Protein–RNA interactions for Protein: P48443

RXRG, Retinoic acid receptor RXR-gamma, humanhuman

Predictions only

Length 463 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RXRGP48443 CEP57L1P1-201ENST00000430943 1201 ntBASIC1.72□□□□□ -2.13
RXRGP48443 PGBD4P5-201ENST00000445958 426 ntBASIC1.72□□□□□ -2.13
RXRGP48443 SNORA40.9-201ENST00000515895 93 ntBASIC1.72□□□□□ -2.13
RXRGP48443 AC019176.1-201ENST00000518519 225 ntBASIC1.72□□□□□ -2.13
RXRGP48443 AL355073.2-201ENST00000612106 557 ntBASIC1.72□□□□□ -2.13
RXRGP48443 AC095038.3-201ENST00000634439 195 ntBASIC1.72□□□□□ -2.13
RXRGP48443 AC006026.1-201ENST00000444025 1803 ntBASIC1.71□□□□□ -2.14
RXRGP48443 Y_RNA.142-201ENST00000363491 102 ntBASIC1.71□□□□□ -2.14
RXRGP48443 Y_RNA.259-201ENST00000364619 101 ntBASIC1.71□□□□□ -2.14
RXRGP48443 RNU6-310P-201ENST00000384655 107 ntBASIC1.71□□□□□ -2.14
RXRGP48443 RNU6-1031P-201ENST00000384773 107 ntBASIC1.71□□□□□ -2.14
RXRGP48443 RNU6-440P-201ENST00000390882 105 ntBASIC1.71□□□□□ -2.14
RXRGP48443 SNORD12B-201ENST00000410433 91 ntBASIC1.71□□□□□ -2.14
RXRGP48443 Y_RNA.646-201ENST00000410980 101 ntBASIC1.71□□□□□ -2.14
RXRGP48443 ELOCP21-201ENST00000412558 336 ntBASIC1.71□□□□□ -2.14
RXRGP48443 AP1B1P2-201ENST00000416196 106 ntBASIC1.71□□□□□ -2.14
RXRGP48443 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC1.71□□□□□ -2.14
RXRGP48443 MTND4P28-201ENST00000426217 387 ntBASIC1.71□□□□□ -2.14
RXRGP48443 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC1.71□□□□□ -2.14
RXRGP48443 AC097462.1-201ENST00000514125 324 ntBASIC1.71□□□□□ -2.14
RXRGP48443 RNU6-1278P-201ENST00000516130 107 ntBASIC1.71□□□□□ -2.14
RXRGP48443 MIR4419B-201ENST00000577260 68 ntBASIC1.71□□□□□ -2.14
RXRGP48443 AC015688.6-201ENST00000577737 104 ntBASIC1.71□□□□□ -2.14
RXRGP48443 AC073413.2-201ENST00000604332 360 ntBASIC1.71□□□□□ -2.14
RXRGP48443 U6.108-201ENST00000637764 58 ntBASIC1.71□□□□□ -2.14
RXRGP48443 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC1.71□□□□□ -2.14
RXRGP48443 Y_RNA.387-201ENST00000383918 102 ntBASIC1.7□□□□□ -2.14
RXRGP48443 SNORA20B-201ENST00000384220 132 ntBASIC1.7□□□□□ -2.14
RXRGP48443 MIR628-201ENST00000385229 95 ntBASIC1.7□□□□□ -2.14
RXRGP48443 RNU4-62P-201ENST00000410125 130 ntBASIC1.7□□□□□ -2.14
RXRGP48443 RNU4-14P-201ENST00000410858 122 ntBASIC1.7□□□□□ -2.14
RXRGP48443 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC1.7□□□□□ -2.14
RXRGP48443 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC1.7□□□□□ -2.14
RXRGP48443 UBE2V2P2-201ENST00000587677 504 ntBASIC1.7□□□□□ -2.14
RXRGP48443 AC022217.4-201ENST00000604389 163 ntBASIC1.7□□□□□ -2.14
RXRGP48443 MIR410-201ENST00000362222 80 ntBASIC1.69□□□□□ -2.14
RXRGP48443 SNORD48-201ENST00000364953 64 ntBASIC1.69□□□□□ -2.14
RXRGP48443 RNU6-376P-201ENST00000384731 106 ntBASIC1.69□□□□□ -2.14
RXRGP48443 RAB28P5-201ENST00000427490 651 ntBASIC1.69□□□□□ -2.14
RXRGP48443 AC027119.1-201ENST00000440877 241 ntBASIC1.69□□□□□ -2.14
RXRGP48443 RBMX2P4-201ENST00000441256 376 ntBASIC1.69□□□□□ -2.14
RXRGP48443 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC1.69□□□□□ -2.14
RXRGP48443 RPS27P1-201ENST00000450552 247 ntBASIC1.69□□□□□ -2.14
RXRGP48443 U8.22-201ENST00000459141 133 ntBASIC1.69□□□□□ -2.14
RXRGP48443 RNA5SP20-201ENST00000515976 84 ntBASIC1.69□□□□□ -2.14
RXRGP48443 RNU2-56P-201ENST00000516826 190 ntBASIC1.69□□□□□ -2.14
RXRGP48443 AC079907.1-201ENST00000552707 374 ntTSL 3 BASIC1.69□□□□□ -2.14
RXRGP48443 AC005730.3-201ENST00000583067 366 ntBASIC1.69□□□□□ -2.14
RXRGP48443 RBM11P1-201ENST00000604951 799 ntBASIC1.69□□□□□ -2.14
