Protein–RNA interactions for Protein: Q15012

LAPTM4A, Lysosomal-associated transmembrane protein 4A, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LAPTM4AQ15012 RNU6-826P-201ENST00000516827 104 ntBASIC3.8□□□□□ -1.8
LAPTM4AQ15012 SCARNA3-201ENST00000517097 143 ntBASIC3.8□□□□□ -1.8
LAPTM4AQ15012 TRAV8-5-201ENST00000537369 341 ntBASIC3.8□□□□□ -1.8
LAPTM4AQ15012 MIR4715-201ENST00000584117 79 ntBASIC3.8□□□□□ -1.8
LAPTM4AQ15012 HMGN2P15-201ENST00000585707 270 ntBASIC3.8□□□□□ -1.8
LAPTM4AQ15012 LINC01533-202ENST00000588694 632 ntTSL 2 BASIC3.8□□□□□ -1.8
LAPTM4AQ15012 AC140479.6-201ENST00000633535 357 ntBASIC3.8□□□□□ -1.8
LAPTM4AQ15012 EMSY-210ENST00000529032 6848 ntAPPRIS P3 TSL 1 (best) BASIC3.8□□□□□ -1.8
LAPTM4AQ15012 POLR2B-201ENST00000314595 3748 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
LAPTM4AQ15012 SLC38A9-223ENST00000515629 2673 ntTSL 2 BASIC3.8□□□□□ -1.8
LAPTM4AQ15012 TMEM232-201ENST00000455884 2501 ntAPPRIS P2 TSL 2 BASIC3.8□□□□□ -1.8
LAPTM4AQ15012 MAPK10-372ENST00000641954 3413 ntBASIC3.8□□□□□ -1.8
LAPTM4AQ15012 ORC4-201ENST00000264169 6598 ntAPPRIS P1 TSL 5 BASIC3.8□□□□□ -1.8
LAPTM4AQ15012 PDE1A-205ENST00000435564 4885 ntAPPRIS P3 TSL 1 (best) BASIC3.79□□□□□ -1.8
LAPTM4AQ15012 RNF38-210ENST00000611646 5185 ntTSL 5 BASIC3.79□□□□□ -1.8
LAPTM4AQ15012 PPIP5K2-217ENST00000627916 6010 ntAPPRIS ALT2 TSL 5 BASIC3.79□□□□□ -1.8
LAPTM4AQ15012 RNU6-829P-201ENST00000363700 112 ntBASIC3.79□□□□□ -1.8
LAPTM4AQ15012 RNA5SP447-201ENST00000363749 119 ntBASIC3.79□□□□□ -1.8
LAPTM4AQ15012 SNORA27-201ENST00000384323 126 ntBASIC3.79□□□□□ -1.8
LAPTM4AQ15012 RNU1-89P-201ENST00000384592 164 ntBASIC3.79□□□□□ -1.8
LAPTM4AQ15012 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC3.79□□□□□ -1.8
LAPTM4AQ15012 RPS29P17-201ENST00000430795 166 ntBASIC3.79□□□□□ -1.8
LAPTM4AQ15012 ATP6V0E1P2-201ENST00000441771 245 ntBASIC3.79□□□□□ -1.8
LAPTM4AQ15012 AC112771.1-201ENST00000463581 102 ntBASIC3.79□□□□□ -1.8
LAPTM4AQ15012 AC123768.1-201ENST00000486285 432 ntTSL 3 BASIC3.79□□□□□ -1.8
LAPTM4AQ15012 RNU6-998P-201ENST00000515894 101 ntBASIC3.79□□□□□ -1.8
LAPTM4AQ15012 RNA5SP49-201ENST00000516450 115 ntBASIC3.79□□□□□ -1.8
LAPTM4AQ15012 RNA5SP143-201ENST00000516936 115 ntBASIC3.79□□□□□ -1.8
LAPTM4AQ15012 AC012493.2-201ENST00000595083 291 ntBASIC3.79□□□□□ -1.8
LAPTM4AQ15012 AC020914.4-201ENST00000597690 277 ntBASIC3.79□□□□□ -1.8
LAPTM4AQ15012 LINC02471-203ENST00000641941 4752 ntBASIC3.79□□□□□ -1.8
LAPTM4AQ15012 LINC00670-201ENST00000313495 2953 ntTSL 2 BASIC3.79□□□□□ -1.8
LAPTM4AQ15012 AC006504.1-201ENST00000562493 3666 ntBASIC3.79□□□□□ -1.8
