Protein–RNA interactions for Protein: P78367

NKX3-2, Homeobox protein Nkx-3.2, humanhuman

Predictions only

Length 333 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX3-2P78367 EBAG9P1-201ENST00000418955 543 ntBASIC2.99□□□□□ -1.93
NKX3-2P78367 AC245047.8-201ENST00000456455 284 ntBASIC2.99□□□□□ -1.93
NKX3-2P78367 RN7SL75P-201ENST00000461926 281 ntBASIC2.99□□□□□ -1.93
NKX3-2P78367 LINC02253-201ENST00000559321 448 ntTSL 2 BASIC2.99□□□□□ -1.93
NKX3-2P78367 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC2.99□□□□□ -1.93
NKX3-2P78367 UCA1.1-201ENST00000620952 75 ntBASIC2.99□□□□□ -1.93
NKX3-2P78367 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
NKX3-2P78367 AC064859.1-201ENST00000624741 174 ntBASIC2.99□□□□□ -1.93
NKX3-2P78367 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC2.98□□□□□ -1.93
NKX3-2P78367 AC091564.4-201ENST00000533934 2194 ntBASIC2.98□□□□□ -1.93
NKX3-2P78367 AC093908.1-201ENST00000623125 8092 ntBASIC2.98□□□□□ -1.93
NKX3-2P78367 AASDH-207ENST00000513376 3241 ntTSL 1 (best) BASIC2.98□□□□□ -1.93
NKX3-2P78367 RNU6-1205P-201ENST00000363625 106 ntBASIC2.98□□□□□ -1.93
NKX3-2P78367 RNU6-103P-201ENST00000363686 107 ntBASIC2.98□□□□□ -1.93
NKX3-2P78367 MT-TT-201ENST00000387460 66 ntBASIC2.98□□□□□ -1.93
NKX3-2P78367 MIR1283-1-201ENST00000408494 87 ntBASIC2.98□□□□□ -1.93
NKX3-2P78367 MTATP6P29-201ENST00000415057 132 ntBASIC2.98□□□□□ -1.93
NKX3-2P78367 UBBP3-201ENST00000445497 241 ntBASIC2.98□□□□□ -1.93
NKX3-2P78367 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC2.98□□□□□ -1.93
NKX3-2P78367 RNU7-57P-201ENST00000459540 60 ntBASIC2.98□□□□□ -1.93
NKX3-2P78367 AC012312.1-201ENST00000503710 527 ntTSL 2 BASIC2.98□□□□□ -1.93
NKX3-2P78367 ATP5EP1-201ENST00000510257 156 ntBASIC2.98□□□□□ -1.93
NKX3-2P78367 RNA5SP112-201ENST00000515937 99 ntBASIC2.98□□□□□ -1.93
NKX3-2P78367 RNU6-1007P-201ENST00000516586 107 ntBASIC2.98□□□□□ -1.93
NKX3-2P78367 RNU7-121P-201ENST00000516604 62 ntBASIC2.98□□□□□ -1.93
NKX3-2P78367 AC022616.8-201ENST00000533569 253 ntBASIC2.98□□□□□ -1.93
NKX3-2P78367 SNORD53-201ENST00000579969 78 ntBASIC2.98□□□□□ -1.93
NKX3-2P78367 MIR4431-201ENST00000579990 94 ntBASIC2.98□□□□□ -1.93
NKX3-2P78367 AC091895.1-201ENST00000624494 256 ntBASIC2.98□□□□□ -1.93
NKX3-2P78367 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC2.98□□□□□ -1.93
NKX3-2P78367 PRKG1-205ENST00000401604 5922 ntTSL 5 BASIC2.97□□□□□ -1.93
NKX3-2P78367 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
NKX3-2P78367 U8.7-201ENST00000364940 136 ntBASIC2.97□□□□□ -1.93
NKX3-2P78367 SNORA20B-201ENST00000384220 132 ntBASIC2.97□□□□□ -1.93
NKX3-2P78367 RNU6-1117P-201ENST00000384525 104 ntBASIC2.97□□□□□ -1.93
NKX3-2P78367 RNU6-1081P-201ENST00000384537 107 ntBASIC2.97□□□□□ -1.93
NKX3-2P78367 RNU6-959P-201ENST00000384671 107 ntBASIC2.97□□□□□ -1.93
NKX3-2P78367 MIR569-201ENST00000385228 96 ntBASIC2.97□□□□□ -1.93
NKX3-2P78367 SNORA3.2-201ENST00000408221 125 ntBASIC2.97□□□□□ -1.93
NKX3-2P78367 MIR1294-201ENST00000408503 142 ntBASIC2.97□□□□□ -1.93
NKX3-2P78367 RNA5SP344-201ENST00000411081 104 ntBASIC2.97□□□□□ -1.93
NKX3-2P78367 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC2.97□□□□□ -1.93
NKX3-2P78367 RPS29P6-201ENST00000438196 145 ntBASIC2.97□□□□□ -1.93
NKX3-2P78367 AC010210.1-203ENST00000513905 260 ntTSL 3 BASIC2.97□□□□□ -1.93
NKX3-2P78367 SNORA70.12-201ENST00000516084 153 ntBASIC2.97□□□□□ -1.93
NKX3-2P78367 AC109810.1-201ENST00000534066 224 ntBASIC2.97□□□□□ -1.93
NKX3-2P78367 MIR3605-201ENST00000583214 100 ntBASIC2.97□□□□□ -1.93
NKX3-2P78367 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC2.97□□□□□ -1.93
NKX3-2P78367 AKAP9-202ENST00000358100 10309 ntTSL 1 (best) BASIC2.96□□□□□ -1.93
NKX3-2P78367 AC131280.1-202ENST00000624067 4211 ntBASIC2.96□□□□□ -1.94
