Protein–RNA interactions for Protein: P60507

ERVFC1, Endogenous retrovirus group FC1 Env polyprotein, humanhuman

Predictions only

Length 584 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERVFC1P60507 snoU2_19.1-201ENST00000362361 80 ntBASIC3.17□□□□□ -1.9
ERVFC1P60507 RNU4-82P-201ENST00000362443 140 ntBASIC3.17□□□□□ -1.9
ERVFC1P60507 RNU6-1255P-201ENST00000363434 112 ntBASIC3.17□□□□□ -1.9
ERVFC1P60507 RNU6-978P-201ENST00000364371 103 ntBASIC3.17□□□□□ -1.9
ERVFC1P60507 RNU6-805P-201ENST00000365643 106 ntBASIC3.17□□□□□ -1.9
ERVFC1P60507 SNORD116-13-201ENST00000384408 92 ntBASIC3.17□□□□□ -1.9
ERVFC1P60507 SNORA12-201ENST00000391162 147 ntBASIC3.17□□□□□ -1.9
ERVFC1P60507 MIR300-201ENST00000401138 83 ntBASIC3.17□□□□□ -1.9
ERVFC1P60507 AL139095.1-201ENST00000404326 391 ntBASIC3.17□□□□□ -1.9
ERVFC1P60507 RNA5SP293-201ENST00000410527 113 ntBASIC3.17□□□□□ -1.9
ERVFC1P60507 Y_RNA.622-201ENST00000411091 108 ntBASIC3.17□□□□□ -1.9
ERVFC1P60507 AC063976.4-201ENST00000421971 163 ntBASIC3.17□□□□□ -1.9
ERVFC1P60507 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC3.17□□□□□ -1.9
ERVFC1P60507 AL158147.1-201ENST00000443970 75 ntBASIC3.17□□□□□ -1.9
ERVFC1P60507 RPS26P55-201ENST00000471178 356 ntBASIC3.17□□□□□ -1.9
ERVFC1P60507 AC010598.1-201ENST00000510378 103 ntBASIC3.17□□□□□ -1.9
ERVFC1P60507 AC008892.1-201ENST00000511861 384 ntTSL 3 BASIC3.17□□□□□ -1.9
ERVFC1P60507 IGKV1OR2-6-201ENST00000603485 277 ntBASIC3.17□□□□□ -1.9
ERVFC1P60507 AC007218.2-201ENST00000636913 179 ntTSL 5 BASIC3.17□□□□□ -1.9
ERVFC1P60507 ZBTB20-201ENST00000357258 27125 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
ERVFC1P60507 ZMYM1-201ENST00000359858 4175 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
ERVFC1P60507 ZNF680-202ENST00000447137 2159 ntTSL 2 BASIC3.17□□□□□ -1.9
ERVFC1P60507 RTTN-201ENST00000255674 6960 ntTSL 5 BASIC3.16□□□□□ -1.9
ERVFC1P60507 RNU6-235P-201ENST00000362644 107 ntBASIC3.16□□□□□ -1.9
ERVFC1P60507 Y_RNA.294-201ENST00000364916 102 ntBASIC3.16□□□□□ -1.9
ERVFC1P60507 SNORA22-201ENST00000383907 134 ntBASIC3.16□□□□□ -1.9
ERVFC1P60507 RNU6-484P-201ENST00000384016 107 ntBASIC3.16□□□□□ -1.9
ERVFC1P60507 AL512604.1-201ENST00000404812 257 ntBASIC3.16□□□□□ -1.9
ERVFC1P60507 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC3.16□□□□□ -1.9
ERVFC1P60507 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC3.16□□□□□ -1.9
ERVFC1P60507 AC010401.1-201ENST00000463867 348 ntBASIC3.16□□□□□ -1.9
ERVFC1P60507 RNU6-1098P-201ENST00000516772 96 ntBASIC3.16□□□□□ -1.9