LAPTM4AQ15012 AL355596.1-201ENST00000565399 3996 ntBASIC3.79□□□□□ -1.8
LAPTM4AQ15012 SCN3A-201ENST00000283254 9091 ntAPPRIS P3 TSL 1 (best) BASIC3.79□□□□□ -1.8
LAPTM4AQ15012 PCDH15-234ENST00000622048 6820 ntTSL 5 BASIC3.78□□□□□ -1.8
LAPTM4AQ15012 SLITRK5-201ENST00000325089 21103 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
LAPTM4AQ15012 SETDB2-202ENST00000317257 5619 ntAPPRIS ALT2 TSL 1 (best) BASIC3.78□□□□□ -1.8
LAPTM4AQ15012 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC3.78□□□□□ -1.8
LAPTM4AQ15012 RNU1-14P-201ENST00000362759 152 ntBASIC3.78□□□□□ -1.8
LAPTM4AQ15012 RNA5SP322-201ENST00000363617 119 ntBASIC3.78□□□□□ -1.8
LAPTM4AQ15012 RNU6-1235P-201ENST00000384559 107 ntBASIC3.78□□□□□ -1.8
LAPTM4AQ15012 MIR206-201ENST00000384872 86 ntBASIC3.78□□□□□ -1.8
LAPTM4AQ15012 AL445490.2-201ENST00000440492 441 ntTSL 3 BASIC3.78□□□□□ -1.8
LAPTM4AQ15012 AC087499.4-201ENST00000448505 178 ntBASIC3.78□□□□□ -1.8
LAPTM4AQ15012 RNU6-498P-201ENST00000459468 107 ntBASIC3.78□□□□□ -1.8
LAPTM4AQ15012 RNU7-143P-201ENST00000516781 65 ntBASIC3.78□□□□□ -1.8
LAPTM4AQ15012 USP8P1-201ENST00000494673 3183 ntBASIC3.78□□□□□ -1.8
LAPTM4AQ15012 CEP152-203ENST00000399334 5097 ntAPPRIS P3 TSL 1 (best) BASIC3.78□□□□□ -1.8
LAPTM4AQ15012 SCEL-205ENST00000535157 3096 ntAPPRIS ALT2 TSL 2 BASIC3.78□□□□□ -1.8
LAPTM4AQ15012 UBE2D3-233ENST00000618836 3472 ntAPPRIS ALT1 TSL 5 BASIC3.78□□□□□ -1.81
LAPTM4AQ15012 LTN1-207ENST00000614971 7756 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
LAPTM4AQ15012 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
LAPTM4AQ15012 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
LAPTM4AQ15012 SNORD68-201ENST00000363214 84 ntBASIC3.77□□□□□ -1.81
LAPTM4AQ15012 Y_RNA.241-201ENST00000364470 117 ntBASIC3.77□□□□□ -1.81
LAPTM4AQ15012 SNORA25.9-201ENST00000365087 128 ntBASIC3.77□□□□□ -1.81
LAPTM4AQ15012 RNU1-57P-201ENST00000384491 166 ntBASIC3.77□□□□□ -1.81
LAPTM4AQ15012 snoU13.1-201ENST00000459157 104 ntBASIC3.77□□□□□ -1.81
LAPTM4AQ15012 AC106707.2-201ENST00000484182 374 ntBASIC3.77□□□□□ -1.81
LAPTM4AQ15012 AL592156.1-201ENST00000508758 304 ntBASIC3.77□□□□□ -1.81
LAPTM4AQ15012 MIR486-1-201ENST00000612171 68 ntBASIC3.77□□□□□ -1.81
LAPTM4AQ15012 SYNE1-207ENST00000367255 27748 ntAPPRIS P4 TSL 1 (best) BASIC3.77□□□□□ -1.81
LAPTM4AQ15012 AL161912.2-201ENST00000565707 3007 ntBASIC3.77□□□□□ -1.81
LAPTM4AQ15012 ADGRL2-210ENST00000370728 6302 ntAPPRIS ALT2 TSL 5 BASIC3.77□□□□□ -1.81
LAPTM4AQ15012 AC046195.1-201ENST00000518973 4171 ntTSL 2 BASIC3.77□□□□□ -1.81
LAPTM4AQ15012 OSBPL8-202ENST00000393249 7047 ntAPPRIS ALT1 TSL 1 (best) BASIC3.76□□□□□ -1.81