RXRGP48443 CDKN3-212ENST00000620759 196 ntTSL 5 BASIC1.69□□□□□ -2.14
RXRGP48443 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.69□□□□□ -2.14
RXRGP48443 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.69□□□□□ -2.14
RXRGP48443 MIR302D-201ENST00000362275 68 ntBASIC1.68□□□□□ -2.14
RXRGP48443 RNU6-1301P-201ENST00000362724 104 ntBASIC1.68□□□□□ -2.14
RXRGP48443 RNU6-890P-201ENST00000384121 107 ntBASIC1.68□□□□□ -2.14
RXRGP48443 MIR194-1-201ENST00000384892 85 ntBASIC1.68□□□□□ -2.14
RXRGP48443 AC099799.1-201ENST00000439809 192 ntBASIC1.68□□□□□ -2.14
RXRGP48443 RNU1-98P-201ENST00000458992 160 ntBASIC1.68□□□□□ -2.14
RXRGP48443 RNU6-470P-201ENST00000515954 104 ntBASIC1.68□□□□□ -2.14
RXRGP48443 Y_RNA.673-201ENST00000516306 88 ntBASIC1.68□□□□□ -2.14
RXRGP48443 AL442163.3-201ENST00000554110 156 ntBASIC1.68□□□□□ -2.14
RXRGP48443 AL161670.1-201ENST00000554348 137 ntBASIC1.68□□□□□ -2.14
RXRGP48443 C18orf54-203ENST00000578138 776 ntTSL 3 BASIC1.68□□□□□ -2.14
RXRGP48443 MIR4303-201ENST00000581299 66 ntBASIC1.68□□□□□ -2.14
RXRGP48443 MIR4781-201ENST00000585250 76 ntBASIC1.68□□□□□ -2.14
RXRGP48443 AC006380.1-201ENST00000603598 186 ntBASIC1.68□□□□□ -2.14
RXRGP48443 AL021879.1-201ENST00000611756 288 ntBASIC1.68□□□□□ -2.14
RXRGP48443 AC021506.2-201ENST00000612354 169 ntBASIC1.68□□□□□ -2.14
RXRGP48443 AL357075.2-201ENST00000614906 189 ntBASIC1.68□□□□□ -2.14
RXRGP48443 MIR6079-201ENST00000635807 62 ntBASIC1.68□□□□□ -2.14
RXRGP48443 AL161722.3-201ENST00000605789 2983 ntBASIC1.68□□□□□ -2.14
RXRGP48443 RNU1-22P-201ENST00000363334 158 ntBASIC1.67□□□□□ -2.14
RXRGP48443 Y_RNA.265-201ENST00000364677 108 ntBASIC1.67□□□□□ -2.14
RXRGP48443 Y_RNA.314-201ENST00000365114 102 ntBASIC1.67□□□□□ -2.14
RXRGP48443 Y_RNA.592-201ENST00000410274 109 ntBASIC1.67□□□□□ -2.14
RXRGP48443 RNU6-321P-201ENST00000410912 106 ntBASIC1.67□□□□□ -2.14
RXRGP48443 MTCO2P27-201ENST00000420740 428 ntBASIC1.67□□□□□ -2.14
RXRGP48443 AC018865.2-201ENST00000423631 129 ntBASIC1.67□□□□□ -2.14
RXRGP48443 LINC01870-201ENST00000427042 390 ntTSL 3 BASIC1.67□□□□□ -2.14
RXRGP48443 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC1.67□□□□□ -2.14
RXRGP48443 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC1.67□□□□□ -2.14
RXRGP48443 LINC01323-201ENST00000486767 576 ntTSL 3 BASIC1.67□□□□□ -2.14
RXRGP48443 RNU7-128P-201ENST00000517247 62 ntBASIC1.67□□□□□ -2.14
RXRGP48443 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC1.67□□□□□ -2.14
RXRGP48443 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC1.67□□□□□ -2.14
RXRGP48443 SNORA27.1-201ENST00000362604 124 ntBASIC1.66□□□□□ -2.14
RXRGP48443 RNU6-318P-201ENST00000384283 103 ntBASIC1.66□□□□□ -2.14
RXRGP48443 MIR873-201ENST00000401120 77 ntBASIC1.66□□□□□ -2.14
RXRGP48443 AL135790.2-201ENST00000437701 267 ntBASIC1.66□□□□□ -2.14
RXRGP48443 AL606517.2-201ENST00000442855 241 ntBASIC1.66□□□□□ -2.14
RXRGP48443 AC093019.1-201ENST00000443135 252 ntBASIC1.66□□□□□ -2.14
RXRGP48443 FCF1P4-201ENST00000448326 183 ntBASIC1.66□□□□□ -2.14
RXRGP48443 SNORA70.12-201ENST00000516084 153 ntBASIC1.66□□□□□ -2.14
RXRGP48443 RNU7-28P-201ENST00000516759 62 ntBASIC1.66□□□□□ -2.14
RXRGP48443 DNAJC19P9-201ENST00000555084 351 ntBASIC1.66□□□□□ -2.14
RXRGP48443 LUZP6-201ENST00000589735 177 ntAPPRIS P1 BASIC1.66□□□□□ -2.14
RXRGP48443 AL359821.1-201ENST00000605519 182 ntBASIC1.66□□□□□ -2.14
RXRGP48443 AC073349.3-201ENST00000617616 186 ntBASIC1.66□□□□□ -2.14
RXRGP48443 AL513423.1-201ENST00000621695 132 ntBASIC1.66□□□□□ -2.14
RXRGP48443 Y_RNA.226-201ENST00000364337 114 ntBASIC1.65□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 125.1 ms