Protein–RNA interactions for Protein: P18206

VCL, Vinculin, humanhuman

Predictions only

Length 1,134 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCLP18206 RPL23AP36-201ENST00000413895 458 ntBASIC1.33□□□□□ -2.2
VCLP18206 MTCO3P19-201ENST00000415864 321 ntBASIC1.33□□□□□ -2.2
VCLP18206 AC015922.2-201ENST00000435593 184 ntBASIC1.33□□□□□ -2.2
VCLP18206 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC1.33□□□□□ -2.2
VCLP18206 RPL17P19-201ENST00000489069 552 ntBASIC1.33□□□□□ -2.2
VCLP18206 RNU7-172P-201ENST00000517125 64 ntBASIC1.33□□□□□ -2.2
VCLP18206 AC022868.1-201ENST00000517767 391 ntBASIC1.33□□□□□ -2.2
VCLP18206 MTND4LP26-201ENST00000518144 282 ntBASIC1.33□□□□□ -2.2
VCLP18206 AC016727.1-205ENST00000605437 569 ntBASIC1.33□□□□□ -2.2
VCLP18206 SNORA28-201ENST00000606769 126 ntBASIC1.33□□□□□ -2.2
VCLP18206 AL021879.1-201ENST00000611756 288 ntBASIC1.33□□□□□ -2.2
VCLP18206 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC1.33□□□□□ -2.2
VCLP18206 AL157834.3-201ENST00000615543 103 ntBASIC1.33□□□□□ -2.2
VCLP18206 CASC19-280ENST00000642102 1351 ntBASIC1.33□□□□□ -2.2
VCLP18206 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC1.32□□□□□ -2.2
VCLP18206 AL391987.6-201ENST00000305671 199 ntBASIC1.32□□□□□ -2.2
VCLP18206 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC1.32□□□□□ -2.2
VCLP18206 Y_RNA.160-201ENST00000363677 92 ntBASIC1.32□□□□□ -2.2
VCLP18206 Y_RNA.358-201ENST00000365491 99 ntBASIC1.32□□□□□ -2.2
VCLP18206 SNORA20B-201ENST00000384220 132 ntBASIC1.32□□□□□ -2.2
VCLP18206 MIR562-201ENST00000384894 95 ntBASIC1.32□□□□□ -2.2
VCLP18206 RNA5SP475-201ENST00000410568 110 ntBASIC1.32□□□□□ -2.2
VCLP18206 ELOCP21-201ENST00000412558 336 ntBASIC1.32□□□□□ -2.2
VCLP18206 RPS29P29-201ENST00000456396 171 ntBASIC1.32□□□□□ -2.2
VCLP18206 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC1.32□□□□□ -2.2
VCLP18206 AL512310.8-201ENST00000550183 120 ntBASIC1.32□□□□□ -2.2
VCLP18206 MIR4498-201ENST00000577599 66 ntBASIC1.32□□□□□ -2.2
VCLP18206 AL390123.1-201ENST00000603216 237 ntBASIC1.32□□□□□ -2.2
VCLP18206 AC073413.2-201ENST00000604332 360 ntBASIC1.32□□□□□ -2.2
VCLP18206 AC092794.1-201ENST00000612734 582 ntBASIC1.32□□□□□ -2.2
VCLP18206 RNU6-845P-201ENST00000362578 103 ntBASIC1.31□□□□□ -2.2
VCLP18206 Y_RNA.404-201ENST00000383978 102 ntBASIC1.31□□□□□ -2.2
VCLP18206 PSPC1-AS2-201ENST00000423023 376 ntTSL 3 BASIC1.31□□□□□ -2.2
VCLP18206 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC1.31□□□□□ -2.2
VCLP18206 AC097462.1-201ENST00000514125 324 ntBASIC1.31□□□□□ -2.2
VCLP18206 SCARNA16.2-201ENST00000516520 172 ntBASIC1.31□□□□□ -2.2
VCLP18206 RN7SKP49-201ENST00000516675 260 ntBASIC1.31□□□□□ -2.2
VCLP18206 AC018448.1-201ENST00000552843 316 ntBASIC1.31□□□□□ -2.2
VCLP18206 CYP3A52P-201ENST00000563326 91 ntBASIC1.31□□□□□ -2.2
VCLP18206 AC068338.1-201ENST00000565567 176 ntBASIC1.31□□□□□ -2.2
VCLP18206 AC073349.3-201ENST00000617616 186 ntBASIC1.31□□□□□ -2.2
VCLP18206 AL353770.2-201ENST00000620024 78 ntBASIC1.31□□□□□ -2.2
VCLP18206 MIR8065-201ENST00000620577 100 ntBASIC1.31□□□□□ -2.2
VCLP18206 AL513423.1-201ENST00000621695 132 ntBASIC1.31□□□□□ -2.2
VCLP18206 ANKRD30BP1-201ENST00000451052 2186 ntBASIC1.31□□□□□ -2.2
VCLP18206 RNU6-874P-201ENST00000362390 105 ntBASIC1.3□□□□□ -2.2
VCLP18206 RNA5SP361-201ENST00000362686 118 ntBASIC1.3□□□□□ -2.2
VCLP18206 RNU6-407P-201ENST00000365280 104 ntBASIC1.3□□□□□ -2.2
VCLP18206 RNU1-123P-201ENST00000458950 160 ntBASIC1.3□□□□□ -2.2
