Protein–RNA interactions for Protein: Q53F19

NCBP3, Nuclear cap-binding protein subunit 3, humanhuman

Known RBP Predictions only

Length 620 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCBP3Q53F19 TRAJ42-201ENST00000390495 66 ntAPPRIS P1 BASIC5.97□□□□□ -1.45
NCBP3Q53F19 Z98742.3-201ENST00000418637 326 ntBASIC5.97□□□□□ -1.45
NCBP3Q53F19 MICF-203ENST00000432679 129 ntBASIC5.97□□□□□ -1.45
NCBP3Q53F19 STAG3L5P-204ENST00000443759 179 ntBASIC5.97□□□□□ -1.45
NCBP3Q53F19 MIR6810-201ENST00000622701 70 ntBASIC5.97□□□□□ -1.45
NCBP3Q53F19 CEP170P1-201ENST00000502249 4587 ntBASIC5.97□□□□□ -1.45
NCBP3Q53F19 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC5.97□□□□□ -1.45
NCBP3Q53F19 ARHGAP15-202ENST00000409869 2968 ntTSL 5 BASIC5.97□□□□□ -1.45
NCBP3Q53F19 SYCP1-210ENST00000618516 3109 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.45
NCBP3Q53F19 RAD17-202ENST00000305138 3164 ntTSL 1 (best) BASIC5.96□□□□□ -1.45
NCBP3Q53F19 ATP8B4-211ENST00000559829 4894 ntAPPRIS P1 TSL 5 BASIC5.96□□□□□ -1.45
NCBP3Q53F19 RNU1-94P-201ENST00000362627 173 ntBASIC5.96□□□□□ -1.46
NCBP3Q53F19 RNU6-315P-201ENST00000362666 107 ntBASIC5.96□□□□□ -1.46
NCBP3Q53F19 RNU6-862P-201ENST00000362804 105 ntBASIC5.96□□□□□ -1.46
NCBP3Q53F19 SNORA71.2-201ENST00000364941 134 ntBASIC5.96□□□□□ -1.46
NCBP3Q53F19 RNU6-613P-201ENST00000410412 108 ntBASIC5.96□□□□□ -1.46
NCBP3Q53F19 AC110741.2-201ENST00000605278 268 ntBASIC5.96□□□□□ -1.46
NCBP3Q53F19 MIR7703-201ENST00000620784 77 ntBASIC5.96□□□□□ -1.46
NCBP3Q53F19 STON1-GTF2A1L-201ENST00000394751 3534 ntTSL 2 BASIC5.96□□□□□ -1.46
NCBP3Q53F19 NOC3L-201ENST00000371361 3455 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
NCBP3Q53F19 PEAK1-204ENST00000560626 19217 ntAPPRIS P1 TSL 5 BASIC5.95□□□□□ -1.46
NCBP3Q53F19 ZNF117-201ENST00000282869 9080 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
NCBP3Q53F19 NCOA1-202ENST00000348332 6895 ntAPPRIS P4 TSL 1 (best) BASIC5.95□□□□□ -1.46
NCBP3Q53F19 ESCO1-201ENST00000269214 4523 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
NCBP3Q53F19 NAIP-210ENST00000523981 4543 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
NCBP3Q53F19 TANK-201ENST00000259075 2152 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
NCBP3Q53F19 RNA5SP261-201ENST00000410536 106 ntBASIC5.95□□□□□ -1.46
NCBP3Q53F19 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC5.95□□□□□ -1.46
NCBP3Q53F19 RNU7-67P-201ENST00000459003 62 ntBASIC5.95□□□□□ -1.46
NCBP3Q53F19 SNORA48.11-201ENST00000517015 89 ntBASIC5.95□□□□□ -1.46
NCBP3Q53F19 RN7SL176P-201ENST00000580352 264 ntBASIC5.95□□□□□ -1.46
NCBP3Q53F19 AL136164.3-201ENST00000624429 3978 ntBASIC5.95□□□□□ -1.46