ERVFC1P60507 RNA5SP380-201ENST00000517190 98 ntBASIC3.16□□□□□ -1.9
ERVFC1P60507 AC079600.2-201ENST00000550076 130 ntBASIC3.16□□□□□ -1.9
ERVFC1P60507 AC026462.2-201ENST00000565771 286 ntTSL 2 BASIC3.16□□□□□ -1.9
ERVFC1P60507 MTND5P34-201ENST00000568888 325 ntBASIC3.16□□□□□ -1.9
ERVFC1P60507 AC007318.2-201ENST00000620999 243 ntBASIC3.16□□□□□ -1.9
ERVFC1P60507 Six3os1_7.1-201ENST00000621512 201 ntBASIC3.16□□□□□ -1.9
ERVFC1P60507 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC3.15□□□□□ -1.9
ERVFC1P60507 TDRD15-201ENST00000405799 6135 ntAPPRIS P1 TSL 2 BASIC3.15□□□□□ -1.9
ERVFC1P60507 RNU6-147P-201ENST00000383983 107 ntBASIC3.15□□□□□ -1.91
ERVFC1P60507 Y_RNA.587-201ENST00000391210 103 ntBASIC3.15□□□□□ -1.91
ERVFC1P60507 AL135786.1-201ENST00000415892 214 ntBASIC3.15□□□□□ -1.91
ERVFC1P60507 AL359853.2-201ENST00000442108 353 ntTSL 2 BASIC3.15□□□□□ -1.91
ERVFC1P60507 AC112771.1-201ENST00000463581 102 ntBASIC3.15□□□□□ -1.91
ERVFC1P60507 RPL36AP48-201ENST00000485521 314 ntBASIC3.15□□□□□ -1.91
ERVFC1P60507 AP000867.2-201ENST00000532468 320 ntBASIC3.15□□□□□ -1.91
ERVFC1P60507 AL031274.2-201ENST00000599419 203 ntBASIC3.15□□□□□ -1.91
ERVFC1P60507 AC107294.3-201ENST00000609211 526 ntBASIC3.15□□□□□ -1.91
ERVFC1P60507 MS4A14-202ENST00000395001 3401 ntTSL 5 BASIC3.15□□□□□ -1.91
ERVFC1P60507 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
ERVFC1P60507 HDX-201ENST00000297977 6200 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
ERVFC1P60507 TTN-204ENST00000360870 18218 ntTSL 5 BASIC3.15□□□□□ -1.91
ERVFC1P60507 ZNF676-201ENST00000397121 2944 ntAPPRIS P1 TSL 2 BASIC3.15□□□□□ -1.91
ERVFC1P60507 FNBP1L-203ENST00000370253 3889 ntAPPRIS ALT1 TSL 5 BASIC3.15□□□□□ -1.91
ERVFC1P60507 MTND5P32-201ENST00000560711 1802 ntBASIC3.14□□□□□ -1.91
ERVFC1P60507 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC3.14□□□□□ -1.91
ERVFC1P60507 ROS1-202ENST00000368508 7435 ntAPPRIS P2 TSL 1 (best) BASIC3.14□□□□□ -1.91
ERVFC1P60507 AL445259.1-201ENST00000587106 2984 ntTSL 5 BASIC3.14□□□□□ -1.91
ERVFC1P60507 DYNLT3P1-201ENST00000378574 347 ntBASIC3.14□□□□□ -1.91
ERVFC1P60507 Y_RNA.432-201ENST00000384087 111 ntBASIC3.14□□□□□ -1.91
ERVFC1P60507 MIR29B2-201ENST00000385055 81 ntBASIC3.14□□□□□ -1.91
ERVFC1P60507 MIR1283-1-201ENST00000408494 87 ntBASIC3.14□□□□□ -1.91
ERVFC1P60507 LINC01402-201ENST00000422226 279 ntTSL 3 BASIC3.14□□□□□ -1.91
ERVFC1P60507 SNORD65B-201ENST00000459126 73 ntBASIC3.14□□□□□ -1.91
ERVFC1P60507 RNU7-57P-201ENST00000459540 60 ntBASIC3.14□□□□□ -1.91