VCLP18206 SEMA6A-AS1-204ENST00000510682 521 ntTSL 5 BASIC1.3□□□□□ -2.2
VCLP18206 MIR2355-201ENST00000517199 87 ntBASIC1.3□□□□□ -2.2
VCLP18206 AP003033.1-201ENST00000527244 415 ntBASIC1.3□□□□□ -2.2
VCLP18206 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC1.3□□□□□ -2.2
VCLP18206 WT1-AS_8.1-201ENST00000615200 275 ntBASIC1.3□□□□□ -2.2
VCLP18206 SNORD3E-202ENST00000627253 216 ntBASIC1.3□□□□□ -2.2
VCLP18206 MIR6079-201ENST00000635807 62 ntBASIC1.3□□□□□ -2.2
VCLP18206 AC091812.1-201ENST00000432235 1948 ntBASIC1.3□□□□□ -2.2
VCLP18206 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC1.29□□□□□ -2.2
VCLP18206 RNU1-22P-201ENST00000363334 158 ntBASIC1.29□□□□□ -2.2
VCLP18206 RNU6-876P-201ENST00000391295 104 ntBASIC1.29□□□□□ -2.2
VCLP18206 AL355796.1-201ENST00000406706 323 ntBASIC1.29□□□□□ -2.2
VCLP18206 Y_RNA.619-201ENST00000410951 90 ntBASIC1.29□□□□□ -2.2
VCLP18206 AC114482.1-201ENST00000418010 247 ntBASIC1.29□□□□□ -2.2
VCLP18206 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC1.29□□□□□ -2.2
VCLP18206 Y_RNA.635-201ENST00000459041 101 ntBASIC1.29□□□□□ -2.2
VCLP18206 MIR2053-201ENST00000459295 91 ntBASIC1.29□□□□□ -2.2
VCLP18206 RNU6-625P-201ENST00000459412 107 ntBASIC1.29□□□□□ -2.2
VCLP18206 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC1.29□□□□□ -2.2
VCLP18206 ATP1B3-AS1-201ENST00000492725 376 ntTSL 5 BASIC1.29□□□□□ -2.2
VCLP18206 RNA5SP20-201ENST00000515976 84 ntBASIC1.29□□□□□ -2.2
VCLP18206 RN7SKP88-201ENST00000516847 250 ntBASIC1.29□□□□□ -2.2
VCLP18206 RNU6-264P-201ENST00000517134 104 ntBASIC1.29□□□□□ -2.2
VCLP18206 7SK.8-201ENST00000612110 250 ntBASIC1.29□□□□□ -2.2
VCLP18206 AL357075.2-201ENST00000614906 189 ntBASIC1.29□□□□□ -2.2
VCLP18206 7SK.11-201ENST00000615477 250 ntBASIC1.29□□□□□ -2.2
VCLP18206 7SK.13-201ENST00000622040 250 ntBASIC1.29□□□□□ -2.2
VCLP18206 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC1.29□□□□□ -2.2
VCLP18206 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.28□□□□□ -2.2
VCLP18206 MIR410-201ENST00000362222 80 ntBASIC1.28□□□□□ -2.2
VCLP18206 Y_RNA.166-201ENST00000363730 102 ntBASIC1.28□□□□□ -2.2
VCLP18206 Y_RNA.265-201ENST00000364677 108 ntBASIC1.28□□□□□ -2.2
VCLP18206 Y_RNA.279-201ENST00000364763 95 ntBASIC1.28□□□□□ -2.2
VCLP18206 RNU6-1310P-201ENST00000384153 107 ntBASIC1.28□□□□□ -2.2
VCLP18206 RNU6-939P-201ENST00000384634 107 ntBASIC1.28□□□□□ -2.2
VCLP18206 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC1.28□□□□□ -2.2
VCLP18206 STAG3L5P-204ENST00000443759 179 ntBASIC1.28□□□□□ -2.2
VCLP18206 U8.22-201ENST00000459141 133 ntBASIC1.28□□□□□ -2.2
VCLP18206 RPL39P38-201ENST00000467018 153 ntBASIC1.28□□□□□ -2.2
VCLP18206 RNU6-1053P-201ENST00000515930 101 ntBASIC1.28□□□□□ -2.2
VCLP18206 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC1.28□□□□□ -2.2
VCLP18206 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC1.28□□□□□ -2.2
VCLP18206 MIR3664-201ENST00000579074 99 ntBASIC1.28□□□□□ -2.2
VCLP18206 MIR6078-201ENST00000611069 100 ntBASIC1.28□□□□□ -2.2
VCLP18206 MIR1244-1-201ENST00000612829 85 ntBASIC1.28□□□□□ -2.2
VCLP18206 MIR1244-3-201ENST00000635744 85 ntBASIC1.28□□□□□ -2.2
VCLP18206 MIR1244-2-201ENST00000636449 85 ntBASIC1.28□□□□□ -2.2
VCLP18206 MIR3674-201ENST00000636576 68 ntBASIC1.28□□□□□ -2.2
VCLP18206 MIR1244-4-202ENST00000636813 85 ntBASIC1.28□□□□□ -2.2
VCLP18206 SNORA27.1-201ENST00000362604 124 ntBASIC1.27□□□□□ -2.21
VCLP18206 Y_RNA.248-201ENST00000364501 109 ntBASIC1.27□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 115.9 ms