NCBP3Q53F19 MIR7515-201ENST00000637837 67 ntBASIC5.95□□□□□ -1.46
NCBP3Q53F19 SLC17A4-201ENST00000377905 3616 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
NCBP3Q53F19 CDC23-202ENST00000394886 3155 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
NCBP3Q53F19 LIMA1-214ENST00000552783 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC5.94□□□□□ -1.46
NCBP3Q53F19 MARCH7-202ENST00000409175 2402 ntAPPRIS P1 TSL 2 BASIC5.94□□□□□ -1.46
NCBP3Q53F19 MIR34C-201ENST00000384831 77 ntBASIC5.94□□□□□ -1.46
NCBP3Q53F19 MIR129-1-201ENST00000384972 72 ntBASIC5.94□□□□□ -1.46
NCBP3Q53F19 TRAJ61-201ENST00000390479 60 ntAPPRIS P1 BASIC5.94□□□□□ -1.46
NCBP3Q53F19 CYCSP35-201ENST00000451978 304 ntBASIC5.94□□□□□ -1.46
NCBP3Q53F19 RN7SL354P-201ENST00000469282 294 ntBASIC5.94□□□□□ -1.46
NCBP3Q53F19 RNA5SP464-201ENST00000516251 108 ntBASIC5.94□□□□□ -1.46
NCBP3Q53F19 RNU6-667P-201ENST00000517186 102 ntBASIC5.94□□□□□ -1.46
NCBP3Q53F19 AP000346.3-201ENST00000622821 210 ntBASIC5.94□□□□□ -1.46
NCBP3Q53F19 BBX-204ENST00000406780 3674 ntAPPRIS P3 TSL 5 BASIC5.94□□□□□ -1.46
NCBP3Q53F19 RBMS3-205ENST00000434693 8540 ntTSL 5 BASIC5.94□□□□□ -1.46
NCBP3Q53F19 HMCN1-201ENST00000271588 18208 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
NCBP3Q53F19 NDST3-201ENST00000296499 5961 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
NCBP3Q53F19 ATP2C1-212ENST00000507488 3579 ntAPPRIS ALT2 TSL 2 BASIC5.94□□□□□ -1.46
NCBP3Q53F19 FAM135A-210ENST00000505868 5173 ntTSL 5 BASIC5.94□□□□□ -1.46
NCBP3Q53F19 TNPO1P3-201ENST00000436471 2662 ntBASIC5.93□□□□□ -1.46
NCBP3Q53F19 SCN1A-210ENST00000635776 10107 ntTSL 5 BASIC5.93□□□□□ -1.46
NCBP3Q53F19 PCDH15-206ENST00000373965 9237 ntAPPRIS ALT2 TSL 5 BASIC5.93□□□□□ -1.46
NCBP3Q53F19 MIR192-201ENST00000384915 110 ntBASIC5.93□□□□□ -1.46
NCBP3Q53F19 MIR592-201ENST00000384959 97 ntBASIC5.93□□□□□ -1.46
NCBP3Q53F19 MIR659-201ENST00000384963 97 ntBASIC5.93□□□□□ -1.46
NCBP3Q53F19 SNORA26.6-201ENST00000391256 115 ntBASIC5.93□□□□□ -1.46
NCBP3Q53F19 RN7SKP111-201ENST00000410349 271 ntBASIC5.93□□□□□ -1.46
NCBP3Q53F19 RNU7-53P-201ENST00000516705 60 ntBASIC5.93□□□□□ -1.46
NCBP3Q53F19 RNU6-826P-201ENST00000516827 104 ntBASIC5.93□□□□□ -1.46
NCBP3Q53F19 MIR4791-201ENST00000607666 84 ntBASIC5.93□□□□□ -1.46
NCBP3Q53F19 AC110079.1-202ENST00000635213 138 ntBASIC5.93□□□□□ -1.46
NCBP3Q53F19 OSTN-202ENST00000445281 3134 ntTSL 5 BASIC5.93□□□□□ -1.46
NCBP3Q53F19 SPEF2-216ENST00000637569 7350 ntAPPRIS ALT2 TSL 5 BASIC5.93□□□□□ -1.46
NCBP3Q53F19 CEP192-203ENST00000506447 7960 ntAPPRIS P2 TSL 5 BASIC5.93□□□□□ -1.46
NCBP3Q53F19 RAG2-209ENST00000618712 2818 ntAPPRIS P1 TSL 4 BASIC5.93□□□□□ -1.46
