Protein–RNA interactions for Protein: Q08174

PCDH1, Protocadherin-1, humanhuman

Predictions only

Length 1,060 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1Q08174 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC3.28□□□□□ -1.88
PCDH1Q08174 SEM1P1-201ENST00000506694 209 ntBASIC3.28□□□□□ -1.88
PCDH1Q08174 PDCD5P2-201ENST00000507570 312 ntBASIC3.28□□□□□ -1.88
PCDH1Q08174 RNU4ATAC3P-201ENST00000516699 126 ntBASIC3.28□□□□□ -1.88
PCDH1Q08174 IGKV2-26-201ENST00000518305 343 ntBASIC3.28□□□□□ -1.88
PCDH1Q08174 AC107294.3-201ENST00000609211 526 ntBASIC3.28□□□□□ -1.88
PCDH1Q08174 NEB-218ENST00000603639 25578 ntAPPRIS ALT2 TSL 5 BASIC3.28□□□□□ -1.88
PCDH1Q08174 NEB-219ENST00000604864 25578 ntAPPRIS ALT2 TSL 5 BASIC3.28□□□□□ -1.88
PCDH1Q08174 ERBIN-201ENST00000284037 8647 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
PCDH1Q08174 VNN1-201ENST00000367928 3106 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
PCDH1Q08174 AC093725.1-201ENST00000508135 2672 ntTSL 5 BASIC3.27□□□□□ -1.89
PCDH1Q08174 FIGNL1-212ENST00000613602 3187 ntAPPRIS P1 TSL 5 BASIC3.27□□□□□ -1.89
PCDH1Q08174 N4BP2L2-211ENST00000504114 2513 ntTSL 5 BASIC3.27□□□□□ -1.89
PCDH1Q08174 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC3.27□□□□□ -1.89
PCDH1Q08174 NOX4-202ENST00000343727 3347 ntTSL 2 BASIC3.27□□□□□ -1.89
PCDH1Q08174 SNORA63.4-201ENST00000362763 126 ntBASIC3.27□□□□□ -1.89
PCDH1Q08174 MIR562-201ENST00000384894 95 ntBASIC3.27□□□□□ -1.89
PCDH1Q08174 MIR1253-201ENST00000408273 105 ntBASIC3.27□□□□□ -1.89
PCDH1Q08174 AC123900.1-201ENST00000420390 96 ntBASIC3.27□□□□□ -1.89
PCDH1Q08174 AL161788.1-201ENST00000441805 169 ntBASIC3.27□□□□□ -1.89
PCDH1Q08174 AL158147.1-201ENST00000443970 75 ntBASIC3.27□□□□□ -1.89
PCDH1Q08174 CYP2C59P-201ENST00000457790 269 ntBASIC3.27□□□□□ -1.89
PCDH1Q08174 RPS27P29-201ENST00000463110 252 ntBASIC3.27□□□□□ -1.89
PCDH1Q08174 AP001486.1-201ENST00000463339 476 ntBASIC3.27□□□□□ -1.89
PCDH1Q08174 CKS1BP2-201ENST00000497342 240 ntBASIC3.27□□□□□ -1.89
PCDH1Q08174 AC093259.1-201ENST00000509755 300 ntBASIC3.27□□□□□ -1.89
PCDH1Q08174 RNU7-149P-201ENST00000516739 59 ntBASIC3.27□□□□□ -1.89
PCDH1Q08174 RNU6-856P-201ENST00000516959 98 ntBASIC3.27□□□□□ -1.89
PCDH1Q08174 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC3.27□□□□□ -1.89
PCDH1Q08174 AC009137.1-201ENST00000562790 260 ntTSL 3 BASIC3.27□□□□□ -1.89
PCDH1Q08174 AC015911.6-201ENST00000588445 457 ntTSL 3 BASIC3.27□□□□□ -1.89
PCDH1Q08174 U3.45-201ENST00000607547 219 ntBASIC3.27□□□□□ -1.89
