Protein–RNA interactions for Protein: P13378

HOXD8, Homeobox protein Hox-D8, humanhuman

Predicted RBP Predictions only

Length 290 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD8P13378 RNU6-647P-201ENST00000364243 107 ntBASIC3.5□□□□□ -1.85
HOXD8P13378 SNORD116-21-201ENST00000384507 92 ntBASIC3.5□□□□□ -1.85
HOXD8P13378 MIR184-201ENST00000384962 84 ntBASIC3.5□□□□□ -1.85
HOXD8P13378 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC3.5□□□□□ -1.85
HOXD8P13378 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC3.5□□□□□ -1.85
HOXD8P13378 CST9LP2-201ENST00000437612 320 ntBASIC3.5□□□□□ -1.85
HOXD8P13378 RPL39P40-201ENST00000445481 146 ntBASIC3.5□□□□□ -1.85
HOXD8P13378 AC068580.2-201ENST00000449749 338 ntTSL 5 BASIC3.5□□□□□ -1.85
HOXD8P13378 SNORD77.4-201ENST00000516158 81 ntBASIC3.5□□□□□ -1.85
HOXD8P13378 RNU6-711P-201ENST00000517255 106 ntBASIC3.5□□□□□ -1.85
HOXD8P13378 MIR4438-201ENST00000585271 93 ntBASIC3.5□□□□□ -1.85
HOXD8P13378 RPL12P50-201ENST00000603116 116 ntBASIC3.5□□□□□ -1.85
HOXD8P13378 AC006023.1-201ENST00000603944 259 ntBASIC3.5□□□□□ -1.85
HOXD8P13378 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC3.5□□□□□ -1.85
HOXD8P13378 ZNF804B-202ENST00000611114 3968 ntTSL 5 BASIC3.5□□□□□ -1.85
HOXD8P13378 ATP2B1-202ENST00000359142 6977 ntTSL 5 BASIC3.5□□□□□ -1.85
HOXD8P13378 ATM-203ENST00000452508 12954 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
HOXD8P13378 IL1RL1-204ENST00000409584 2693 ntTSL 5 BASIC3.49□□□□□ -1.85
HOXD8P13378 SKIL-203ENST00000426052 2757 ntTSL 2 BASIC3.49□□□□□ -1.85
HOXD8P13378 MIR30E-201ENST00000362104 92 ntBASIC3.49□□□□□ -1.85
HOXD8P13378 Y_RNA.634-201ENST00000364811 113 ntBASIC3.49□□□□□ -1.85
HOXD8P13378 MIR1253-201ENST00000408273 105 ntBASIC3.49□□□□□ -1.85
HOXD8P13378 AC009414.1-201ENST00000427200 443 ntBASIC3.49□□□□□ -1.85
HOXD8P13378 RPL30P4-201ENST00000429309 333 ntBASIC3.49□□□□□ -1.85
HOXD8P13378 RNU7-172P-201ENST00000517125 64 ntBASIC3.49□□□□□ -1.85
HOXD8P13378 GEN1-201ENST00000317402 9854 ntAPPRIS P1 TSL 2 BASIC3.49□□□□□ -1.85
HOXD8P13378 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
HOXD8P13378 AC000403.1-201ENST00000613696 3585 ntBASIC3.48□□□□□ -1.85
HOXD8P13378 ERBIN-201ENST00000284037 8647 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
HOXD8P13378 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC3.48□□□□□ -1.85
HOXD8P13378 KIAA1524-206ENST00000491772 3877 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
HOXD8P13378 RNU6-743P-201ENST00000364151 106 ntBASIC3.48□□□□□ -1.85
HOXD8P13378 RNU6-147P-201ENST00000383983 107 ntBASIC3.48□□□□□ -1.85
HOXD8P13378 Y_RNA.630-201ENST00000411370 108 ntBASIC3.48□□□□□ -1.85
HOXD8P13378 RPS4XP11-201ENST00000446897 772 ntBASIC3.48□□□□□ -1.85
HOXD8P13378 RN7SL330P-201ENST00000469709 307 ntBASIC3.48□□□□□ -1.85
HOXD8P13378 CKS1BP2-201ENST00000497342 240 ntBASIC3.48□□□□□ -1.85
HOXD8P13378 SCARNA17.1-201ENST00000516211 143 ntBASIC3.48□□□□□ -1.85
HOXD8P13378 SCARNA17.2-201ENST00000516334 143 ntBASIC3.48□□□□□ -1.85
HOXD8P13378 RNA5SP490-201ENST00000517141 136 ntBASIC3.48□□□□□ -1.85
HOXD8P13378 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC3.48□□□□□ -1.85
HOXD8P13378 MIR4474-201ENST00000579189 78 ntBASIC3.48□□□□□ -1.85
HOXD8P13378 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC3.48□□□□□ -1.85
HOXD8P13378 SCARNA17.4-201ENST00000614296 143 ntBASIC3.48□□□□□ -1.85
HOXD8P13378 Pinc.1-201ENST00000616452 154 ntBASIC3.48□□□□□ -1.85
HOXD8P13378 AC073476.4-201ENST00000628409 72 ntBASIC3.48□□□□□ -1.85
HOXD8P13378 CADM2-AS1-201ENST00000476021 2656 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
HOXD8P13378 ATXN3-248ENST00000558190 26812 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
HOXD8P13378 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC3.48□□□□□ -1.85
HOXD8P13378 DCLRE1A-202ENST00000369305 4241 ntAPPRIS P1 TSL 5 BASIC3.48□□□□□ -1.85