NCBP3Q53F19 DNAH6-202ENST00000389394 12795 ntAPPRIS P1 TSL 5 BASIC5.92□□□□□ -1.46
NCBP3Q53F19 KIAA0586-215ENST00000619722 5597 ntAPPRIS ALT2 TSL 2 BASIC5.92□□□□□ -1.46
NCBP3Q53F19 PTPRD-201ENST00000355233 8251 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
NCBP3Q53F19 C1orf112-202ENST00000359326 4002 ntAPPRIS P3 TSL 1 (best) BASIC5.92□□□□□ -1.46
NCBP3Q53F19 SNORA70.7-201ENST00000384159 133 ntBASIC5.92□□□□□ -1.46
NCBP3Q53F19 MIR206-201ENST00000384872 86 ntBASIC5.92□□□□□ -1.46
NCBP3Q53F19 RNU6-1307P-201ENST00000391012 103 ntBASIC5.92□□□□□ -1.46
NCBP3Q53F19 MIR548G-201ENST00000408442 89 ntBASIC5.92□□□□□ -1.46
NCBP3Q53F19 RNU6-1190P-201ENST00000410811 104 ntBASIC5.92□□□□□ -1.46
NCBP3Q53F19 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC5.92□□□□□ -1.46
NCBP3Q53F19 uc_338.13-201ENST00000618243 179 ntBASIC5.92□□□□□ -1.46
NCBP3Q53F19 MIR6717-201ENST00000622747 73 ntBASIC5.92□□□□□ -1.46
NCBP3Q53F19 U2SURP-208ENST00000473835 7276 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
NCBP3Q53F19 ZNF468-203ENST00000595646 4407 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
NCBP3Q53F19 SNORD96B-201ENST00000386148 79 ntBASIC5.91□□□□□ -1.46
NCBP3Q53F19 RNA5SP109-201ENST00000391010 116 ntBASIC5.91□□□□□ -1.46
NCBP3Q53F19 RNU6-129P-201ENST00000391022 107 ntBASIC5.91□□□□□ -1.46
NCBP3Q53F19 DNAJC19P9-201ENST00000555084 351 ntBASIC5.91□□□□□ -1.46
NCBP3Q53F19 AL356280.1-201ENST00000603614 379 ntBASIC5.91□□□□□ -1.46
NCBP3Q53F19 RNU6-90P-201ENST00000606352 106 ntBASIC5.91□□□□□ -1.46
NCBP3Q53F19 AC245427.9-201ENST00000633713 53 ntAPPRIS P1 BASIC5.91□□□□□ -1.46
NCBP3Q53F19 ADGRG2-201ENST00000340581 3594 ntTSL 2 BASIC5.91□□□□□ -1.46
NCBP3Q53F19 ZNF680-202ENST00000447137 2159 ntTSL 2 BASIC5.91□□□□□ -1.46
NCBP3Q53F19 TLR3-201ENST00000296795 6015 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
NCBP3Q53F19 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
NCBP3Q53F19 AL513043.2-201ENST00000573941 143 ntBASIC5.9□□□□□ -1.46
NCBP3Q53F19 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC5.9□□□□□ -1.46
NCBP3Q53F19 MAPK10-320ENST00000641462 6696 ntBASIC5.9□□□□□ -1.47
NCBP3Q53F19 CCDC141-202ENST00000409284 6960 ntAPPRIS P2 TSL 1 (best) BASIC5.9□□□□□ -1.47
NCBP3Q53F19 NEDD4-201ENST00000338963 7019 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
NCBP3Q53F19 MAPK10-235ENST00000638225 8941 ntAPPRIS P2 TSL 1 (best) BASIC5.89□□□□□ -1.47
NCBP3Q53F19 ORC4-201ENST00000264169 6598 ntAPPRIS P1 TSL 5 BASIC5.89□□□□□ -1.47
NCBP3Q53F19 RNA5SP505-201ENST00000364748 108 ntBASIC5.89□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 111.2 ms