PCDH1Q08174 U6.73-201ENST00000619194 103 ntBASIC3.27□□□□□ -1.89
PCDH1Q08174 TTN-204ENST00000360870 18218 ntTSL 5 BASIC3.27□□□□□ -1.89
PCDH1Q08174 POSTN-209ENST00000541179 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC3.27□□□□□ -1.89
PCDH1Q08174 LIG4-205ENST00000614526 3884 ntTSL 2 BASIC3.26□□□□□ -1.89
PCDH1Q08174 Y_RNA.332-201ENST00000365271 113 ntBASIC3.26□□□□□ -1.89
PCDH1Q08174 MIR95-201ENST00000385072 81 ntBASIC3.26□□□□□ -1.89
PCDH1Q08174 MLLT10P1-201ENST00000418346 262 ntBASIC3.26□□□□□ -1.89
PCDH1Q08174 TRIAP1P1-201ENST00000427062 225 ntBASIC3.26□□□□□ -1.89
PCDH1Q08174 PRSS3P4-201ENST00000453323 162 ntBASIC3.26□□□□□ -1.89
PCDH1Q08174 OR9P1P-201ENST00000496431 281 ntBASIC3.26□□□□□ -1.89
PCDH1Q08174 RNU6-126P-201ENST00000516685 103 ntBASIC3.26□□□□□ -1.89
PCDH1Q08174 CYCSP26-201ENST00000534107 320 ntBASIC3.26□□□□□ -1.89
PCDH1Q08174 LINC00508-201ENST00000538901 194 ntTSL 5 BASIC3.26□□□□□ -1.89
PCDH1Q08174 MTND5P34-201ENST00000568888 325 ntBASIC3.26□□□□□ -1.89
PCDH1Q08174 MIR3121-201ENST00000579680 77 ntBASIC3.26□□□□□ -1.89
PCDH1Q08174 AL161756.2-201ENST00000604597 246 ntBASIC3.26□□□□□ -1.89
PCDH1Q08174 U2.20-201ENST00000613956 192 ntBASIC3.26□□□□□ -1.89
PCDH1Q08174 Pinc.1-201ENST00000616452 154 ntBASIC3.26□□□□□ -1.89
PCDH1Q08174 U6.95-201ENST00000636931 70 ntBASIC3.26□□□□□ -1.89
PCDH1Q08174 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC3.26□□□□□ -1.89
PCDH1Q08174 BMP5-201ENST00000370830 3952 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
PCDH1Q08174 ZNF83-201ENST00000301096 2599 ntAPPRIS P1 TSL 3 BASIC3.26□□□□□ -1.89
PCDH1Q08174 ZNF280D-201ENST00000267807 4328 ntAPPRIS P3 TSL 1 (best) BASIC3.25□□□□□ -1.89
PCDH1Q08174 Y_RNA.114-201ENST00000363265 113 ntBASIC3.25□□□□□ -1.89
PCDH1Q08174 RNU1-23P-201ENST00000363361 144 ntBASIC3.25□□□□□ -1.89
PCDH1Q08174 SNORA68.1-201ENST00000364537 132 ntBASIC3.25□□□□□ -1.89
PCDH1Q08174 RNU6-1138P-201ENST00000365359 106 ntBASIC3.25□□□□□ -1.89
PCDH1Q08174 SNORD18B-201ENST00000365659 72 ntBASIC3.25□□□□□ -1.89
PCDH1Q08174 SNORA40.5-201ENST00000391061 128 ntBASIC3.25□□□□□ -1.89
PCDH1Q08174 AL138962.1-201ENST00000417987 411 ntTSL 5 BASIC3.25□□□□□ -1.89
PCDH1Q08174 RNU6-991P-201ENST00000516168 107 ntBASIC3.25□□□□□ -1.89
PCDH1Q08174 Y_RNA.709-201ENST00000516952 92 ntBASIC3.25□□□□□ -1.89
PCDH1Q08174 RNU6-1096P-201ENST00000517089 102 ntBASIC3.25□□□□□ -1.89
PCDH1Q08174 LINC02164-201ENST00000566684 272 ntTSL 3 BASIC3.25□□□□□ -1.89