NKX3-2P78367 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
NKX3-2P78367 DNAH12-208ENST00000495027 12146 ntAPPRIS P1 TSL 5 BASIC2.96□□□□□ -1.94
NKX3-2P78367 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
NKX3-2P78367 RNU6-1083P-201ENST00000384022 107 ntBASIC2.96□□□□□ -1.94
NKX3-2P78367 SNORD116-13-201ENST00000384408 92 ntBASIC2.96□□□□□ -1.94
NKX3-2P78367 MIR526A2-201ENST00000390198 65 ntBASIC2.96□□□□□ -1.94
NKX3-2P78367 Y_RNA.586-201ENST00000391146 98 ntBASIC2.96□□□□□ -1.94
NKX3-2P78367 RNU6-1328P-201ENST00000410938 106 ntBASIC2.96□□□□□ -1.94
NKX3-2P78367 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC2.96□□□□□ -1.94
NKX3-2P78367 HSPE1P21-201ENST00000438283 308 ntBASIC2.96□□□□□ -1.94
NKX3-2P78367 AC016717.1-201ENST00000448918 286 ntBASIC2.96□□□□□ -1.94
NKX3-2P78367 RPL23AP7-203ENST00000449021 469 ntBASIC2.96□□□□□ -1.94
NKX3-2P78367 AC117454.1-201ENST00000491120 168 ntBASIC2.96□□□□□ -1.94
NKX3-2P78367 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC2.96□□□□□ -1.94
NKX3-2P78367 MIR3684-201ENST00000579779 74 ntBASIC2.96□□□□□ -1.94
NKX3-2P78367 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC2.96□□□□□ -1.94
NKX3-2P78367 Six3os1_7.1-201ENST00000621512 201 ntBASIC2.96□□□□□ -1.94
NKX3-2P78367 MIR3658-201ENST00000636291 56 ntBASIC2.96□□□□□ -1.94
NKX3-2P78367 ZNF658B-202ENST00000615961 3375 ntBASIC2.96□□□□□ -1.94
NKX3-2P78367 ZBBX-201ENST00000307529 3071 ntAPPRIS ALT2 TSL 5 BASIC2.96□□□□□ -1.94
NKX3-2P78367 AC138915.1-201ENST00000565427 1685 ntBASIC2.95□□□□□ -1.94
NKX3-2P78367 MS4A14-202ENST00000395001 3401 ntTSL 5 BASIC2.95□□□□□ -1.94
NKX3-2P78367 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC2.95□□□□□ -1.94
NKX3-2P78367 AC100821.1-201ENST00000523153 2479 ntBASIC2.95□□□□□ -1.94
NKX3-2P78367 RNU6-486P-201ENST00000363116 107 ntBASIC2.95□□□□□ -1.94
NKX3-2P78367 RNU6-234P-201ENST00000365229 104 ntBASIC2.95□□□□□ -1.94
NKX3-2P78367 RNU6-22P-201ENST00000384355 107 ntBASIC2.95□□□□□ -1.94
NKX3-2P78367 MIR616-201ENST00000385293 97 ntBASIC2.95□□□□□ -1.94
NKX3-2P78367 RNU6-257P-201ENST00000410238 98 ntBASIC2.95□□□□□ -1.94
NKX3-2P78367 RNU6-383P-201ENST00000410864 94 ntBASIC2.95□□□□□ -1.94
NKX3-2P78367 TRBV25OR9-2-201ENST00000438417 374 ntBASIC2.95□□□□□ -1.94
NKX3-2P78367 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC2.95□□□□□ -1.94
NKX3-2P78367 RAC1P5-201ENST00000512182 576 ntBASIC2.95□□□□□ -1.94
NKX3-2P78367 RNU6-561P-201ENST00000516222 102 ntBASIC2.95□□□□□ -1.94
NKX3-2P78367 RNU6-1337P-201ENST00000516525 95 ntBASIC2.95□□□□□ -1.94
NKX3-2P78367 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC2.95□□□□□ -1.94
NKX3-2P78367 AC068647.2-201ENST00000637380 353 ntBASIC2.95□□□□□ -1.94
NKX3-2P78367 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC2.95□□□□□ -1.94
NKX3-2P78367 FOXP2-210ENST00000403559 6415 ntTSL 2 BASIC2.94□□□□□ -1.94
NKX3-2P78367 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC2.94□□□□□ -1.94
NKX3-2P78367 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC2.94□□□□□ -1.94
NKX3-2P78367 Y_RNA.229-201ENST00000364347 113 ntBASIC2.94□□□□□ -1.94
NKX3-2P78367 MIR27B-201ENST00000385129 97 ntBASIC2.94□□□□□ -1.94
NKX3-2P78367 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC2.94□□□□□ -1.94
NKX3-2P78367 MIR873-201ENST00000401120 77 ntBASIC2.94□□□□□ -1.94
NKX3-2P78367 MIR300-201ENST00000401138 83 ntBASIC2.94□□□□□ -1.94
NKX3-2P78367 AL137159.1-201ENST00000452808 512 ntBASIC2.94□□□□□ -1.94
NKX3-2P78367 SNORD65B-201ENST00000459126 73 ntBASIC2.94□□□□□ -1.94
NKX3-2P78367 AC027419.1-201ENST00000522976 328 ntBASIC2.94□□□□□ -1.94
NKX3-2P78367 MIR548X2-201ENST00000579776 100 ntBASIC2.94□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 172.7 ms