPL1Q5W0Q7 RNU6-1240P-201ENST00000365155 104 ntBASIC3.51□□□□□ -1.85
USPL1Q5W0Q7 RNU6-546P-201ENST00000383991 107 ntBASIC3.51□□□□□ -1.85
USPL1Q5W0Q7 MIR95-201ENST00000385072 81 ntBASIC3.51□□□□□ -1.85
USPL1Q5W0Q7 SNORA40-201ENST00000388090 126 ntBASIC3.51□□□□□ -1.85
USPL1Q5W0Q7 AL135786.1-201ENST00000415892 214 ntBASIC3.51□□□□□ -1.85
USPL1Q5W0Q7 AC012312.1-201ENST00000503710 527 ntTSL 2 BASIC3.51□□□□□ -1.85
USPL1Q5W0Q7 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC3.51□□□□□ -1.85
USPL1Q5W0Q7 RNU6-313P-201ENST00000516317 112 ntBASIC3.51□□□□□ -1.85
USPL1Q5W0Q7 RNA5SP380-201ENST00000517190 98 ntBASIC3.51□□□□□ -1.85
USPL1Q5W0Q7 5S_rRNA.13-201ENST00000622298 123 ntBASIC3.51□□□□□ -1.85
USPL1Q5W0Q7 EXOC6-203ENST00000371552 3564 ntTSL 5 BASIC3.51□□□□□ -1.85
USPL1Q5W0Q7 AC093725.1-201ENST00000508135 2672 ntTSL 5 BASIC3.5□□□□□ -1.85
USPL1Q5W0Q7 MUM1L1-203ENST00000372552 3957 ntAPPRIS P1 TSL 5 BASIC3.5□□□□□ -1.85
USPL1Q5W0Q7 CENPCP1-201ENST00000533085 2578 ntBASIC3.5□□□□□ -1.85
USPL1Q5W0Q7 DST-204ENST00000361203 22431 ntAPPRIS ALT2 TSL 5 BASIC3.5□□□□□ -1.85
USPL1Q5W0Q7 RNU6-199P-201ENST00000362954 107 ntBASIC3.5□□□□□ -1.85
USPL1Q5W0Q7 RNU4-11P-201ENST00000365287 132 ntBASIC3.5□□□□□ -1.85
USPL1Q5W0Q7 SNORA70B-201ENST00000384210 135 ntBASIC3.5□□□□□ -1.85
USPL1Q5W0Q7 SNORD116-13-201ENST00000384408 92 ntBASIC3.5□□□□□ -1.85
USPL1Q5W0Q7 AL512604.1-201ENST00000404812 257 ntBASIC3.5□□□□□ -1.85
USPL1Q5W0Q7 RNU6-1328P-201ENST00000410938 106 ntBASIC3.5□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 100.2 ms