PCDH1Q08174 MIR4662B-201ENST00000579498 81 ntBASIC3.25□□□□□ -1.89
PCDH1Q08174 JPX_2.1-201ENST00000614161 69 ntBASIC3.25□□□□□ -1.89
PCDH1Q08174 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC3.25□□□□□ -1.89
PCDH1Q08174 RNU4-35P-201ENST00000362588 141 ntBASIC3.24□□□□□ -1.89
PCDH1Q08174 MIR34B-201ENST00000385076 84 ntBASIC3.24□□□□□ -1.89
PCDH1Q08174 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC3.24□□□□□ -1.89
PCDH1Q08174 AL603914.1-201ENST00000401964 204 ntBASIC3.24□□□□□ -1.89
PCDH1Q08174 SNORA48.11-201ENST00000517015 89 ntBASIC3.24□□□□□ -1.89
PCDH1Q08174 AC133485.4-201ENST00000561835 220 ntBASIC3.24□□□□□ -1.89
PCDH1Q08174 AC138907.4-201ENST00000570107 226 ntBASIC3.24□□□□□ -1.89
PCDH1Q08174 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC3.24□□□□□ -1.89
PCDH1Q08174 MAPK10-362ENST00000641864 4484 ntBASIC3.24□□□□□ -1.89
PCDH1Q08174 MARCH7-202ENST00000409175 2402 ntAPPRIS P1 TSL 2 BASIC3.24□□□□□ -1.89
PCDH1Q08174 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC3.24□□□□□ -1.89
PCDH1Q08174 AC108866.1-201ENST00000503073 2339 ntTSL 5 BASIC3.24□□□□□ -1.89
PCDH1Q08174 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC3.23□□□□□ -1.89
PCDH1Q08174 KCNH7-204ENST00000618399 3713 ntTSL 5 BASIC3.23□□□□□ -1.89
PCDH1Q08174 MIR520G-201ENST00000385064 90 ntBASIC3.23□□□□□ -1.89
PCDH1Q08174 AL513477.1-202ENST00000417061 214 ntBASIC3.23□□□□□ -1.89
PCDH1Q08174 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC3.23□□□□□ -1.89
PCDH1Q08174 HMGN2P34-201ENST00000437647 269 ntBASIC3.23□□□□□ -1.89
PCDH1Q08174 AC023141.11-201ENST00000508864 202 ntBASIC3.23□□□□□ -1.89
PCDH1Q08174 RNU6-1061P-201ENST00000516530 99 ntBASIC3.23□□□□□ -1.89
PCDH1Q08174 Y_RNA.690-201ENST00000516603 95 ntBASIC3.23□□□□□ -1.89
PCDH1Q08174 RNU2-60P-201ENST00000517290 128 ntBASIC3.23□□□□□ -1.89
PCDH1Q08174 AP002992.1-202ENST00000530842 551 ntTSL 2 BASIC3.23□□□□□ -1.89
PCDH1Q08174 MIR3922-201ENST00000585192 84 ntBASIC3.23□□□□□ -1.89
PCDH1Q08174 AL356280.1-201ENST00000603614 379 ntBASIC3.23□□□□□ -1.89
PCDH1Q08174 CPD-202ENST00000543464 4007 ntTSL 2 BASIC3.23□□□□□ -1.89
PCDH1Q08174 GABRG2-215ENST00000639213 9960 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
PCDH1Q08174 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
PCDH1Q08174 MINDY3-202ENST00000378036 2452 ntTSL 2 BASIC3.22□□□□□ -1.89
PCDH1Q08174 MIR340-201ENST00000362125 95 ntBASIC3.22□□□□□ -1.89
PCDH1Q08174 RNA5SP50-201ENST00000363731 107 ntBASIC3.22□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 124.6 ms