ERVFC1P60507 RNU6-221P-201ENST00000459541 99 ntBASIC3.14□□□□□ -1.91
ERVFC1P60507 RN7SL20P-201ENST00000488827 297 ntBASIC3.14□□□□□ -1.91
ERVFC1P60507 RPL23AP54-201ENST00000495129 419 ntBASIC3.14□□□□□ -1.91
ERVFC1P60507 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC3.14□□□□□ -1.91
ERVFC1P60507 SNORA72.7-201ENST00000516349 94 ntBASIC3.14□□□□□ -1.91
ERVFC1P60507 RNA5SP153-201ENST00000516498 76 ntBASIC3.14□□□□□ -1.91
ERVFC1P60507 SCARNA20.6-201ENST00000517251 106 ntBASIC3.14□□□□□ -1.91
ERVFC1P60507 NCRNA00250-201ENST00000519500 519 ntTSL 4 BASIC3.14□□□□□ -1.91
ERVFC1P60507 AC008739.2-201ENST00000597006 317 ntBASIC3.14□□□□□ -1.91
ERVFC1P60507 snoZ196.1-201ENST00000625269 89 ntBASIC3.14□□□□□ -1.91
ERVFC1P60507 AC009487.4-201ENST00000624969 3585 ntBASIC3.14□□□□□ -1.91
ERVFC1P60507 KIAA1109-203ENST00000388738 15574 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
ERVFC1P60507 AC138915.1-201ENST00000565427 1685 ntBASIC3.14□□□□□ -1.91
ERVFC1P60507 U8.1-201ENST00000362843 134 ntBASIC3.13□□□□□ -1.91
ERVFC1P60507 RNU6-851P-201ENST00000384565 107 ntBASIC3.13□□□□□ -1.91
ERVFC1P60507 EIF4EP4-201ENST00000424916 578 ntBASIC3.13□□□□□ -1.91
ERVFC1P60507 AC087499.2-201ENST00000432861 149 ntBASIC3.13□□□□□ -1.91
ERVFC1P60507 AC009969.1-201ENST00000438726 172 ntBASIC3.13□□□□□ -1.91
ERVFC1P60507 RPL39P40-201ENST00000445481 146 ntBASIC3.13□□□□□ -1.91
ERVFC1P60507 AC010531.2-201ENST00000465012 153 ntBASIC3.13□□□□□ -1.91
ERVFC1P60507 RNU6-1299P-201ENST00000516316 100 ntBASIC3.13□□□□□ -1.91
ERVFC1P60507 RNU5F-4P-201ENST00000516581 114 ntBASIC3.13□□□□□ -1.91
ERVFC1P60507 NDUFA5P6-201ENST00000542110 379 ntBASIC3.13□□□□□ -1.91
ERVFC1P60507 AC131055.1-201ENST00000584626 316 ntBASIC3.13□□□□□ -1.91
ERVFC1P60507 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC3.13□□□□□ -1.91
ERVFC1P60507 AC097639.2-201ENST00000603159 172 ntBASIC3.13□□□□□ -1.91
ERVFC1P60507 AC006435.5-201ENST00000624486 112 ntBASIC3.13□□□□□ -1.91
ERVFC1P60507 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
ERVFC1P60507 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC3.13□□□□□ -1.91
ERVFC1P60507 GNAI3-201ENST00000369851 27174 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
ERVFC1P60507 ABCG2-204ENST00000515655 4276 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
ERVFC1P60507 AC091564.4-201ENST00000533934 2194 ntBASIC3.12□□□□□ -1.91
ERVFC1P60507 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC3.12□□□□□ -1.91
ERVFC1P60507 ATP2B1-201ENST00000261173 6777 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 111.8 ms