LAPTM4AQ15012 PPIP5K2-201ENST00000321521 15407 ntAPPRIS P3 TSL 5 BASIC3.76□□□□□ -1.81
LAPTM4AQ15012 LRFN5-204ENST00000554171 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC3.76□□□□□ -1.81
LAPTM4AQ15012 LINC01902-202ENST00000636983 4607 ntTSL 5 BASIC3.76□□□□□ -1.81
LAPTM4AQ15012 RNU6-1084P-201ENST00000362498 107 ntBASIC3.76□□□□□ -1.81
LAPTM4AQ15012 SNORA22.1-201ENST00000362701 134 ntBASIC3.76□□□□□ -1.81
LAPTM4AQ15012 SNORD35B-201ENST00000363660 87 ntBASIC3.76□□□□□ -1.81
LAPTM4AQ15012 Y_RNA.173-201ENST00000363776 113 ntBASIC3.76□□□□□ -1.81
LAPTM4AQ15012 RNU1-132P-201ENST00000364300 164 ntBASIC3.76□□□□□ -1.81
LAPTM4AQ15012 MIR192-201ENST00000384915 110 ntBASIC3.76□□□□□ -1.81
LAPTM4AQ15012 AL732292.1-201ENST00000426692 226 ntBASIC3.76□□□□□ -1.81
LAPTM4AQ15012 RN7SL691P-201ENST00000494487 301 ntBASIC3.76□□□□□ -1.81
LAPTM4AQ15012 AC026726.1-201ENST00000512859 601 ntBASIC3.76□□□□□ -1.81
LAPTM4AQ15012 RN7SL722P-201ENST00000617780 284 ntBASIC3.76□□□□□ -1.81
LAPTM4AQ15012 RN7SL565P-201ENST00000618246 284 ntBASIC3.76□□□□□ -1.81
LAPTM4AQ15012 AC012676.2-201ENST00000619258 186 ntBASIC3.76□□□□□ -1.81
LAPTM4AQ15012 MIR1297-201ENST00000637311 77 ntBASIC3.76□□□□□ -1.81
LAPTM4AQ15012 VGLL4-219ENST00000638314 93 ntTSL 5 BASIC3.76□□□□□ -1.81
LAPTM4AQ15012 TLR8-202ENST00000311912 3367 ntAPPRIS P4 TSL 1 (best) BASIC3.76□□□□□ -1.81
LAPTM4AQ15012 LRRC9-202ENST00000445360 4717 ntAPPRIS P1 TSL 5 BASIC3.76□□□□□ -1.81
LAPTM4AQ15012 NLGN1-201ENST00000361589 5092 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
LAPTM4AQ15012 ZFYVE16-201ENST00000338008 6773 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
LAPTM4AQ15012 NR5A2-201ENST00000236914 3115 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
LAPTM4AQ15012 OR1A1-202ENST00000641322 3743 ntAPPRIS P1 BASIC3.75□□□□□ -1.81
LAPTM4AQ15012 LINC00890-202ENST00000569275 4595 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
LAPTM4AQ15012 RNU6-335P-201ENST00000364563 113 ntBASIC3.75□□□□□ -1.81
LAPTM4AQ15012 RNU6-748P-201ENST00000384648 107 ntBASIC3.75□□□□□ -1.81
LAPTM4AQ15012 Y_RNA.625-201ENST00000411256 107 ntBASIC3.75□□□□□ -1.81
LAPTM4AQ15012 TRBV25OR9-2-201ENST00000438417 374 ntBASIC3.75□□□□□ -1.81
LAPTM4AQ15012 AC006011.1-201ENST00000442758 349 ntBASIC3.75□□□□□ -1.81
LAPTM4AQ15012 RPS29P33-201ENST00000456717 146 ntBASIC3.75□□□□□ -1.81
LAPTM4AQ15012 RPS29P22-201ENST00000472363 168 ntBASIC3.75□□□□□ -1.81
LAPTM4AQ15012 FGF7P7-201ENST00000514120 227 ntBASIC3.75□□□□□ -1.81
LAPTM4AQ15012 TVP23BP1-201ENST00000557500 617 ntBASIC3.75□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 109.3 ms