HOXD8P13378 FRYL-205ENST00000503238 11103 ntAPPRIS P1 TSL 5 BASIC3.48□□□□□ -1.85
HOXD8P13378 CENPJ-205ENST00000545981 4299 ntTSL 2 BASIC3.47□□□□□ -1.85
HOXD8P13378 PLPPR4-201ENST00000370184 4505 ntTSL 5 BASIC3.47□□□□□ -1.85
HOXD8P13378 DCUN1D1-201ENST00000292782 7954 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
HOXD8P13378 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC3.47□□□□□ -1.85
HOXD8P13378 AC009487.4-201ENST00000624969 3585 ntBASIC3.47□□□□□ -1.85
HOXD8P13378 PRRG1-202ENST00000449135 4481 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
HOXD8P13378 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC3.47□□□□□ -1.85
HOXD8P13378 FOXP2-206ENST00000393491 6085 ntTSL 5 BASIC3.47□□□□□ -1.85
HOXD8P13378 WDR72-201ENST00000360509 5887 ntAPPRIS P2 TSL 1 (best) BASIC3.47□□□□□ -1.85
HOXD8P13378 SNORD58C-201ENST00000365223 64 ntBASIC3.47□□□□□ -1.85
HOXD8P13378 RNU6-117P-201ENST00000365415 107 ntBASIC3.47□□□□□ -1.85
HOXD8P13378 SNORD15B-201ENST00000384714 146 ntBASIC3.47□□□□□ -1.85
HOXD8P13378 AL603914.1-201ENST00000401964 204 ntBASIC3.47□□□□□ -1.85
HOXD8P13378 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC3.47□□□□□ -1.85
HOXD8P13378 AC097462.1-201ENST00000514125 324 ntBASIC3.47□□□□□ -1.85
HOXD8P13378 RNU2-34P-201ENST00000516534 121 ntBASIC3.47□□□□□ -1.85
HOXD8P13378 RNU6-126P-201ENST00000516685 103 ntBASIC3.47□□□□□ -1.85
HOXD8P13378 RNU1-104P-201ENST00000517280 175 ntBASIC3.47□□□□□ -1.85
HOXD8P13378 AC011604.1-201ENST00000545978 196 ntBASIC3.47□□□□□ -1.85
HOXD8P13378 AC024270.4-201ENST00000570202 421 ntTSL 3 BASIC3.47□□□□□ -1.85
HOXD8P13378 MIR4425-201ENST00000580572 84 ntBASIC3.47□□□□□ -1.85
HOXD8P13378 MIR3117-201ENST00000584034 78 ntBASIC3.47□□□□□ -1.85
HOXD8P13378 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC3.47□□□□□ -1.85
HOXD8P13378 CEP170-202ENST00000366542 6828 ntAPPRIS P1 TSL 5 BASIC3.47□□□□□ -1.85
HOXD8P13378 ARHGAP12-201ENST00000311380 4625 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
HOXD8P13378 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC3.47□□□□□ -1.85
HOXD8P13378 CCDC168-201ENST00000322527 21466 ntAPPRIS P1 TSL 3 BASIC3.46□□□□□ -1.85
HOXD8P13378 TFEC-203ENST00000393485 2704 ntTSL 2 BASIC3.46□□□□□ -1.86
HOXD8P13378 KIAA1109-203ENST00000388738 15574 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
HOXD8P13378 TDRD15-201ENST00000405799 6135 ntAPPRIS P1 TSL 2 BASIC3.46□□□□□ -1.86
HOXD8P13378 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC3.46□□□□□ -1.86
HOXD8P13378 AL021368.2-201ENST00000606125 5352 ntBASIC3.46□□□□□ -1.86
HOXD8P13378 MIR449A-201ENST00000362113 91 ntBASIC3.46□□□□□ -1.86
HOXD8P13378 RNU1-22P-201ENST00000363334 158 ntBASIC3.46□□□□□ -1.86
HOXD8P13378 RNU6-1209P-201ENST00000363655 107 ntBASIC3.46□□□□□ -1.86
HOXD8P13378 MIR1302-4-201ENST00000408701 150 ntBASIC3.46□□□□□ -1.86
HOXD8P13378 AC016909.1-201ENST00000415916 166 ntBASIC3.46□□□□□ -1.86
HOXD8P13378 AL139132.1-201ENST00000431587 344 ntBASIC3.46□□□□□ -1.86
HOXD8P13378 OR9P1P-201ENST00000496431 281 ntBASIC3.46□□□□□ -1.86
HOXD8P13378 RNU7-149P-201ENST00000516739 59 ntBASIC3.46□□□□□ -1.86
HOXD8P13378 SCARNA20.6-201ENST00000517251 106 ntBASIC3.46□□□□□ -1.86
HOXD8P13378 MIR4662B-201ENST00000579498 81 ntBASIC3.46□□□□□ -1.86
HOXD8P13378 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC3.46□□□□□ -1.86
HOXD8P13378 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC3.46□□□□□ -1.86
HOXD8P13378 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC3.46□□□□□ -1.86
HOXD8P13378 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
HOXD8P13378 TMEM232-201ENST00000455884 2501 ntAPPRIS P2 TSL 2 BASIC3.46□□□□□ -1.86
HOXD8P13378 KCNJ16-203ENST00000392671 3981 ntAPPRIS P1 TSL 2 BASIC3.46□□□□□ -1.86
HOXD8P13378 CHM-205ENST00000615443 2821 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 112.3 ms